check-standard.yaml

# For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag.
# https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions
on: [push, pull_request]
  
name: R-CMD-check
          
jobs:
  R-CMD-check:
    if: github.repository_owner == 'Azure'
    runs-on: ${{ matrix.config.os }}

    name: ${{ matrix.config.os }} (${{ matrix.config.r }})

    strategy:
      fail-fast: false
      matrix:
        config:
          - {os: windows-latest, r: 'release'}
          - {os: macOS-latest, r: 'release'}
          - {os: ubuntu-20.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}

    env:
      R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
      RSPM: ${{ matrix.config.rspm }}

    steps:
      - uses: actions/checkout@v2
        with:
          fetch-depth: 0  # required for mirroring, see https://stackoverflow.com/a/64272409/474349

      - name: Copy to Cloudyr
        if: runner.os == 'Linux' && github.ref == 'refs/heads/master'
        env:
          token: "${{ secrets.ghPat }}"
        # git config hack required, see https://stackoverflow.com/q/64270867/474349
        run: |
          export CLOUDYR_REPO=$(echo $GITHUB_REPOSITORY | sed "s/Azure/cloudyr/")
          git config -l | grep 'http\..*\.extraheader' | cut -d= -f1 | \
            xargs -L1 git config --unset-all
          git push --prune https://token:$token@github.com/${CLOUDYR_REPO}.git +refs/remotes/origin/*:refs/heads/* +refs/tags/*:refs/tags/*

      - uses: r-lib/actions/setup-r@v2
        with:
          r-version: ${{ matrix.config.r }}

      - uses: r-lib/actions/setup-pandoc@v2

      - name: Query dependencies
        run: |
          install.packages('remotes')
          saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
          writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
        shell: Rscript {0}

      - name: Cache R packages
        if: runner.os != 'Windows'
        uses: actions/cache@v2
        with:
          path: ${{ env.R_LIBS_USER }}
          key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-

      - name: Install system dependencies
        if: runner.os == 'Linux'
        run: |
          while read -r cmd
          do
            eval sudo $cmd
          done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))')

      - name: Install dependencies
        run: |
          remotes::install_deps(dependencies = TRUE)
          remotes::install_cran(c("pkgbuild", "rcmdcheck", "drat"))
        shell: Rscript {0}

      - name: Check
        env:
          _R_CHECK_CRAN_INCOMING_REMOTE_: false
          _R_CHECK_FORCE_SUGGESTS_: false
        run: |
          pkg <- pkgbuild::build()
          rcmdcheck::rcmdcheck(pkg, args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
        shell: Rscript {0}

      - name: Upload check results
        if: failure()
        uses: actions/upload-artifact@main
        with:
          name: ${{ runner.os }}-r${{ matrix.config.r }}-results
          path: check

      - name: Update Cloudyr drat
        if: success() && runner.os == 'Linux' && github.ref == 'refs/heads/master' 
        env:
          token: "${{ secrets.ghPat }}"
        run: |
          cd ..
          export PKGBUILD_GZ=$(ls *.gz)
          mkdir drat
          cd drat
          git init
          git config user.email "dummy@example.com"
          git config user.name "Github Actions"
          git remote add upstream "https://token:$token@github.com/cloudyr/cloudyr.github.io.git"
          git fetch upstream
          git checkout master
          Rscript -e "drat::insertPackage('../$PKGBUILD_GZ', repodir='./drat')"
          git add --all
          git commit -m "add $PKGBUILD_GZ (build $GITHUB_RUN_NUMBER)"
          git push