diff --git a/.doctrees/environment.pickle b/.doctrees/environment.pickle index bc562330..3f5d8851 100644 Binary files a/.doctrees/environment.pickle and b/.doctrees/environment.pickle differ diff --git a/.doctrees/index.doctree b/.doctrees/index.doctree index ef805231..7254d085 100644 Binary files a/.doctrees/index.doctree and b/.doctrees/index.doctree differ diff --git a/.doctrees/instrument/_configure_bluesky_instrument.doctree b/.doctrees/instrument/_configure_bluesky_instrument.doctree index 5d778f45..8c29f254 100644 Binary files a/.doctrees/instrument/_configure_bluesky_instrument.doctree and b/.doctrees/instrument/_configure_bluesky_instrument.doctree differ diff --git a/.doctrees/nbsphinx/tutor/_lesson1.ipynb b/.doctrees/nbsphinx/tutor/_lesson1.ipynb index e4844ec4..c7a47c8b 100644 --- a/.doctrees/nbsphinx/tutor/_lesson1.ipynb +++ b/.doctrees/nbsphinx/tutor/_lesson1.ipynb @@ -61,10 +61,10 @@ "execution_count": 1, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:30.797269Z", - "iopub.status.busy": "2024-04-28T17:45:30.796731Z", - "iopub.status.idle": "2024-04-28T17:45:30.977698Z", - "shell.execute_reply": "2024-04-28T17:45:30.977141Z" + "iopub.execute_input": "2024-04-28T18:35:45.805360Z", + "iopub.status.busy": "2024-04-28T18:35:45.805161Z", + "iopub.status.idle": "2024-04-28T18:35:45.986300Z", + "shell.execute_reply": "2024-04-28T18:35:45.985628Z" } }, "outputs": [ @@ -96,10 +96,10 @@ "execution_count": 2, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:30.980293Z", - "iopub.status.busy": "2024-04-28T17:45:30.979908Z", - "iopub.status.idle": "2024-04-28T17:45:30.992992Z", - "shell.execute_reply": "2024-04-28T17:45:30.992463Z" + "iopub.execute_input": "2024-04-28T18:35:45.988865Z", + "iopub.status.busy": "2024-04-28T18:35:45.988483Z", + "iopub.status.idle": "2024-04-28T18:35:46.000941Z", + "shell.execute_reply": "2024-04-28T18:35:46.000436Z" } }, "outputs": [ @@ -131,10 +131,10 @@ "execution_count": 3, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:30.995365Z", - "iopub.status.busy": "2024-04-28T17:45:30.995000Z", - "iopub.status.idle": "2024-04-28T17:45:31.006795Z", - "shell.execute_reply": "2024-04-28T17:45:31.006305Z" + "iopub.execute_input": "2024-04-28T18:35:46.003316Z", + "iopub.status.busy": "2024-04-28T18:35:46.002939Z", + "iopub.status.idle": "2024-04-28T18:35:46.014945Z", + "shell.execute_reply": "2024-04-28T18:35:46.014277Z" } }, "outputs": [ @@ -166,10 +166,10 @@ "execution_count": 4, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.009078Z", - "iopub.status.busy": "2024-04-28T17:45:31.008776Z", - "iopub.status.idle": "2024-04-28T17:45:31.020850Z", - "shell.execute_reply": "2024-04-28T17:45:31.020316Z" + "iopub.execute_input": "2024-04-28T18:35:46.017230Z", + "iopub.status.busy": "2024-04-28T18:35:46.017028Z", + "iopub.status.idle": "2024-04-28T18:35:46.028975Z", + "shell.execute_reply": "2024-04-28T18:35:46.028426Z" } }, "outputs": [ @@ -213,10 +213,10 @@ "execution_count": 5, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.023205Z", - "iopub.status.busy": "2024-04-28T17:45:31.022834Z", - "iopub.status.idle": "2024-04-28T17:45:31.034982Z", - "shell.execute_reply": "2024-04-28T17:45:31.034464Z" + "iopub.execute_input": "2024-04-28T18:35:46.031298Z", + "iopub.status.busy": "2024-04-28T18:35:46.031098Z", + "iopub.status.idle": "2024-04-28T18:35:46.043543Z", + "shell.execute_reply": "2024-04-28T18:35:46.042943Z" } }, "outputs": [ @@ -249,10 +249,10 @@ "execution_count": 6, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.037441Z", - "iopub.status.busy": "2024-04-28T17:45:31.037078Z", - "iopub.status.idle": "2024-04-28T17:45:31.049720Z", - "shell.execute_reply": "2024-04-28T17:45:31.049082Z" + "iopub.execute_input": "2024-04-28T18:35:46.045883Z", + "iopub.status.busy": "2024-04-28T18:35:46.045682Z", + "iopub.status.idle": "2024-04-28T18:35:46.058709Z", + "shell.execute_reply": "2024-04-28T18:35:46.058052Z" } }, "outputs": [ @@ -285,10 +285,10 @@ "execution_count": 7, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.052247Z", - "iopub.status.busy": "2024-04-28T17:45:31.051746Z", - "iopub.status.idle": "2024-04-28T17:45:31.063862Z", - "shell.execute_reply": "2024-04-28T17:45:31.063239Z" + "iopub.execute_input": "2024-04-28T18:35:46.061025Z", + "iopub.status.busy": "2024-04-28T18:35:46.060824Z", + "iopub.status.idle": "2024-04-28T18:35:46.072678Z", + "shell.execute_reply": "2024-04-28T18:35:46.072172Z" } }, "outputs": [ @@ -323,10 +323,10 @@ "execution_count": 8, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.066509Z", - "iopub.status.busy": "2024-04-28T17:45:31.066052Z", - "iopub.status.idle": "2024-04-28T17:45:31.078179Z", - "shell.execute_reply": "2024-04-28T17:45:31.077543Z" + "iopub.execute_input": "2024-04-28T18:35:46.075085Z", + "iopub.status.busy": "2024-04-28T18:35:46.074725Z", + "iopub.status.idle": "2024-04-28T18:35:46.086401Z", + "shell.execute_reply": "2024-04-28T18:35:46.085799Z" } }, "outputs": [ @@ -358,10 +358,10 @@ "execution_count": 9, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.080602Z", - "iopub.status.busy": "2024-04-28T17:45:31.080198Z", - "iopub.status.idle": "2024-04-28T17:45:31.093080Z", - "shell.execute_reply": "2024-04-28T17:45:31.092532Z" + "iopub.execute_input": "2024-04-28T18:35:46.088809Z", + "iopub.status.busy": "2024-04-28T18:35:46.088452Z", + "iopub.status.idle": "2024-04-28T18:35:46.100977Z", + "shell.execute_reply": "2024-04-28T18:35:46.100364Z" } }, "outputs": [ @@ -393,10 +393,10 @@ "execution_count": 10, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.095365Z", - "iopub.status.busy": "2024-04-28T17:45:31.094998Z", - "iopub.status.idle": "2024-04-28T17:45:31.126395Z", - "shell.execute_reply": "2024-04-28T17:45:31.125754Z" + "iopub.execute_input": "2024-04-28T18:35:46.103315Z", + "iopub.status.busy": "2024-04-28T18:35:46.103116Z", + "iopub.status.idle": "2024-04-28T18:35:46.134952Z", + "shell.execute_reply": "2024-04-28T18:35:46.134400Z" } }, "outputs": [ @@ -428,10 +428,10 @@ "execution_count": 11, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.129026Z", - "iopub.status.busy": "2024-04-28T17:45:31.128651Z", - "iopub.status.idle": "2024-04-28T17:45:31.141263Z", - "shell.execute_reply": "2024-04-28T17:45:31.140724Z" + "iopub.execute_input": "2024-04-28T18:35:46.137163Z", + "iopub.status.busy": "2024-04-28T18:35:46.136964Z", + "iopub.status.idle": "2024-04-28T18:35:46.149184Z", + "shell.execute_reply": "2024-04-28T18:35:46.148636Z" } }, "outputs": [ @@ -463,10 +463,10 @@ "execution_count": 12, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.143643Z", - "iopub.status.busy": "2024-04-28T17:45:31.143265Z", - "iopub.status.idle": "2024-04-28T17:45:31.155051Z", - "shell.execute_reply": "2024-04-28T17:45:31.154454Z" + "iopub.execute_input": "2024-04-28T18:35:46.151589Z", + "iopub.status.busy": "2024-04-28T18:35:46.151235Z", + "iopub.status.idle": "2024-04-28T18:35:46.163087Z", + "shell.execute_reply": "2024-04-28T18:35:46.162470Z" } }, "outputs": [ @@ -502,10 +502,10 @@ "execution_count": 13, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.157652Z", - "iopub.status.busy": "2024-04-28T17:45:31.157288Z", - "iopub.status.idle": "2024-04-28T17:45:31.169791Z", - "shell.execute_reply": "2024-04-28T17:45:31.169238Z" + "iopub.execute_input": "2024-04-28T18:35:46.165583Z", + "iopub.status.busy": "2024-04-28T18:35:46.165222Z", + "iopub.status.idle": "2024-04-28T18:35:46.177304Z", + "shell.execute_reply": "2024-04-28T18:35:46.176758Z" } }, "outputs": [ @@ -538,10 +538,10 @@ "execution_count": 14, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.172121Z", - "iopub.status.busy": "2024-04-28T17:45:31.171742Z", - "iopub.status.idle": "2024-04-28T17:45:31.183743Z", - "shell.execute_reply": "2024-04-28T17:45:31.183132Z" + "iopub.execute_input": "2024-04-28T18:35:46.179648Z", + "iopub.status.busy": "2024-04-28T18:35:46.179275Z", + "iopub.status.idle": "2024-04-28T18:35:46.191103Z", + "shell.execute_reply": "2024-04-28T18:35:46.190430Z" } }, "outputs": [ @@ -573,10 +573,10 @@ "execution_count": 15, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.186187Z", - "iopub.status.busy": "2024-04-28T17:45:31.185823Z", - "iopub.status.idle": "2024-04-28T17:45:31.198011Z", - "shell.execute_reply": "2024-04-28T17:45:31.197409Z" + "iopub.execute_input": "2024-04-28T18:35:46.193751Z", + "iopub.status.busy": "2024-04-28T18:35:46.193203Z", + "iopub.status.idle": "2024-04-28T18:35:46.206481Z", + "shell.execute_reply": "2024-04-28T18:35:46.205798Z" } }, "outputs": [ @@ -619,10 +619,10 @@ "execution_count": 16, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.200495Z", - "iopub.status.busy": "2024-04-28T17:45:31.199992Z", - "iopub.status.idle": "2024-04-28T17:45:31.203031Z", - "shell.execute_reply": "2024-04-28T17:45:31.202422Z" + "iopub.execute_input": "2024-04-28T18:35:46.209329Z", + "iopub.status.busy": "2024-04-28T18:35:46.208832Z", + "iopub.status.idle": "2024-04-28T18:35:46.212023Z", + "shell.execute_reply": "2024-04-28T18:35:46.211488Z" } }, "outputs": [], @@ -636,10 +636,10 @@ "execution_count": 17, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.205455Z", - "iopub.status.busy": "2024-04-28T17:45:31.205112Z", - "iopub.status.idle": "2024-04-28T17:45:31.217796Z", - "shell.execute_reply": "2024-04-28T17:45:31.217184Z" + "iopub.execute_input": "2024-04-28T18:35:46.214554Z", + "iopub.status.busy": "2024-04-28T18:35:46.214154Z", + "iopub.status.idle": "2024-04-28T18:35:46.228383Z", + "shell.execute_reply": "2024-04-28T18:35:46.227786Z" } }, "outputs": [ @@ -671,10 +671,10 @@ "execution_count": 18, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.220269Z", - "iopub.status.busy": "2024-04-28T17:45:31.219905Z", - "iopub.status.idle": "2024-04-28T17:45:31.223165Z", - "shell.execute_reply": "2024-04-28T17:45:31.222576Z" + "iopub.execute_input": "2024-04-28T18:35:46.230842Z", + "iopub.status.busy": "2024-04-28T18:35:46.230629Z", + "iopub.status.idle": "2024-04-28T18:35:46.234131Z", + "shell.execute_reply": "2024-04-28T18:35:46.233579Z" } }, "outputs": [], @@ -691,10 +691,10 @@ "execution_count": 19, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.225468Z", - "iopub.status.busy": "2024-04-28T17:45:31.225117Z", - "iopub.status.idle": "2024-04-28T17:45:31.237057Z", - "shell.execute_reply": "2024-04-28T17:45:31.236466Z" + "iopub.execute_input": "2024-04-28T18:35:46.236232Z", + "iopub.status.busy": "2024-04-28T18:35:46.236037Z", + "iopub.status.idle": "2024-04-28T18:35:46.249130Z", + "shell.execute_reply": "2024-04-28T18:35:46.248589Z" } }, "outputs": [ @@ -736,10 +736,10 @@ "execution_count": 20, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:31.239521Z", - "iopub.status.busy": "2024-04-28T17:45:31.239027Z", - "iopub.status.idle": "2024-04-28T17:45:31.251153Z", - "shell.execute_reply": "2024-04-28T17:45:31.250632Z" + "iopub.execute_input": "2024-04-28T18:35:46.251613Z", + "iopub.status.busy": "2024-04-28T18:35:46.251247Z", + "iopub.status.idle": "2024-04-28T18:35:46.264187Z", + "shell.execute_reply": "2024-04-28T18:35:46.263606Z" } }, "outputs": [ diff --git a/.doctrees/nbsphinx/tutor/_lesson3a.ipynb b/.doctrees/nbsphinx/tutor/_lesson3a.ipynb index 3cb67d0f..73ea3fc4 100644 --- a/.doctrees/nbsphinx/tutor/_lesson3a.ipynb +++ b/.doctrees/nbsphinx/tutor/_lesson3a.ipynb @@ -23,10 +23,10 @@ "execution_count": 1, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.389980Z", - "iopub.status.busy": "2024-04-28T17:45:34.389464Z", - "iopub.status.idle": "2024-04-28T17:45:34.570949Z", - "shell.execute_reply": "2024-04-28T17:45:34.570387Z" + "iopub.execute_input": "2024-04-28T18:35:49.562930Z", + "iopub.status.busy": "2024-04-28T18:35:49.562473Z", + "iopub.status.idle": "2024-04-28T18:35:49.744971Z", + "shell.execute_reply": "2024-04-28T18:35:49.744406Z" } }, "outputs": [ @@ -62,10 +62,10 @@ "execution_count": 2, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.573647Z", - "iopub.status.busy": "2024-04-28T17:45:34.573178Z", - "iopub.status.idle": "2024-04-28T17:45:34.588858Z", - "shell.execute_reply": "2024-04-28T17:45:34.588338Z" + "iopub.execute_input": "2024-04-28T18:35:49.747452Z", + "iopub.status.busy": "2024-04-28T18:35:49.747071Z", + "iopub.status.idle": "2024-04-28T18:35:49.762002Z", + "shell.execute_reply": "2024-04-28T18:35:49.761457Z" } }, "outputs": [ @@ -101,10 +101,10 @@ "execution_count": 3, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.591090Z", - "iopub.status.busy": "2024-04-28T17:45:34.590898Z", - "iopub.status.idle": "2024-04-28T17:45:34.604748Z", - "shell.execute_reply": "2024-04-28T17:45:34.604185Z" + "iopub.execute_input": "2024-04-28T18:35:49.764342Z", + "iopub.status.busy": "2024-04-28T18:35:49.763979Z", + "iopub.status.idle": "2024-04-28T18:35:49.777740Z", + "shell.execute_reply": "2024-04-28T18:35:49.777071Z" } }, "outputs": [ @@ -149,10 +149,10 @@ "execution_count": 4, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.606979Z", - "iopub.status.busy": "2024-04-28T17:45:34.606787Z", - "iopub.status.idle": "2024-04-28T17:45:34.618576Z", - "shell.execute_reply": "2024-04-28T17:45:34.618084Z" + "iopub.execute_input": "2024-04-28T18:35:49.780165Z", + "iopub.status.busy": "2024-04-28T18:35:49.779720Z", + "iopub.status.idle": "2024-04-28T18:35:49.791656Z", + "shell.execute_reply": "2024-04-28T18:35:49.790999Z" } }, "outputs": [ @@ -184,10 +184,10 @@ "execution_count": 5, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.621123Z", - "iopub.status.busy": "2024-04-28T17:45:34.620629Z", - "iopub.status.idle": "2024-04-28T17:45:34.633840Z", - "shell.execute_reply": "2024-04-28T17:45:34.633300Z" + "iopub.execute_input": "2024-04-28T18:35:49.794030Z", + "iopub.status.busy": "2024-04-28T18:35:49.793677Z", + "iopub.status.idle": "2024-04-28T18:35:49.805951Z", + "shell.execute_reply": "2024-04-28T18:35:49.805312Z" } }, "outputs": [ @@ -221,10 +221,10 @@ "execution_count": 6, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.636288Z", - "iopub.status.busy": "2024-04-28T17:45:34.635883Z", - "iopub.status.idle": "2024-04-28T17:45:34.649073Z", - "shell.execute_reply": "2024-04-28T17:45:34.648407Z" + "iopub.execute_input": "2024-04-28T18:35:49.808247Z", + "iopub.status.busy": "2024-04-28T18:35:49.807890Z", + "iopub.status.idle": "2024-04-28T18:35:49.820340Z", + "shell.execute_reply": "2024-04-28T18:35:49.819832Z" } }, "outputs": [ @@ -266,10 +266,10 @@ "execution_count": 7, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.651737Z", - "iopub.status.busy": "2024-04-28T17:45:34.651248Z", - "iopub.status.idle": "2024-04-28T17:45:34.822835Z", - "shell.execute_reply": "2024-04-28T17:45:34.822142Z" + "iopub.execute_input": "2024-04-28T18:35:49.822765Z", + "iopub.status.busy": "2024-04-28T18:35:49.822326Z", + "iopub.status.idle": "2024-04-28T18:35:49.988232Z", + "shell.execute_reply": "2024-04-28T18:35:49.987561Z" } }, "outputs": [ @@ -307,10 +307,10 @@ "execution_count": 8, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.825337Z", - "iopub.status.busy": "2024-04-28T17:45:34.825134Z", - "iopub.status.idle": "2024-04-28T17:45:34.838199Z", - "shell.execute_reply": "2024-04-28T17:45:34.837656Z" + "iopub.execute_input": "2024-04-28T18:35:49.990928Z", + "iopub.status.busy": "2024-04-28T18:35:49.990543Z", + "iopub.status.idle": "2024-04-28T18:35:50.003063Z", + "shell.execute_reply": "2024-04-28T18:35:50.002534Z" } }, "outputs": [ @@ -342,10 +342,10 @@ "execution_count": 9, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.840575Z", - "iopub.status.busy": "2024-04-28T17:45:34.840176Z", - "iopub.status.idle": "2024-04-28T17:45:34.852956Z", - "shell.execute_reply": "2024-04-28T17:45:34.852404Z" + "iopub.execute_input": "2024-04-28T18:35:50.005619Z", + "iopub.status.busy": "2024-04-28T18:35:50.005193Z", + "iopub.status.idle": "2024-04-28T18:35:50.017913Z", + "shell.execute_reply": "2024-04-28T18:35:50.017358Z" } }, "outputs": [ @@ -377,10 +377,10 @@ "execution_count": 10, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.855216Z", - "iopub.status.busy": "2024-04-28T17:45:34.854921Z", - "iopub.status.idle": "2024-04-28T17:45:34.867720Z", - "shell.execute_reply": "2024-04-28T17:45:34.867187Z" + "iopub.execute_input": "2024-04-28T18:35:50.020393Z", + "iopub.status.busy": "2024-04-28T18:35:50.020026Z", + "iopub.status.idle": "2024-04-28T18:35:50.032652Z", + "shell.execute_reply": "2024-04-28T18:35:50.032126Z" } }, "outputs": [ @@ -415,10 +415,10 @@ "execution_count": 11, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.869965Z", - "iopub.status.busy": "2024-04-28T17:45:34.869615Z", - "iopub.status.idle": "2024-04-28T17:45:34.881856Z", - "shell.execute_reply": "2024-04-28T17:45:34.881344Z" + "iopub.execute_input": "2024-04-28T18:35:50.035016Z", + "iopub.status.busy": "2024-04-28T18:35:50.034643Z", + "iopub.status.idle": "2024-04-28T18:35:50.047120Z", + "shell.execute_reply": "2024-04-28T18:35:50.046562Z" } }, "outputs": [ @@ -450,10 +450,10 @@ "execution_count": 12, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.883981Z", - "iopub.status.busy": "2024-04-28T17:45:34.883790Z", - "iopub.status.idle": "2024-04-28T17:45:34.896791Z", - "shell.execute_reply": "2024-04-28T17:45:34.896158Z" + "iopub.execute_input": "2024-04-28T18:35:50.049512Z", + "iopub.status.busy": "2024-04-28T18:35:50.049094Z", + "iopub.status.idle": "2024-04-28T18:35:50.061499Z", + "shell.execute_reply": "2024-04-28T18:35:50.060808Z" } }, "outputs": [ @@ -487,10 +487,10 @@ "execution_count": 13, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.899265Z", - "iopub.status.busy": "2024-04-28T17:45:34.898893Z", - "iopub.status.idle": "2024-04-28T17:45:34.911262Z", - "shell.execute_reply": "2024-04-28T17:45:34.910760Z" + "iopub.execute_input": "2024-04-28T18:35:50.064263Z", + "iopub.status.busy": "2024-04-28T18:35:50.063842Z", + "iopub.status.idle": "2024-04-28T18:35:50.076287Z", + "shell.execute_reply": "2024-04-28T18:35:50.075773Z" } }, "outputs": [ @@ -522,10 +522,10 @@ "execution_count": 14, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.913553Z", - "iopub.status.busy": "2024-04-28T17:45:34.913202Z", - "iopub.status.idle": "2024-04-28T17:45:34.925169Z", - "shell.execute_reply": "2024-04-28T17:45:34.924559Z" + "iopub.execute_input": "2024-04-28T18:35:50.078546Z", + "iopub.status.busy": "2024-04-28T18:35:50.078350Z", + "iopub.status.idle": "2024-04-28T18:35:50.090485Z", + "shell.execute_reply": "2024-04-28T18:35:50.089840Z" } }, "outputs": [ @@ -564,10 +564,10 @@ "execution_count": 15, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.927639Z", - "iopub.status.busy": "2024-04-28T17:45:34.927273Z", - "iopub.status.idle": "2024-04-28T17:45:34.939423Z", - "shell.execute_reply": "2024-04-28T17:45:34.938902Z" + "iopub.execute_input": "2024-04-28T18:35:50.093083Z", + "iopub.status.busy": "2024-04-28T18:35:50.092708Z", + "iopub.status.idle": "2024-04-28T18:35:50.105135Z", + "shell.execute_reply": "2024-04-28T18:35:50.104605Z" } }, "outputs": [ @@ -601,10 +601,10 @@ "execution_count": 16, "metadata": { "execution": { - "iopub.execute_input": "2024-04-28T17:45:34.941739Z", - "iopub.status.busy": "2024-04-28T17:45:34.941362Z", - "iopub.status.idle": "2024-04-28T17:45:34.953929Z", - "shell.execute_reply": "2024-04-28T17:45:34.953399Z" + "iopub.execute_input": "2024-04-28T18:35:50.107384Z", + "iopub.status.busy": "2024-04-28T18:35:50.107081Z", + "iopub.status.idle": "2024-04-28T18:35:50.119927Z", + "shell.execute_reply": "2024-04-28T18:35:50.119315Z" }, "scrolled": true }, diff --git a/_sources/instrument/_configure_bluesky_instrument.rst.txt b/_sources/instrument/_configure_bluesky_instrument.rst.txt index 45912481..12f2dbc1 100644 --- a/_sources/instrument/_configure_bluesky_instrument.rst.txt +++ b/_sources/instrument/_configure_bluesky_instrument.rst.txt @@ -3,7 +3,7 @@ Configure bluesky instrument ============================ -After the steps in the "ref"`checklist` are complete, it is time to configure +After the steps in the :ref:`checklist` are complete, it is time to configure the instrument for the details of this specific user. Settings for various aspects of data collection are distributed amongst the many diff --git a/index.html b/index.html index 3f9bc8a0..261c42d0 100644 --- a/index.html +++ b/index.html @@ -459,7 +459,7 @@
2024-04-28 12:45
+2024-04-28 13:35
After the steps in the “ref”checklist are complete, it is time to configure +
After the steps in the Installation checklist are complete, it is time to configure the instrument for the details of this specific user.
Settings for various aspects of data collection are distributed amongst the many
directories and files of the instrument/
subdirectory. This directory is
diff --git a/searchindex.js b/searchindex.js
index ef3c6289..193c86b0 100644
--- a/searchindex.js
+++ b/searchindex.js
@@ -1 +1 @@
-Search.setIndex({"docnames": ["changes", "example/_busy_fly_scan", "example/_export_bluesky_data", "example/_export_to_csv", "example/_specwriter", "example/_watch_temperature", "example/_xafs_scan", "example/index", "howto/_after_measurement", "howto/_basic_aps_info", "howto/_basic_motor_scaler_scan", "howto/_bluesky_queueserver", "howto/_count_scaler", "howto/_custom_heater_positioner", "howto/_custom_plan", "howto/_doodle", "howto/_dynamic_limits_2motor", "howto/_images_darks_flats", "howto/_lineup_1d_peak", "howto/_locate_image_peak", "howto/_plot_x_y_databroker", "howto/_synapps_busy", "howto/_synapps_sscan_1d_flyer", "howto/_temperature_controller_swait", "howto/bluesky_cheat_sheet", "howto/getting_started", "howto/index", "index", "instrument/_about_init_files", "instrument/_activate_environment", "instrument/_configure_bluesky_instrument", "instrument/_configure_databroker", "instrument/_create_bluesky_directory", "instrument/_create_bluesky_ipython_profile", "instrument/_create_starter_softlink", "instrument/_get_spec_config", "instrument/_setup_catalog_configuration", "instrument/_start_version_control", "instrument/_test_bluesky_at_aps", "instrument/_test_initial_installation", "instrument/_test_new_instrument", "instrument/describe_instrument", "instrument/guide", "instrument/index", "instrument/install_new_instrument", "reference/_FAQ", "reference/_aps_data_management", "reference/_create_conda_env", "reference/_git-help", "reference/_intro2bluesky", "reference/_ipython", "reference/_zz_other_resources", "reference/index", "tutor/_aps101_notes", "tutor/_basic_a", "tutor/_basic_b", "tutor/_basic_c", "tutor/_command_review", "tutor/_custom_device", "tutor/_lesson1", "tutor/_lesson2", "tutor/_lesson3a", "tutor/_lesson3b", "tutor/_lesson4", "tutor/_lesson5a", "tutor/_lesson5b", "tutor/_lesson6", "tutor/_lesson7", "tutor/connect_epics", "tutor/hello_world", "tutor/index"], "filenames": ["changes.rst", "example/_busy_fly_scan.ipynb", "example/_export_bluesky_data.md", "example/_export_to_csv.ipynb", "example/_specwriter.ipynb", "example/_watch_temperature.ipynb", "example/_xafs_scan.ipynb", "example/index.rst", "howto/_after_measurement.ipynb", "howto/_basic_aps_info.ipynb", "howto/_basic_motor_scaler_scan.ipynb", "howto/_bluesky_queueserver.md", "howto/_count_scaler.ipynb", "howto/_custom_heater_positioner.ipynb", "howto/_custom_plan.ipynb", "howto/_doodle.ipynb", "howto/_dynamic_limits_2motor.ipynb", "howto/_images_darks_flats.ipynb", "howto/_lineup_1d_peak.ipynb", "howto/_locate_image_peak.ipynb", "howto/_plot_x_y_databroker.ipynb", "howto/_synapps_busy.ipynb", "howto/_synapps_sscan_1d_flyer.ipynb", "howto/_temperature_controller_swait.ipynb", "howto/bluesky_cheat_sheet.md", "howto/getting_started.md", "howto/index.rst", "index.rst", "instrument/_about_init_files.md", "instrument/_activate_environment.rst", "instrument/_configure_bluesky_instrument.rst", "instrument/_configure_databroker.md", "instrument/_create_bluesky_directory.rst", "instrument/_create_bluesky_ipython_profile.rst", "instrument/_create_starter_softlink.rst", "instrument/_get_spec_config.md", "instrument/_setup_catalog_configuration.rst", "instrument/_start_version_control.rst", "instrument/_test_bluesky_at_aps.md", "instrument/_test_initial_installation.rst", "instrument/_test_new_instrument.md", "instrument/describe_instrument.ipynb", "instrument/guide.md", "instrument/index.rst", "instrument/install_new_instrument.rst", "reference/_FAQ.rst", "reference/_aps_data_management.md", "reference/_create_conda_env.rst", "reference/_git-help.rst", "reference/_intro2bluesky.md", "reference/_ipython.rst", "reference/_zz_other_resources.rst", "reference/index.rst", "tutor/_aps101_notes.md", "tutor/_basic_a.ipynb", "tutor/_basic_b.ipynb", "tutor/_basic_c.ipynb", "tutor/_command_review.ipynb", "tutor/_custom_device.rst", "tutor/_lesson1.ipynb", "tutor/_lesson2.ipynb", "tutor/_lesson3a.ipynb", "tutor/_lesson3b.ipynb", "tutor/_lesson4.ipynb", "tutor/_lesson5a.ipynb", "tutor/_lesson5b.ipynb", "tutor/_lesson6.ipynb", "tutor/_lesson7.ipynb", "tutor/connect_epics.ipynb", "tutor/hello_world.ipynb", "tutor/index.rst"], "titles": ["Changes", "APS fly scans with taxi & fly busy
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record", "Bluesky Cheat Sheet", "Getting started", "How-To Guides", "APS Bluesky Training", "Python __init__.py
files", "Activate the bluesky conda environment", "Configure bluesky instrument", "Setup your databroker catalog configuration", "Create bluesky directory", "Create a bluesky IPython profile", "Create a File System Soft Link", "Translate Previous SPEC Configuration", "Setup catalog configuration for databroker", "Start software version control", "Test that Bluesky Works at APS", "Test the new bluesky instrument", "Test the New Bluesky Instrument", "The instrument
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57, 59, 60, 61, 62, 63, 64, 66, 67], "compon": [1, 13, 15, 16, 17, 21, 41, 42, 58, 66, 67, 69, 70], "devic": [1, 5, 6, 9, 10, 12, 13, 14, 16, 18, 19, 21, 22, 26, 35, 38, 40, 41, 43, 49, 53, 54, 55, 56, 57, 59, 60, 61, 62, 64, 65, 66, 69, 70], "signal": [1, 4, 6, 13, 16, 17, 18, 19, 21, 22, 23, 24, 26, 41, 42, 49, 54, 55, 56, 57, 58, 59, 60, 61, 64, 66], "getlogg": [1, 21], "setlevel": [1, 21], "info": [1, 6, 10, 11, 14, 16, 21, 22, 24, 32, 33, 37, 41, 44, 47, 49], "re": [1, 4, 5, 6, 8, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 35, 43, 45, 54, 55, 56, 57, 59, 60, 61, 62, 63, 64, 65, 66, 67, 69], "cat": [1, 2, 3, 5, 8, 10, 11, 12, 15, 16, 17, 18, 19, 20, 21, 22, 33, 69], "temp": [1, 17, 21, 40, 69], "v2": [1, 8, 10, 12, 14, 17, 58, 69], "v1": [1, 10, 16, 17, 21, 41, 58, 69], "insert": [1, 10, 17, 21, 24, 69], "f": [1, 2, 3, 4, 6, 8, 10, 12, 13, 15, 16, 17, 18, 20, 21, 22, 23, 41, 42, 47, 55, 56, 61, 62, 64, 66, 68], "lt": [1, 3, 5, 6, 8, 9, 10, 12, 14, 16, 17, 18, 19, 20, 22, 41, 57, 63, 64, 65, 66, 67, 69], "intak": [1, 8, 10, 31, 41], "gt": [1, 3, 5, 6, 8, 9, 12, 13, 14, 16, 17, 18, 19, 20, 22, 41, 57, 59, 61, 63, 64, 65, 66, 67, 69], "provid": [1, 2, 5, 6, 10, 12, 15, 16, 17, 18, 20, 21, 22, 23, 30, 32, 37, 38, 41, 42, 45, 48, 49, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 64, 66, 67], "gp": [1, 4, 5, 8, 10, 12, 13, 16, 18, 21, 22, 23, 30, 41, 53, 54, 55, 56, 57, 58, 62, 68], "can": [1, 2, 3, 5, 6, 9, 10, 11, 12, 13, 15, 16, 17, 18, 20, 22, 23, 24, 28, 30, 31, 32, 33, 34, 36, 37, 38, 40, 41, 42, 45, 47, 49, 53, 54, 55, 56, 58, 59, 60, 61, 62, 64, 66, 67, 68, 69], "gener": [1, 4, 5, 6, 8, 10, 11, 12, 14, 15, 16, 18, 19, 20, 21, 22, 23, 24, 30, 41, 42, 47, 53, 54, 55, 56, 57, 58, 60, 62, 63, 64, 65, 66, 67, 69], "purpos": [1, 2, 6, 10, 11, 21, 22, 31, 36, 41, 47, 53], "mybusy1": [1, 21], "mybusy2": [1, 21], "subclass": [1, 15, 22, 41, 42, 58], "coordin": [1, 2, 3, 6, 8, 11, 12, 17, 19, 20, 22, 42, 49, 67, 69], "both": [1, 9, 12, 13, 16, 17, 18, 19, 21, 23, 28, 31, 37, 41, 53, 56, 58, 61, 64, 68], "class": [1, 2, 10, 13, 15, 16, 17, 21, 22, 23, 41, 42, 49, 52, 57, 58, 66, 67, 68, 69, 70], "interfac": [1, 10, 12, 15, 22, 26, 34, 41, 45, 49, 50, 66, 67], "mybusyrecord": 1, "redefin": [1, 67], "advis": 1, "tutori": [1, 6, 10, 14, 20, 23, 25, 26, 27, 40, 43, 45, 48, 53, 54, 55, 56, 58, 59, 60, 61, 62, 64, 66], "A": [1, 2, 3, 5, 6, 10, 13, 16, 17, 20, 21, 22, 23, 26, 30, 41, 42, 45, 47, 49, 50, 53, 55, 56, 57, 58, 59, 60, 62, 66, 67, 70], "devicestatu": [1, 15, 21, 22], "monitor": [1, 9, 10, 16, 18, 22, 23, 26, 49, 68], "progress": [1, 6, 10, 13, 16, 22, 41, 56, 57, 61, 66], "ident": 1, "taxi_fly_plan": 1, "note": [1, 2, 5, 6, 9, 10, 11, 12, 13, 15, 17, 19, 22, 23, 24, 30, 33, 37, 41, 42, 45, 47, 54, 55, 56, 58, 59, 60, 61, 62, 66, 67, 68, 69, 70], "It": [1, 2, 5, 10, 12, 13, 16, 18, 22, 23, 25, 28, 30, 34, 37, 41, 42, 43, 47, 49, 54, 55, 56, 58, 59, 60, 61, 64, 66, 67, 68], "should": [1, 2, 3, 10, 12, 13, 16, 17, 19, 23, 30, 32, 40, 42, 45, 46, 48, 53, 54, 55, 58, 59, 60, 62, 64, 66], "doe": [1, 2, 5, 10, 12, 15, 16, 17, 23, 30, 31, 34, 40, 41, 42, 47, 52, 53, 54, 58, 59, 63, 64, 66, 67, 69], "ani": [1, 2, 3, 8, 9, 10, 11, 12, 13, 16, 17, 22, 23, 25, 28, 30, 31, 32, 33, 34, 41, 42, 45, 46, 47, 48, 54, 56, 57, 59, 61, 63, 64, 66, 67, 69], "As": [1, 3, 10, 12, 16, 22, 26, 32, 41, 43, 49, 64, 66, 68], "consid": [1, 2, 10, 14, 16, 22, 29, 42, 43, 58, 66], "which": [1, 2, 5, 6, 8, 10, 12, 13, 16, 17, 19, 21, 22, 23, 28, 30, 31, 33, 37, 41, 42, 45, 47, 54, 56, 58, 61, 62, 64, 67, 68, 69], "open": [1, 2, 3, 11, 14, 17, 29, 31, 32, 33, 37, 45, 47, 53], "read": [1, 2, 3, 5, 9, 10, 11, 12, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 26, 38, 41, 48, 52, 53, 54, 55, 56, 59, 60, 61, 66, 68, 69, 70], "one": [1, 2, 5, 6, 7, 8, 10, 12, 15, 16, 17, 19, 21, 22, 23, 24, 30, 31, 34, 38, 41, 42, 47, 54, 55, 58, 59, 60, 64, 66, 67], "more": [1, 2, 5, 6, 8, 9, 10, 12, 13, 14, 17, 18, 20, 22, 24, 25, 26, 27, 33, 37, 38, 40, 41, 42, 43, 44, 45, 47, 50, 53, 54, 56, 57, 58, 59, 61, 64, 66, 67, 68, 69, 70], "2": [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 17, 21, 22, 23, 24, 26, 38, 40, 41, 42, 43, 45, 47, 49, 53, 54, 55, 56, 57, 58, 59, 61, 62, 63, 65, 66, 68, 69, 70], "timeout": [1, 4, 8, 15, 16, 41, 55, 60, 67], "valu": [1, 3, 4, 5, 6, 8, 9, 10, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 38, 41, 42, 54, 55, 56, 57, 58, 59, 60, 61, 66, 67, 68], "10": [1, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 38, 40, 41, 42, 54, 55, 56, 57, 58, 59, 61, 62, 63, 64, 65, 66, 67, 68, 69], "kind": [1, 2, 6, 13, 17, 21, 23, 24, 41, 54, 58, 59, 66, 67, 70], "config": [1, 9, 11, 13, 17, 24, 30, 35, 38, 41, 47, 50, 57, 58], "def": [1, 3, 4, 6, 10, 13, 14, 15, 16, 17, 20, 21, 22, 23, 24, 54, 55, 57, 59, 60, 61, 66, 67], "self": [1, 15, 16, 19, 21, 22, 53, 61, 66, 67], "statu": [1, 9, 10, 15, 17, 21, 22], "wait": [1, 5, 10, 11, 12, 13, 14, 16, 17, 21, 22, 23, 24, 26, 38, 54, 57, 59, 64, 68], "true": [1, 4, 5, 6, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 30, 38, 40, 41, 42, 57, 58, 63, 64, 66, 67, 68], "executing_valu": 1, "state": [1, 5, 6, 9, 12, 13, 14, 16, 17, 18, 19, 21, 22, 25, 40, 41, 42, 57, 63, 64, 66, 67], "enum_str": [1, 5, 17, 54, 55, 60, 66, 68], "watch_stat": 1, "old_valu": [1, 21], "kwarg": [1, 5, 10, 11, 17, 21, 22, 58, 61, 67], "when": [1, 5, 6, 9, 10, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 32, 33, 40, 41, 42, 47, 48, 50, 54, 56, 57, 58, 59, 61, 63, 64, 65, 66, 67, 68, 69], "finish": [1, 13, 14, 17, 21, 22, 26, 47, 58], "chang": [1, 5, 6, 9, 10, 12, 13, 14, 16, 17, 18, 19, 21, 22, 27, 29, 30, 31, 33, 40, 41, 42, 45, 47, 54, 55, 57, 58, 59, 60, 63, 64, 65, 66, 67, 68], "0": [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 38, 41, 42, 47, 54, 55, 56, 57, 58, 59, 60, 61, 63, 64, 65, 66, 67, 68, 69], "set_finish": [1, 17, 21, 22], "clear_sub": [1, 21], "push": [1, 13, 17, 37, 48], "put": [1, 5, 10, 13, 15, 16, 17, 21, 23, 24, 50, 54, 55, 56, 57, 59, 60, 61, 66, 68], "number": [1, 6, 9, 10, 12, 13, 16, 17, 18, 19, 22, 24, 41, 42, 45, 54, 55, 56, 58, 60, 61, 64, 66, 67, 68, 69], "text": [1, 3, 10, 13, 14, 17, 20, 22, 23, 30, 33, 42, 47, 49, 53, 54, 58, 68, 69], "differ": [1, 3, 5, 6, 9, 12, 13, 15, 16, 19, 23, 24, 26, 29, 32, 38, 41, 42, 47, 49, 53, 57, 58, 64, 66, 67, 68], "ca": [1, 12, 23, 41, 62], "And": [1, 6], "caller": [1, 6, 14], "tell": [1, 2, 11, 16, 17, 22, 32, 38, 54, 56, 59, 61, 64, 66, 68], "action": [1, 10, 12, 26, 27, 42, 58], "taxiflyscandevic": 1, "yield": [1, 4, 6, 10, 13, 14, 16, 17, 21, 22, 24, 57], "summari": [1, 2, 9, 13, 26, 38, 41, 67, 69, 70], "sseq": 1, "do": [1, 2, 3, 5, 6, 8, 10, 12, 13, 14, 15, 16, 17, 19, 22, 27, 33, 37, 41, 42, 47, 48, 55, 56, 58, 60, 61, 64, 66, 67], "its": [1, 3, 5, 6, 9, 10, 12, 14, 15, 16, 17, 18, 19, 22, 23, 40, 41, 42, 45, 46, 47, 54, 56, 57, 58, 59, 61, 63, 64, 65, 66, 67, 68, 69], "assign": [1, 10, 13, 16, 20, 31, 36, 41, 42, 69], "turn": [1, 2, 13, 66], "off": [1, 4, 9, 13, 17, 55, 60, 66, 67, 68], "veri": [1, 2, 17, 23, 42, 54, 56, 58, 59, 61, 64, 67], "limit": [1, 8, 10, 18, 23, 24, 26, 41, 54, 57, 67, 68], "task": [1, 10, 27, 47], "report": [1, 5, 6, 10, 12, 13, 14, 16, 18, 19, 21, 22, 23, 25, 40, 41, 42, 47, 56, 57, 61, 66, 67, 68], "either": [1, 2, 6, 9, 10, 13, 16, 41, 48, 58, 68], "done": [1, 7, 10, 13, 15, 16, 17, 21, 22, 23, 24, 41, 55, 57, 60, 66], "concern": [1, 27, 45], "quit": [1, 19, 70], "simpl": [1, 2, 10, 12, 15, 23, 33, 34, 42, 47, 56, 61, 64, 66, 70], "boolean": [1, 13, 16], "indic": [1, 16, 19, 21, 45, 64], "still": [1, 5, 15, 16, 22, 38, 47, 54, 59, 66], "activ": [1, 5, 6, 9, 10, 11, 12, 14, 16, 18, 19, 22, 25, 30, 33, 40, 41, 42, 43, 44, 52, 54, 57, 59, 63, 64, 66, 67, 69], "set": [1, 2, 4, 5, 6, 12, 13, 14, 15, 16, 17, 21, 22, 23, 24, 30, 37, 38, 41, 42, 43, 45, 46, 47, 49, 56, 57, 58, 61, 64, 66, 68, 69, 70], "back": [1, 10, 13, 16, 22, 47, 54, 59, 67], "usercalc": [1, 6, 16, 23], "swait": [1, 5, 13, 16, 18, 22, 26, 41], "might": [1, 2, 3, 6, 7, 9, 11, 12, 16, 30, 31, 38, 41, 42, 56, 57, 58, 66], "programm": 1, "could": [1, 6, 10, 12, 13, 25, 38, 41, 42, 66], "same": [1, 3, 5, 6, 10, 12, 13, 16, 17, 18, 19, 24, 34, 41, 42, 47, 54, 55, 56, 57, 58, 59, 60, 61, 63, 64, 66, 67, 68], "function": [1, 3, 6, 10, 12, 13, 14, 18, 19, 24, 26, 28, 41, 45, 49, 54, 56, 59, 61, 66, 67, 69], "subsystem": 1, "n": [1, 3, 4, 11, 13, 15, 16, 17, 21, 22, 23, 41, 47, 54, 55, 60, 64, 67], "transit": 1, "separ": [1, 3, 6, 9, 11, 16, 17, 18, 21, 42, 47, 49, 56, 58, 61, 66], "chain": [1, 12, 54, 59, 66], "necessari": [1, 6, 13, 15, 17, 21, 22, 41, 44, 56, 58, 61, 64, 66, 67, 68], "later": [1, 5, 6, 9, 10, 12, 16, 17, 26, 42, 53, 56, 61, 64, 68, 69], "demonstr": [1, 7, 11, 13, 15, 17, 22, 23, 25, 27, 31, 41, 42, 57, 62, 67, 69], "passiv": [1, 5, 13, 16], "allow": [1, 2, 6, 10, 11, 13, 16, 17, 22, 24, 41, 47, 58, 66, 67, 69], "below": [1, 2, 6, 13, 16, 20, 22, 23, 32, 35, 37, 41, 47, 54, 58, 59, 61, 66, 67], "onli": [1, 3, 5, 6, 9, 10, 12, 13, 15, 16, 17, 20, 22, 23, 24, 31, 32, 41, 42, 44, 45, 47, 48, 54, 55, 57, 58, 59, 60, 64, 67, 68, 69], "mai": [1, 2, 6, 10, 13, 16, 17, 22, 23, 25, 28, 30, 32, 33, 35, 40, 41, 42, 43, 44, 47, 49, 58, 64, 66, 67, 68], "9": [1, 3, 5, 6, 8, 9, 10, 11, 12, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 38, 41, 54, 55, 56, 57, 58, 59, 61, 62, 63, 64, 65, 66, 68, 69], "For": [1, 2, 6, 10, 12, 16, 17, 30, 31, 33, 36, 37, 41, 44, 45, 47, 49, 53, 54, 56, 58, 59, 61, 64, 66, 67, 68], "than": [1, 6, 9, 10, 13, 16, 17, 18, 22, 26, 38, 42, 43, 47, 54, 56, 59, 61, 64, 66, 67, 70], "dlya": 1, "stra": 1, "lnka": 1, "modifi": [1, 6, 19, 42, 47, 55, 60, 66, 70], "name": [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 28, 30, 31, 32, 35, 36, 38, 40, 41, 42, 45, 47, 48, 49, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69], "requir": [1, 6, 10, 17, 22, 26, 32, 41, 42, 43, 47, 48, 49, 53, 58, 66, 67, 68], "waita": 1, "act": 1, "like": [1, 2, 15, 16, 20, 23, 30, 32, 33, 41, 42, 43, 45, 47, 48, 58, 64, 66, 69], "sens": 1, "watch": [1, 7, 22, 23], "channel": [1, 6, 10, 11, 12, 13, 16, 19, 22, 23, 24, 26, 35, 41, 42, 47, 51, 53, 54, 55, 56, 57, 59, 60, 61, 68], "react": [1, 13], "via": [1, 2, 9, 13, 16, 21, 41, 49, 66], "o": [1, 5, 6, 11, 13, 16, 17, 18, 22], "intr": [1, 5, 6, 16], "calc": [1, 6, 16, 23, 41, 57, 67], "oopt": 1, "non": [1, 13, 41, 49, 58, 64, 67], "zero": [1, 13, 16, 17, 64, 67], "send": [1, 2, 10, 16], "proc": [1, 58], "field": [1, 10, 13, 15, 16, 17, 21, 22, 23, 24, 41, 54, 55, 57, 58, 59, 60, 66], "outn": 1, "local": [1, 10, 11, 13, 24, 25, 31, 32, 37, 41, 42, 45, 47, 48, 54, 55, 56, 57, 59, 60, 61, 62, 66], "3": [1, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 32, 41, 42, 45, 47, 53, 54, 55, 56, 57, 58, 59, 60, 63, 64, 65, 66, 67, 68, 69, 70], "epicssign": [1, 4, 13, 16, 17, 21, 24, 35, 38, 41, 53, 54, 57, 58, 59, 70], "flyscan": 1, "taxi_sseq": 1, "userstringseq1": 1, "taxi_swait": 1, "usercalc11": 1, "fly_sseq": 1, "userstringseq2": 1, "fly_swait": 1, "usercalc12": 1, "obj": [1, 6, 15, 17, 22], "wait_for_connect": [1, 6, 10, 13, 16, 17, 21, 22, 23, 38, 54, 55, 56, 59, 60, 61, 62, 66, 68], "alreadi": [1, 3, 6, 11, 21, 23, 33, 47, 66, 67], "enabl": [1, 10, 13, 17, 37, 42, 50, 58, 66, 68], "sseq_en": 1, "userstringseqen": 1, "swait_en": 1, "usercalcen": [1, 23], "follow": [1, 13, 16, 17, 20, 21, 23, 32, 33, 35, 37, 39, 42, 47, 53, 54, 59, 67, 69], "predefin": [1, 42, 54, 59], "pattern": [1, 30, 35, 48, 58], "support": [1, 2, 5, 6, 10, 13, 16, 19, 21, 22, 23, 30, 41, 43, 44, 45, 47, 53, 54, 55, 58, 59, 60, 66, 67, 68], "clear": [1, 13, 16, 17, 22, 55, 60], "previou": [1, 8, 10, 12, 13, 16, 20, 22, 23, 43, 47, 53, 58, 64, 66, 67], "them": [1, 6, 10, 13, 15, 17, 30, 33, 35, 41, 42, 58, 64, 66, 68], "sscanrecord": [1, 22], "have": [1, 2, 3, 6, 7, 9, 10, 12, 13, 15, 16, 21, 22, 24, 32, 33, 34, 36, 38, 39, 40, 41, 42, 44, 45, 47, 53, 54, 55, 56, 58, 59, 60, 61, 64, 66, 67, 68, 69], "intend": 1, "session": [1, 2, 5, 6, 9, 10, 12, 14, 16, 18, 19, 22, 24, 26, 28, 29, 30, 32, 33, 40, 41, 42, 43, 47, 50, 52, 53, 57, 58, 63, 64, 66, 67, 69, 70], "take": [1, 2, 5, 6, 10, 13, 16, 21, 22, 26, 32, 41, 42, 47, 53, 54, 59, 64, 66, 68, 70], "possibli": [1, 10], "normal": [1, 10, 17, 18, 31, 41, 58], "execut": [1, 9, 10, 11, 15, 17, 22, 23, 34, 36, 42, 53, 56, 58, 61, 64, 68, 69], "callback": [1, 5, 6, 7, 9, 10, 12, 14, 15, 16, 18, 19, 21, 22, 23, 40, 41, 43, 49, 54, 55, 56, 57, 59, 60, 61, 62, 63, 64, 65, 66, 67, 69], "thread": [1, 15, 21], "u": [1, 12, 13, 17, 19, 37, 45, 58, 67, 68], "so": [1, 2, 5, 6, 10, 12, 13, 15, 16, 17, 18, 19, 21, 30, 37, 41, 42, 43, 45, 48, 54, 56, 57, 59, 61, 64, 66, 67, 68], "4": [1, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 16, 17, 18, 19, 21, 22, 23, 26, 38, 41, 42, 54, 55, 56, 57, 58, 59, 60, 61, 62, 64, 65, 66, 68, 69, 70], "prep_taxi_fly_simple_delai": 1, "taxi_delay_": 1, "fly_delay_": 1, "2f": [1, 13, 23, 68], "stop": [1, 2, 4, 8, 11, 15, 16, 21, 22, 42, 54, 55, 58, 59, 60, 66, 69], "mv": [1, 6, 13, 14, 16, 17, 21, 23, 24, 57], "forward_link": [1, 13, 58], "output_link": 1, "sleep": [1, 13, 14, 15, 16, 17, 21, 22, 23, 24, 42], "arbitrari": [1, 26], "scanning_r": [1, 5, 6, 8, 13, 16, 23, 41, 57, 58], "input_pv": [1, 6, 13, 16, 22, 23], "prefix": [1, 3, 4, 8, 12, 13, 15, 16, 17, 21, 22, 41, 42, 47, 54, 55, 56, 57, 58, 59, 60, 61, 62, 64, 66, 68, 69], "calcul": [1, 5, 6, 8, 13, 16, 18, 22, 23, 41, 57], "output_execute_opt": 1, "output_link_pv": 1, "process_record": [1, 58], "pvname": [1, 4, 6, 13, 16, 17, 22, 23], "select": [1, 3, 10, 12, 17, 18, 19, 23, 26, 37, 54, 56, 59, 61, 67], "step10": 1, "string_valu": 1, "wait_complet": 1, "output_pv": [1, 13], "nm": [1, 13, 17, 67], "5": [1, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 16, 17, 18, 19, 21, 22, 23, 24, 26, 37, 38, 41, 42, 45, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 67, 68, 69, 70], "6": [1, 3, 5, 6, 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2, "sphinx.domains.math": 2, "sphinx.domains.python": 3, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx.ext.todo": 2, "sphinx.ext.viewcode": 1, "nbsphinx": 4, "sphinx": 57}, "alltitles": {"Changes": [[0, "id1"]], "1.0.2": [[0, "id2"]], "New Features": [[0, "new-features"], [0, "id3"]], "Maintenance": [[0, "maintenance"], [0, "id4"]], "v1.0.1": [[0, "v1-0-1"]], "Breaking Changes": [[0, "breaking-changes"]], "Fixes": [[0, "fixes"]], "v1.0.0": [[0, "v1-0-0"]], "Notice": [[0, "notice"]], "APS fly scans with taxi & fly busy records": [[1, "APS-fly-scans-with-taxi-&-fly-busy-records"]], "Overview": [[1, "Overview"], [13, "Overview"], [16, "Overview"], [22, "Overview"], [53, "overview"], [58, "overview"]], "Bluesky (Python) setup": [[1, "Bluesky-(Python)-setup"]], "EPICS IOC": [[1, "EPICS-IOC"]], "The busy record": [[1, "The-busy-record"]], "Procedure \u2013 Delay a short time": [[1, "Procedure----Delay-a-short-time"]], "SseqRecord": [[1, "SseqRecord"]], "SwaitRecord": [[1, "SwaitRecord"]], "Connect with EPICS": [[1, "Connect-with-EPICS"], [58, "connect-with-epics"]], "Write the plan that prepares EPICS": [[1, "Write-the-plan-that-prepares-EPICS"]], "The reset() method": [[1, "The-reset()-method"]], "Run the preparation plan": [[1, "Run-the-preparation-plan"], [1, "id1"]], "Run taxi & fly scan plan": [[1, "Run-taxi-&-fly-scan-plan"]], "Procedure \u2013 step scan scaler & motor": [[1, "Procedure----step-scan-scaler-&-motor"]], "scaler record": [[1, "scaler-record"]], "motor record": [[1, "motor-record"]], "sscan record": [[1, "sscan-record"]], "Write a preparation plan for the step scan": [[1, "Write-a-preparation-plan-for-the-step-scan"]], "Run the taxi & fly scan": [[1, "Run-the-taxi-&-fly-scan"]], "Collect the data": [[1, "Collect-the-data"]], "Run the complete taxi/fly scan": [[1, "Run-the-complete-taxi/fly-scan"]], "Plot the data from the last scan": [[1, "Plot-the-data-from-the-last-scan"]], "Exporting data from Bluesky": [[2, "exporting-data-from-bluesky"]], "Choices": [[2, "choices"]], "databroker-pack": [[2, "databroker-pack"]], "Identify experiment data in databroker": [[2, "identify-experiment-data-in-databroker"]], "file export": [[2, "file-export"]], "text files": [[2, "text-files"]], "CSV": [[2, "csv"]], "JSON": [[2, "json"]], "SPEC": [[2, "spec"]], "HDF5 files": [[2, "hdf5-files"]], "raw": [[2, "raw"]], "NeXus": [[2, "nexus"]], "DX : Data Exchange": [[2, "dx-data-exchange"]], "Callbacks": [[2, "callbacks"], [30, "callbacks"], [42, "callbacks"]], "apstools": [[2, "apstools"]], "NeXus - NXWriterAPS": [[2, "nexus-nxwriteraps"]], "SPEC: SpecWriterCallback": [[2, "spec-specwritercallback"]], "Export bluesky data to CSV": [[3, "Export-bluesky-data-to-CSV"]], "Export one run to CSV": [[3, "Export-one-run-to-CSV"]], "Search for runs by time": [[3, "Search-for-runs-by-time"]], "Export a list of runs": [[3, "Export-a-list-of-runs"]], "Export run to JSON file": [[3, "Export-run-to-JSON-file"]], "Demo the spec file writer callback": [[4, "Demo-the-spec-file-writer-callback"]], "Watch a temperature : scan temperature v time": [[5, "Watch-a-temperature-:-scan-temperature-v-time"]], "Start the instrument package": [[5, "Start-the-instrument-package"], [6, "Start-the-instrument-package"], [12, "Start-the-instrument-package"], [18, "Start-the-instrument-package"], [19, "Start-the-instrument-package"], [41, "Start-the-instrument-package"], [57, "Start-the-instrument-package"]], "Describe": [[5, "Describe"]], "Count": [[5, "Count"], [11, "count"], [24, "count"], [57, "Count"]], "Adjust the measurement interval": [[5, "Adjust-the-measurement-interval"]], "Collect our measurements": [[5, "Collect-our-measurements"]], "Get the data (from the database)": [[5, "Get-the-data-(from-the-database)"]], "Compute the statistics": [[5, "Compute-the-statistics"], [8, "Compute-the-statistics"]], "XAFS scan": [[6, "XAFS-scan"]], "Energy & k": [[6, "Energy-&-k"]], "Multiple segments": [[6, "Multiple-segments"]], "real-time computation of absorption coefficient": [[6, "real-time-computation-of-absorption-coefficient"]], "xafs() plan": [[6, "xafs()-plan"]], "XAFS scan with bluesky": [[6, "XAFS-scan-with-bluesky"]], "Challenges": [[6, "Challenges"], [10, "Challenges"], [14, "Challenges"]], "References": [[6, "References"], [22, "References"], [22, "id1"]], "Examples": [[7, "examples"]], "Accessing data later, after the measurement": [[8, "Accessing-data-later,-after-the-measurement"]], "Skip the instrument package": [[8, "Skip-the-instrument-package"]], "Access the database": [[8, "Access-the-database"]], "Read the primary data stream of the run": [[8, "Read-the-primary-data-stream-of-the-run"]], "APS Accelerator Information for Beamlines": [[9, "APS-Accelerator-Information-for-Beamlines"]], "Minimal: Scan scaler vs motor": [[10, "Minimal:-Scan-scaler-vs-motor"]], "Connect the motor": [[10, "Connect-the-motor"]], "Connect the scaler": [[10, "Connect-the-scaler"]], "Set the scaler\u2019s counting time": [[10, "Set-the-scaler's-counting-time"]], "labels and the %wa magic command": [[10, "labels-and-the-%wa-magic-command"]], "Prepare to scan": [[10, "Prepare-to-scan"]], "Summary of preparations for scanning": [[10, "Summary-of-preparations-for-scanning"]], "First scan": [[10, "First-scan"]], "Fix a few problems": [[10, "Fix-a-few-problems"]], "Scan with a different counting time : staging": [[10, "Scan-with-a-different-counting-time-:-staging"]], "Custom plan with configurable count time": [[10, "Custom-plan-with-configurable-count-time"]], "First steps with bluesky-queueserver": [[11, "first-steps-with-bluesky-queueserver"]], "One-time setup": [[11, "one-time-setup"]], "Start a monitor on a qserver": [[11, "start-a-monitor-on-a-qserver"]], "Run plans on the qserver": [[11, "run-plans-on-the-qserver"]], "Available devices and plans": [[11, "available-devices-and-plans"]], "Scan": [[11, "scan"]], "Shutdown the queue server": [[11, "shutdown-the-queue-server"]], "Count the scaler": [[12, "Count-the-scaler"]], "A closer look at the EPICS scaler": [[12, "A-closer-look-at-the-EPICS-scaler"]], "use ophyd to count the scaler": [[12, "use-ophyd-to-count-the-scaler"]], "use bluesky (the package) to count the scaler": [[12, "use-bluesky-(the-package)-to-count-the-scaler"]], "Heater Simulation using synApps epid and transform records": [[13, "Heater-Simulation-using-synApps-epid-and-transform-records"]], "Schematic": [[13, "Schematic"]], "Implementation": [[13, "Implementation"]], "PID Control Loops": [[13, "PID-Control-Loops"]], "ophyd interface": [[13, "ophyd-interface"]], "Setup the heater and pid": [[13, "Setup-the-heater-and-pid"]], "heater as positioner": [[13, "heater-as-positioner"]], "ramp the temperature": [[13, "ramp-the-temperature"]], "Thermal profile": [[13, "Thermal-profile"]], "Custom bluesky plan": [[14, "Custom-bluesky-plan"]], "Preparation": [[14, "Preparation"], [67, "Preparation"]], "Select scaler channels": [[14, "Select-scaler-channels"]], "Count time": [[14, "Count-time"]], "Construct the plan": [[14, "Construct-the-plan"]], "Run": [[14, "Run"]], "Linux Command & Wait for Finish": [[15, "Linux-Command-&-Wait-for-Finish"]], "1. Example shell command": [[15, "1.-Example-shell-command"]], "2. Run from Python subprocess": [[15, "2.-Run-from-Python-subprocess"]], "3. As ophyd.Signal": [[15, "3.-As-ophyd.Signal"]], "4. As ophyd.Device": [[15, "4.-As-ophyd.Device"]], "5. Run with bluesky": [[15, "5.-Run-with-bluesky"]], "Dynamic Limits for Two Motors": [[16, "Dynamic-Limits-for-Two-Motors"]], "Summary": [[16, "Summary"], [54, "Summary"], [55, "Summary"], [56, "Summary"], [59, "Summary"], [60, "Summary"], [61, "Summary"]], "EPICS setup": [[16, "EPICS-setup"]], "Bluesky setup": [[16, "Bluesky-setup"]], "Custom Bluesky plan for \\theta:2\\theta scan": [[16, "Custom-Bluesky-plan-for-\\theta:2\\theta-scan"]], "Try to provoke a permit denied": [[16, "Try-to-provoke-a-permit-denied"]], "Create a suspender": [[16, "Create-a-suspender"]], "Conclusion": [[16, "Conclusion"]], "Images, Darks, & whites with EPICS area detector, ophyd, and Bluesky": [[17, "Images,-Darks,-&-whites-with-EPICS-area-detector,-ophyd,-and-Bluesky"]], "Setup": [[17, "Setup"], [67, "Setup"]], "Notebook-specific details": [[17, "Notebook-specific-details"]], "XML Attributes File": [[17, "XML-Attributes-File"]], "XML Layout File": [[17, "XML-Layout-File"]], "Ophyd Device Setup": [[17, "Ophyd-Device-Setup"]], "Support Functions": [[17, "Support-Functions"]], "Configure PV for the Frame Type": [[17, "Configure-PV-for-the-Frame-Type"]], "Create Detector Object": [[17, "Create-Detector-Object"]], "Create RunEngine": [[17, "Create-RunEngine"]], "Review the Configurations": [[17, "Review-the-Configurations"]], "Acquire Images with Standard bp.count() Plan": [[17, "Acquire-Images-with-Standard-bp.count()-Plan"]], "Use Ophyd to Acquire Image Frames": [[17, "Use-Ophyd-to-Acquire-Image-Frames"]], "Install Support for Custom Frame Types": [[17, "Install-Support-for-Custom-Frame-Types"]], "Start Data Acquisition": [[17, "Start-Data-Acquisition"]], "Collect Different Frame Types": [[17, "Collect-Different-Frame-Types"]], "End Data Acquisition": [[17, "End-Data-Acquisition"]], "Use Bluesky to Acquire Image Frames": [[17, "Use-Bluesky-to-Acquire-Image-Frames"]], "Custom Bluesky Plan": [[17, "Custom-Bluesky-Plan"]], "Acquire Image Frames with Bluesky": [[17, "Acquire-Image-Frames-with-Bluesky"]], "Lineup a 1-D peak : scan detector v motor": [[18, "Lineup-a-1-D-peak-:-scan-detector-v-motor"]], "About the noisy peak": [[18, "About-the-noisy-peak"]], "2-pass scan": [[18, "2-pass-scan"]], "Multi-pass scan": [[18, "Multi-pass-scan"]], "Locate peak on 2-D area detector image": [[19, "Locate-peak-on-2-D-area-detector-image"]], "View the image": [[19, "View-the-image"]], "Get the run": [[19, "Get-the-run"]], "Primary stream": [[19, "Primary-stream"]], "Get the image data": [[19, "Get-the-image-data"]], "Image frame": [[19, "Image-frame"]], "Show the image": [[19, "Show-the-image"], [66, "Show-the-image"]], "Center & size of spot": [[19, "Center-&-size-of-spot"]], "Next Steps": [[19, "Next-Steps"]], "Plot x, y data from a databroker run": [[20, "Plot-x,-y-data-from-a-databroker-run"]], "1. Show what data catalogs are available": [[20, "1.-Show-what-data-catalogs-are-available"]], "2. Choose a specific run from a catalog": [[20, "2.-Choose-a-specific-run-from-a-catalog"]], "3. Show the (primary) data": [[20, "3.-Show-the-(primary)-data"]], "4. Get data for the x and y axes": [[20, "4.-Get-data-for-the-x-and-y-axes"]], "5. Use MatPlotLib": [[20, "5.-Use-MatPlotLib"]], "6. Plot (x,y) using matplotlib": [[20, "6.-Plot-(x,y)-using-matplotlib"]], "7. Plotting function": [[20, "7.-Plotting-function"]], "synApps busy record": [[21, "synApps-busy-record"]], "arbitrary operation": [[21, "arbitrary-operation"]], "operation uses trigger() method": [[21, "operation-uses-trigger()-method"]], "positioner movement": [[21, "positioner-movement"]], "synApps sscan as 1D Flyer": [[22, "synApps-sscan-as-1D-Flyer"]], "Load the instrument package": [[22, "Load-the-instrument-package"]], "Bluesky step scan": [[22, "Bluesky-step-scan"]], "sscan as Bluesky Flyer": [[22, "sscan-as-Bluesky-Flyer"]], "Simulate a temperature controller with an EPICS swait record": [[23, "Simulate-a-temperature-controller-with-an-EPICS-swait-record"]], "Connect with a swait record": [[23, "Connect-with-a-swait-record"]], "Create a function to setup the controller": [[23, "Create-a-function-to-setup-the-controller"]], "Setup our controller": [[23, "Setup-our-controller"]], "temperature as a positioner": [[23, "temperature-as-a-positioner"]], "Change the setpoint": [[23, "Change-the-setpoint"]], "Move the temperature as a positioner": [[23, "Move-the-temperature-as-a-positioner"]], "Use the temperature positioner with a bluesky plan": [[23, "Use-the-temperature-positioner-with-a-bluesky-plan"]], "SimulatedTransformControllerPositioner device": [[23, "SimulatedTransformControllerPositioner-device"]], "Bluesky Cheat Sheet": [[24, "bluesky-cheat-sheet"]], "Read": [[24, "read"], [57, "Read"]], "Move": [[24, "move"], [57, "Move"]], "List, Describe, Summary": [[24, "list-describe-summary"], [57, "List,-Describe,-Summary"]], "Bluesky Plans vs. Command-line Actions": [[24, "bluesky-plans-vs-command-line-actions"]], "Log files": [[24, "log-files"], [41, "Log-files"]], "Getting started": [[25, "getting-started"]], "How to start a Bluesky session?": [[25, "how-to-start-a-bluesky-session"], [45, "how-to-start-a-bluesky-session"]], "Use blueskyStarter.sh to start a console session": [[25, "use-blueskystarter-sh-to-start-a-console-session"]], "Use blueskyStarter.sh to start a notebook session": [[25, "use-blueskystarter-sh-to-start-a-notebook-session"]], "How-To Guides": [[26, "how-to-guides"]], "APS Bluesky Training": [[27, "aps-bluesky-training"]], "About": [[27, "about"]], "Python __init__.py files": [[28, "python-init-py-files"]], "instrument/collection.py": [[28, "instrument-collection-py"]], "instrument/queueserver.py": [[28, "instrument-queueserver-py"]], "Activate the bluesky conda environment": [[29, "activate-the-bluesky-conda-environment"]], "Configure bluesky instrument": [[30, "configure-bluesky-instrument"]], "Initial configuration of the instrument": [[30, "initial-configuration-of-the-instrument"]], "Parts of the instrument package": [[30, "parts-of-the-instrument-package"]], "matplotlib": [[30, "matplotlib"]], "Devices": [[30, "devices"]], "Plans": [[30, "plans"]], "Utils": [[30, "utils"]], "Setup your databroker catalog configuration": [[31, "setup-your-databroker-catalog-configuration"]], "Create bluesky directory": [[32, "create-bluesky-directory"]], "Create a bluesky IPython profile": [[33, "create-a-bluesky-ipython-profile"]], "Create a File System Soft Link": [[34, "create-a-file-system-soft-link"]], "Start a Bluesky Console Session": [[34, "start-a-bluesky-console-session"]], "The ${HOME}/bin directory": [[34, "the-home-bin-directory"]], "File system links": [[34, "file-system-links"]], "Translate Previous SPEC Configuration": [[35, "translate-previous-spec-configuration"]], "Setup catalog configuration for databroker": [[36, "setup-catalog-configuration-for-databroker"]], "Start software version control": [[37, "start-software-version-control"]], "Test that Bluesky Works at APS": [[38, "test-that-bluesky-works-at-aps"]], "Test the new bluesky instrument": [[39, "test-the-new-bluesky-instrument"]], "Test the New Bluesky Instrument": [[40, "test-the-new-bluesky-instrument"]], "The instrument package for Bluesky Data Acquisition": [[41, "The-instrument-package-for-Bluesky-Data-Acquisition"]], "Description": [[41, "Description"]], "iconfig": [[41, "iconfig"], [42, "iconfig"]], "adsimdet": [[41, "adsimdet"]], "scaler1": [[41, "scaler1"]], "temperature": [[41, "temperature"], [57, "temperature"]], "motors": [[41, "motors"]], "noisy": [[41, "noisy"]], "plans": [[41, "plans"]], "SPEC data files": [[41, "SPEC-data-files"]], "User Code File": [[41, "User-Code-File"]], "databroker": [[41, "databroker"]], "Instrument Package Guide": [[42, "instrument-package-guide"]], "Basic Structure": [[42, "basic-structure"]], "Add Motor(s)": [[42, "add-motor-s"]], "Add Scaler(s)": [[42, "add-scaler-s"]], "Re-organize into Devices": [[42, "re-organize-into-devices"]], "Add Area Detector(s)": [[42, "add-area-detector-s"]], "Other Device Support": [[42, "other-device-support"]], "Implement Custom Plans": [[42, "implement-custom-plans"]], "Review Metadata": [[42, "review-metadata"]], "Experiment-specific User Code": [[42, "experiment-specific-user-code"]], "Instrument": [[43, "instrument"]], "Install New Instrument": [[44, "install-new-instrument"]], "Installation checklist": [[44, "installation-checklist"]], "Next steps \u2026": [[44, "next-steps"]], "Frequently Asked Questions": [[45, "frequently-asked-questions"]], "How to install Bluesky?": [[45, "how-to-install-bluesky"]], "How to create an alias to start a bluesky session?": [[45, "how-to-create-an-alias-to-start-a-bluesky-session"]], "How to create an alias to activate the bluesky environment?": [[45, "how-to-create-an-alias-to-activate-the-bluesky-environment"]], "In python, what are classes, objects, methods and instances?": [[45, "in-python-what-are-classes-objects-methods-and-instances"]], "What is bash?": [[45, "what-is-bash"]], "What does the (~) mean in a path?": [[45, "what-does-the-mean-in-a-path"]], "How to understand a timestamp?": [[45, "how-to-understand-a-timestamp"]], "APS Data Management": [[46, "aps-data-management"]], "Create bluesky environment": [[47, "create-bluesky-environment"]], "Activate conda": [[47, "activate-conda"]], "Install the bluesky environment": [[47, "install-the-bluesky-environment"]], "Create an alias to activate the bluesky environment": [[47, "create-an-alias-to-activate-the-bluesky-environment"]], "Other reading": [[47, "other-reading"]], "Git Advice for APS beam lines": [[48, "git-advice-for-aps-beam-lines"]], "Beamline GitHub organizations": [[48, "beamline-github-organizations"]], "APS GitLab": [[48, "aps-gitlab"]], "Guides": [[48, "guides"]], "Bluesky: Brief Introduction": [[49, "bluesky-brief-introduction"]], "Motivation": [[49, "motivation"]], "Principal parts of The Bluesky framework": [[49, "principal-parts-of-the-bluesky-framework"]], "How does it work?": [[49, "how-does-it-work"]], "How does Bluesky fit in?": [[49, "how-does-bluesky-fit-in"]], "Configure IPython Profile for Bluesky": [[50, "configure-ipython-profile-for-bluesky"]], "Python snippet to start instrument for data collection": [[50, "python-snippet-to-start-instrument-for-data-collection"]], "Create IPython Profile for Bluesky": [[50, "create-ipython-profile-for-bluesky"]], "Add a single Python file to the startup directory": [[50, "add-a-single-python-file-to-the-startup-directory"]], "Other resources": [[51, "other-resources"]], "Reference": [[52, "reference"], [53, "reference"]], "APS Bluesky 101 - Presenter\u2019s Notes": [[53, "aps-bluesky-101-presenter-s-notes"]], "Syllabus": [[53, "syllabus"]], "Before the class": [[53, "before-the-class"]], "Covered here": [[53, "covered-here"]], "Not covered here": [[53, "not-covered-here"]], "Community": [[53, "community"]], "Information": [[53, "information"]], "Basic, Part A: Scaler and Count": [[54, "Basic,-Part-A:-Scaler-and-Count"]], "Starting this session in a Jupyter notebook": [[54, "Starting-this-session-in-a-Jupyter-notebook"], [59, "Starting-this-session-in-a-Jupyter-notebook"]], "Connect an EPICS scaler": [[54, "Connect-an-EPICS-scaler"], [59, "Connect-an-EPICS-scaler"]], "Get, then Set the count time on the scaler": [[54, "Get,-then-Set-the-count-time-on-the-scaler"], [59, "Get,-then-Set-the-count-time-on-the-scaler"]], "Use Bluesky to count the scaler": [[54, "Use-Bluesky-to-count-the-scaler"], [59, "Use-Bluesky-to-count-the-scaler"]], "Report about the documents emitted from the RunEngine": [[54, "Report-about-the-documents-emitted-from-the-RunEngine"], [59, "Report-about-the-documents-emitted-from-the-RunEngine"]], "Quit the jupyter notebook": [[54, "Quit-the-jupyter-notebook"], [59, "Quit-the-jupyter-notebook"]], "Basic, Part B: Motor and Move": [[55, "Basic,-Part-B:-Motor-and-Move"]], "Basic, Part C: Step Scan with Scaler and Motor": [[56, "Basic,-Part-C:-Step-Scan-with-Scaler-and-Motor"]], "Showing the data": [[56, "Showing-the-data"], [61, "Showing-the-data"]], "Review of Bluesky commands": [[57, "Review-of-Bluesky-commands"]], "motor": [[57, "motor"]], "bluesky": [[57, "bluesky"]], "Custom Devices": [[58, 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55, 56, 57, 59, 60, 61, 62, 63, 64, 66, 67], "compon": [1, 13, 15, 16, 17, 21, 41, 42, 58, 66, 67, 69, 70], "devic": [1, 5, 6, 9, 10, 12, 13, 14, 16, 18, 19, 21, 22, 26, 35, 38, 40, 41, 43, 49, 53, 54, 55, 56, 57, 59, 60, 61, 62, 64, 65, 66, 69, 70], "signal": [1, 4, 6, 13, 16, 17, 18, 19, 21, 22, 23, 24, 26, 41, 42, 49, 54, 55, 56, 57, 58, 59, 60, 61, 64, 66], "getlogg": [1, 21], "setlevel": [1, 21], "info": [1, 6, 10, 11, 14, 16, 21, 22, 24, 32, 33, 37, 41, 44, 47, 49], "re": [1, 4, 5, 6, 8, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 35, 43, 45, 54, 55, 56, 57, 59, 60, 61, 62, 63, 64, 65, 66, 67, 69], "cat": [1, 2, 3, 5, 8, 10, 11, 12, 15, 16, 17, 18, 19, 20, 21, 22, 33, 69], "temp": [1, 17, 21, 40, 69], "v2": [1, 8, 10, 12, 14, 17, 58, 69], "v1": [1, 10, 16, 17, 21, 41, 58, 69], "insert": [1, 10, 17, 21, 24, 69], "f": [1, 2, 3, 4, 6, 8, 10, 12, 13, 15, 16, 17, 18, 20, 21, 22, 23, 41, 42, 47, 55, 56, 61, 62, 64, 66, 68], "lt": [1, 3, 5, 6, 8, 9, 10, 12, 14, 16, 17, 18, 19, 20, 22, 41, 57, 63, 64, 65, 66, 67, 69], "intak": [1, 8, 10, 31, 41], "gt": [1, 3, 5, 6, 8, 9, 12, 13, 14, 16, 17, 18, 19, 20, 22, 41, 57, 59, 61, 63, 64, 65, 66, 67, 69], "provid": [1, 2, 5, 6, 10, 12, 15, 16, 17, 18, 20, 21, 22, 23, 30, 32, 37, 38, 41, 42, 45, 48, 49, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 64, 66, 67], "gp": [1, 4, 5, 8, 10, 12, 13, 16, 18, 21, 22, 23, 30, 41, 53, 54, 55, 56, 57, 58, 62, 68], "can": [1, 2, 3, 5, 6, 9, 10, 11, 12, 13, 15, 16, 17, 18, 20, 22, 23, 24, 28, 30, 31, 32, 33, 34, 36, 37, 38, 40, 41, 42, 45, 47, 49, 53, 54, 55, 56, 58, 59, 60, 61, 62, 64, 66, 67, 68, 69], "gener": [1, 4, 5, 6, 8, 10, 11, 12, 14, 15, 16, 18, 19, 20, 21, 22, 23, 24, 30, 41, 42, 47, 53, 54, 55, 56, 57, 58, 60, 62, 63, 64, 65, 66, 67, 69], "purpos": [1, 2, 6, 10, 11, 21, 22, 31, 36, 41, 47, 53], "mybusy1": [1, 21], "mybusy2": [1, 21], "subclass": [1, 15, 22, 41, 42, 58], "coordin": [1, 2, 3, 6, 8, 11, 12, 17, 19, 20, 22, 42, 49, 67, 69], "both": [1, 9, 12, 13, 16, 17, 18, 19, 21, 23, 28, 31, 37, 41, 53, 56, 58, 61, 64, 68], "class": [1, 2, 10, 13, 15, 16, 17, 21, 22, 23, 41, 42, 49, 52, 57, 58, 66, 67, 68, 69, 70], "interfac": [1, 10, 12, 15, 22, 26, 34, 41, 45, 49, 50, 66, 67], "mybusyrecord": 1, "redefin": [1, 67], "advis": 1, "tutori": [1, 6, 10, 14, 20, 23, 25, 26, 27, 40, 43, 45, 48, 53, 54, 55, 56, 58, 59, 60, 61, 62, 64, 66], "A": [1, 2, 3, 5, 6, 10, 13, 16, 17, 20, 21, 22, 23, 26, 30, 41, 42, 45, 47, 49, 50, 53, 55, 56, 57, 58, 59, 60, 62, 66, 67, 70], "devicestatu": [1, 15, 21, 22], "monitor": [1, 9, 10, 16, 18, 22, 23, 26, 49, 68], "progress": [1, 6, 10, 13, 16, 22, 41, 56, 57, 61, 66], "ident": 1, "taxi_fly_plan": 1, "note": [1, 2, 5, 6, 9, 10, 11, 12, 13, 15, 17, 19, 22, 23, 24, 30, 33, 37, 41, 42, 45, 47, 54, 55, 56, 58, 59, 60, 61, 62, 66, 67, 68, 69, 70], "It": [1, 2, 5, 10, 12, 13, 16, 18, 22, 23, 25, 28, 30, 34, 37, 41, 42, 43, 47, 49, 54, 55, 56, 58, 59, 60, 61, 64, 66, 67, 68], "should": [1, 2, 3, 10, 12, 13, 16, 17, 19, 23, 30, 32, 40, 42, 45, 46, 48, 53, 54, 55, 58, 59, 60, 62, 64, 66], "doe": [1, 2, 5, 10, 12, 15, 16, 17, 23, 30, 31, 34, 40, 41, 42, 47, 52, 53, 54, 58, 59, 63, 64, 66, 67, 69], "ani": [1, 2, 3, 8, 9, 10, 11, 12, 13, 16, 17, 22, 23, 25, 28, 30, 31, 32, 33, 34, 41, 42, 45, 46, 47, 48, 54, 56, 57, 59, 61, 63, 64, 66, 67, 69], "As": [1, 3, 10, 12, 16, 22, 26, 32, 41, 43, 49, 64, 66, 68], "consid": [1, 2, 10, 14, 16, 22, 29, 42, 43, 58, 66], "which": [1, 2, 5, 6, 8, 10, 12, 13, 16, 17, 19, 21, 22, 23, 28, 30, 31, 33, 37, 41, 42, 45, 47, 54, 56, 58, 61, 62, 64, 67, 68, 69], "open": [1, 2, 3, 11, 14, 17, 29, 31, 32, 33, 37, 45, 47, 53], "read": [1, 2, 3, 5, 9, 10, 11, 12, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 26, 38, 41, 48, 52, 53, 54, 55, 56, 59, 60, 61, 66, 68, 69, 70], "one": [1, 2, 5, 6, 7, 8, 10, 12, 15, 16, 17, 19, 21, 22, 23, 24, 30, 31, 34, 38, 41, 42, 47, 54, 55, 58, 59, 60, 64, 66, 67], "more": [1, 2, 5, 6, 8, 9, 10, 12, 13, 14, 17, 18, 20, 22, 24, 25, 26, 27, 33, 37, 38, 40, 41, 42, 43, 44, 45, 47, 50, 53, 54, 56, 57, 58, 59, 61, 64, 66, 67, 68, 69, 70], "2": [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 17, 21, 22, 23, 24, 26, 38, 40, 41, 42, 43, 45, 47, 49, 53, 54, 55, 56, 57, 58, 59, 61, 62, 63, 65, 66, 68, 69, 70], "timeout": [1, 4, 8, 15, 16, 41, 55, 60, 67], "valu": [1, 3, 4, 5, 6, 8, 9, 10, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 38, 41, 42, 54, 55, 56, 57, 58, 59, 60, 61, 66, 67, 68], "10": [1, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 38, 40, 41, 42, 54, 55, 56, 57, 58, 59, 61, 62, 63, 64, 65, 66, 67, 68, 69], "kind": [1, 2, 6, 13, 17, 21, 23, 24, 41, 54, 58, 59, 66, 67, 70], "config": [1, 9, 11, 13, 17, 24, 30, 35, 38, 41, 47, 50, 57, 58], "def": [1, 3, 4, 6, 10, 13, 14, 15, 16, 17, 20, 21, 22, 23, 24, 54, 55, 57, 59, 60, 61, 66, 67], "self": [1, 15, 16, 19, 21, 22, 53, 61, 66, 67], "statu": [1, 9, 10, 15, 17, 21, 22], "wait": [1, 5, 10, 11, 12, 13, 14, 16, 17, 21, 22, 23, 24, 26, 38, 54, 57, 59, 64, 68], "true": [1, 4, 5, 6, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 30, 38, 40, 41, 42, 57, 58, 63, 64, 66, 67, 68], "executing_valu": 1, "state": [1, 5, 6, 9, 12, 13, 14, 16, 17, 18, 19, 21, 22, 25, 40, 41, 42, 57, 63, 64, 66, 67], "enum_str": [1, 5, 17, 54, 55, 60, 66, 68], "watch_stat": 1, "old_valu": [1, 21], "kwarg": [1, 5, 10, 11, 17, 21, 22, 58, 61, 67], "when": [1, 5, 6, 9, 10, 12, 13, 14, 15, 16, 17, 18, 19, 21, 22, 23, 32, 33, 40, 41, 42, 47, 48, 50, 54, 56, 57, 58, 59, 61, 63, 64, 65, 66, 67, 68, 69], "finish": [1, 13, 14, 17, 21, 22, 26, 47, 58], "chang": [1, 5, 6, 9, 10, 12, 13, 14, 16, 17, 18, 19, 21, 22, 27, 29, 30, 31, 33, 40, 41, 42, 45, 47, 54, 55, 57, 58, 59, 60, 63, 64, 65, 66, 67, 68], "0": [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 38, 41, 42, 47, 54, 55, 56, 57, 58, 59, 60, 61, 63, 64, 65, 66, 67, 68, 69], "set_finish": [1, 17, 21, 22], "clear_sub": [1, 21], "push": [1, 13, 17, 37, 48], "put": [1, 5, 10, 13, 15, 16, 17, 21, 23, 24, 50, 54, 55, 56, 57, 59, 60, 61, 66, 68], "number": [1, 6, 9, 10, 12, 13, 16, 17, 18, 19, 22, 24, 41, 42, 45, 54, 55, 56, 58, 60, 61, 64, 66, 67, 68, 69], "text": [1, 3, 10, 13, 14, 17, 20, 22, 23, 30, 33, 42, 47, 49, 53, 54, 58, 68, 69], "differ": [1, 3, 5, 6, 9, 12, 13, 15, 16, 19, 23, 24, 26, 29, 32, 38, 41, 42, 47, 49, 53, 57, 58, 64, 66, 67, 68], "ca": [1, 12, 23, 41, 62], "And": [1, 6], "caller": [1, 6, 14], "tell": [1, 2, 11, 16, 17, 22, 32, 38, 54, 56, 59, 61, 64, 66, 68], "action": [1, 10, 12, 26, 27, 42, 58], "taxiflyscandevic": 1, "yield": [1, 4, 6, 10, 13, 14, 16, 17, 21, 22, 24, 57], "summari": [1, 2, 9, 13, 26, 38, 41, 67, 69, 70], "sseq": 1, "do": [1, 2, 3, 5, 6, 8, 10, 12, 13, 14, 15, 16, 17, 19, 22, 27, 33, 37, 41, 42, 47, 48, 55, 56, 58, 60, 61, 64, 66, 67], "its": [1, 3, 5, 6, 9, 10, 12, 14, 15, 16, 17, 18, 19, 22, 23, 40, 41, 42, 45, 46, 47, 54, 56, 57, 58, 59, 61, 63, 64, 65, 66, 67, 68, 69], "assign": [1, 10, 13, 16, 20, 31, 36, 41, 42, 69], "turn": [1, 2, 13, 66], "off": [1, 4, 9, 13, 17, 55, 60, 66, 67, 68], "veri": [1, 2, 17, 23, 42, 54, 56, 58, 59, 61, 64, 67], "limit": [1, 8, 10, 18, 23, 24, 26, 41, 54, 57, 67, 68], "task": [1, 10, 27, 47], "report": [1, 5, 6, 10, 12, 13, 14, 16, 18, 19, 21, 22, 23, 25, 40, 41, 42, 47, 56, 57, 61, 66, 67, 68], "either": [1, 2, 6, 9, 10, 13, 16, 41, 48, 58, 68], "done": [1, 7, 10, 13, 15, 16, 17, 21, 22, 23, 24, 41, 55, 57, 60, 66], "concern": [1, 27, 45], "quit": [1, 19, 70], "simpl": [1, 2, 10, 12, 15, 23, 33, 34, 42, 47, 56, 61, 64, 66, 70], "boolean": [1, 13, 16], "indic": [1, 16, 19, 21, 45, 64], "still": [1, 5, 15, 16, 22, 38, 47, 54, 59, 66], "activ": [1, 5, 6, 9, 10, 11, 12, 14, 16, 18, 19, 22, 25, 30, 33, 40, 41, 42, 43, 44, 52, 54, 57, 59, 63, 64, 66, 67, 69], "set": [1, 2, 4, 5, 6, 12, 13, 14, 15, 16, 17, 21, 22, 23, 24, 30, 37, 38, 41, 42, 43, 45, 46, 47, 49, 56, 57, 58, 61, 64, 66, 68, 69, 70], "back": [1, 10, 13, 16, 22, 47, 54, 59, 67], "usercalc": [1, 6, 16, 23], "swait": [1, 5, 13, 16, 18, 22, 26, 41], "might": [1, 2, 3, 6, 7, 9, 11, 12, 16, 30, 31, 38, 41, 42, 56, 57, 58, 66], "programm": 1, "could": [1, 6, 10, 12, 13, 25, 38, 41, 42, 66], "same": [1, 3, 5, 6, 10, 12, 13, 16, 17, 18, 19, 24, 34, 41, 42, 47, 54, 55, 56, 57, 58, 59, 60, 61, 63, 64, 66, 67, 68], "function": [1, 3, 6, 10, 12, 13, 14, 18, 19, 24, 26, 28, 41, 45, 49, 54, 56, 59, 61, 66, 67, 69], "subsystem": 1, "n": [1, 3, 4, 11, 13, 15, 16, 17, 21, 22, 23, 41, 47, 54, 55, 60, 64, 67], "transit": 1, "separ": [1, 3, 6, 9, 11, 16, 17, 18, 21, 42, 47, 49, 56, 58, 61, 66], "chain": [1, 12, 54, 59, 66], "necessari": [1, 6, 13, 15, 17, 21, 22, 41, 44, 56, 58, 61, 64, 66, 67, 68], "later": [1, 5, 6, 9, 10, 12, 16, 17, 26, 42, 53, 56, 61, 64, 68, 69], "demonstr": [1, 7, 11, 13, 15, 17, 22, 23, 25, 27, 31, 41, 42, 57, 62, 67, 69], "passiv": [1, 5, 13, 16], "allow": [1, 2, 6, 10, 11, 13, 16, 17, 22, 24, 41, 47, 58, 66, 67, 69], "below": [1, 2, 6, 13, 16, 20, 22, 23, 32, 35, 37, 41, 47, 54, 58, 59, 61, 66, 67], "onli": [1, 3, 5, 6, 9, 10, 12, 13, 15, 16, 17, 20, 22, 23, 24, 31, 32, 41, 42, 44, 45, 47, 48, 54, 55, 57, 58, 59, 60, 64, 67, 68, 69], "mai": [1, 2, 6, 10, 13, 16, 17, 22, 23, 25, 28, 30, 32, 33, 35, 40, 41, 42, 43, 44, 47, 49, 58, 64, 66, 67, 68], "9": [1, 3, 5, 6, 8, 9, 10, 11, 12, 14, 15, 16, 17, 18, 19, 21, 22, 23, 24, 38, 41, 54, 55, 56, 57, 58, 59, 61, 62, 63, 64, 65, 66, 68, 69], "For": [1, 2, 6, 10, 12, 16, 17, 30, 31, 33, 36, 37, 41, 44, 45, 47, 49, 53, 54, 56, 58, 59, 61, 64, 66, 67, 68], "than": [1, 6, 9, 10, 13, 16, 17, 18, 22, 26, 38, 42, 43, 47, 54, 56, 59, 61, 64, 66, 67, 70], "dlya": 1, "stra": 1, "lnka": 1, "modifi": [1, 6, 19, 42, 47, 55, 60, 66, 70], "name": [1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 28, 30, 31, 32, 35, 36, 38, 40, 41, 42, 45, 47, 48, 49, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69], "requir": [1, 6, 10, 17, 22, 26, 32, 41, 42, 43, 47, 48, 49, 53, 58, 66, 67, 68], "waita": 1, "act": 1, "like": [1, 2, 15, 16, 20, 23, 30, 32, 33, 41, 42, 43, 45, 47, 48, 58, 64, 66, 69], "sens": 1, "watch": [1, 7, 22, 23], "channel": [1, 6, 10, 11, 12, 13, 16, 19, 22, 23, 24, 26, 35, 41, 42, 47, 51, 53, 54, 55, 56, 57, 59, 60, 61, 68], "react": [1, 13], "via": [1, 2, 9, 13, 16, 21, 41, 49, 66], "o": [1, 5, 6, 11, 13, 16, 17, 18, 22], "intr": [1, 5, 6, 16], "calc": [1, 6, 16, 23, 41, 57, 67], "oopt": 1, "non": [1, 13, 41, 49, 58, 64, 67], "zero": [1, 13, 16, 17, 64, 67], "send": [1, 2, 10, 16], "proc": [1, 58], "field": [1, 10, 13, 15, 16, 17, 21, 22, 23, 24, 41, 54, 55, 57, 58, 59, 60, 66], "outn": 1, "local": [1, 10, 11, 13, 24, 25, 31, 32, 37, 41, 42, 45, 47, 48, 54, 55, 56, 57, 59, 60, 61, 62, 66], "3": [1, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 16, 17, 18, 19, 21, 22, 23, 24, 25, 26, 32, 41, 42, 45, 47, 53, 54, 55, 56, 57, 58, 59, 60, 63, 64, 65, 66, 67, 68, 69, 70], "epicssign": [1, 4, 13, 16, 17, 21, 24, 35, 38, 41, 53, 54, 57, 58, 59, 70], "flyscan": 1, "taxi_sseq": 1, "userstringseq1": 1, "taxi_swait": 1, "usercalc11": 1, "fly_sseq": 1, "userstringseq2": 1, "fly_swait": 1, "usercalc12": 1, "obj": [1, 6, 15, 17, 22], "wait_for_connect": [1, 6, 10, 13, 16, 17, 21, 22, 23, 38, 54, 55, 56, 59, 60, 61, 62, 66, 68], "alreadi": [1, 3, 6, 11, 21, 23, 33, 47, 66, 67], "enabl": [1, 10, 13, 17, 37, 42, 50, 58, 66, 68], "sseq_en": 1, "userstringseqen": 1, "swait_en": 1, "usercalcen": [1, 23], "follow": [1, 13, 16, 17, 20, 21, 23, 32, 33, 35, 37, 39, 42, 47, 53, 54, 59, 67, 69], "predefin": [1, 42, 54, 59], "pattern": [1, 30, 35, 48, 58], "support": [1, 2, 5, 6, 10, 13, 16, 19, 21, 22, 23, 30, 41, 43, 44, 45, 47, 53, 54, 55, 58, 59, 60, 66, 67, 68], "clear": [1, 13, 16, 17, 22, 55, 60], "previou": [1, 8, 10, 12, 13, 16, 20, 22, 23, 43, 47, 53, 58, 64, 66, 67], "them": [1, 6, 10, 13, 15, 17, 30, 33, 35, 41, 42, 58, 64, 66, 68], "sscanrecord": [1, 22], "have": [1, 2, 3, 6, 7, 9, 10, 12, 13, 15, 16, 21, 22, 24, 32, 33, 34, 36, 38, 39, 40, 41, 42, 44, 45, 47, 53, 54, 55, 56, 58, 59, 60, 61, 64, 66, 67, 68, 69], "intend": 1, "session": [1, 2, 5, 6, 9, 10, 12, 14, 16, 18, 19, 22, 24, 26, 28, 29, 30, 32, 33, 40, 41, 42, 43, 47, 50, 52, 53, 57, 58, 63, 64, 66, 67, 69, 70], "take": [1, 2, 5, 6, 10, 13, 16, 21, 22, 26, 32, 41, 42, 47, 53, 54, 59, 64, 66, 68, 70], "possibli": [1, 10], "normal": [1, 10, 17, 18, 31, 41, 58], "execut": [1, 9, 10, 11, 15, 17, 22, 23, 34, 36, 42, 53, 56, 58, 61, 64, 68, 69], "callback": [1, 5, 6, 7, 9, 10, 12, 14, 15, 16, 18, 19, 21, 22, 23, 40, 41, 43, 49, 54, 55, 56, 57, 59, 60, 61, 62, 63, 64, 65, 66, 67, 69], "thread": [1, 15, 21], "u": [1, 12, 13, 17, 19, 37, 45, 58, 67, 68], "so": [1, 2, 5, 6, 10, 12, 13, 15, 16, 17, 18, 19, 21, 30, 37, 41, 42, 43, 45, 48, 54, 56, 57, 59, 61, 64, 66, 67, 68], "4": [1, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 16, 17, 18, 19, 21, 22, 23, 26, 38, 41, 42, 54, 55, 56, 57, 58, 59, 60, 61, 62, 64, 65, 66, 68, 69, 70], "prep_taxi_fly_simple_delai": 1, "taxi_delay_": 1, "fly_delay_": 1, "2f": [1, 13, 23, 68], "stop": [1, 2, 4, 8, 11, 15, 16, 21, 22, 42, 54, 55, 58, 59, 60, 66, 69], "mv": [1, 6, 13, 14, 16, 17, 21, 23, 24, 57], "forward_link": [1, 13, 58], "output_link": 1, "sleep": [1, 13, 14, 15, 16, 17, 21, 22, 23, 24, 42], "arbitrari": [1, 26], "scanning_r": [1, 5, 6, 8, 13, 16, 23, 41, 57, 58], "input_pv": [1, 6, 13, 16, 22, 23], "prefix": [1, 3, 4, 8, 12, 13, 15, 16, 17, 21, 22, 41, 42, 47, 54, 55, 56, 57, 58, 59, 60, 61, 62, 64, 66, 68, 69], "calcul": [1, 5, 6, 8, 13, 16, 18, 22, 23, 41, 57], "output_execute_opt": 1, "output_link_pv": 1, "process_record": [1, 58], "pvname": [1, 4, 6, 13, 16, 17, 22, 23], "select": [1, 3, 10, 12, 17, 18, 19, 23, 26, 37, 54, 56, 59, 61, 67], "step10": 1, "string_valu": 1, "wait_complet": 1, "output_pv": [1, 13], "nm": [1, 13, 17, 67], "5": [1, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 14, 16, 17, 18, 19, 21, 22, 23, 24, 26, 37, 38, 41, 42, 45, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 66, 67, 68, 69, 70], "6": [1, 3, 5, 6, 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2, "sphinx.domains.math": 2, "sphinx.domains.python": 3, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx.ext.todo": 2, "sphinx.ext.viewcode": 1, "nbsphinx": 4, "sphinx": 57}, "alltitles": {"Changes": [[0, "id1"]], "1.0.2": [[0, "id2"]], "New Features": [[0, "new-features"], [0, "id3"]], "Maintenance": [[0, "maintenance"], [0, "id4"]], "v1.0.1": [[0, "v1-0-1"]], "Breaking Changes": [[0, "breaking-changes"]], "Fixes": [[0, "fixes"]], "v1.0.0": [[0, "v1-0-0"]], "Notice": [[0, "notice"]], "APS fly scans with taxi & fly busy records": [[1, "APS-fly-scans-with-taxi-&-fly-busy-records"]], "Overview": [[1, "Overview"], [13, "Overview"], [16, "Overview"], [22, "Overview"], [53, "overview"], [58, "overview"]], "Bluesky (Python) setup": [[1, "Bluesky-(Python)-setup"]], "EPICS IOC": [[1, "EPICS-IOC"]], "The busy record": [[1, "The-busy-record"]], "Procedure \u2013 Delay a short time": [[1, "Procedure----Delay-a-short-time"]], "SseqRecord": [[1, "SseqRecord"]], "SwaitRecord": [[1, "SwaitRecord"]], "Connect with EPICS": [[1, "Connect-with-EPICS"], [58, "connect-with-epics"]], "Write the plan that prepares EPICS": [[1, "Write-the-plan-that-prepares-EPICS"]], "The reset() method": [[1, "The-reset()-method"]], "Run the preparation plan": [[1, "Run-the-preparation-plan"], [1, "id1"]], "Run taxi & fly scan plan": [[1, "Run-taxi-&-fly-scan-plan"]], "Procedure \u2013 step scan scaler & motor": [[1, "Procedure----step-scan-scaler-&-motor"]], "scaler record": [[1, "scaler-record"]], "motor record": [[1, "motor-record"]], "sscan record": [[1, "sscan-record"]], "Write a preparation plan for the step scan": [[1, "Write-a-preparation-plan-for-the-step-scan"]], "Run the taxi & fly scan": [[1, "Run-the-taxi-&-fly-scan"]], "Collect the data": [[1, "Collect-the-data"]], "Run the complete taxi/fly scan": [[1, "Run-the-complete-taxi/fly-scan"]], "Plot the data from the last scan": [[1, "Plot-the-data-from-the-last-scan"]], "Exporting data from Bluesky": [[2, "exporting-data-from-bluesky"]], "Choices": [[2, "choices"]], "databroker-pack": [[2, "databroker-pack"]], "Identify experiment data in databroker": [[2, "identify-experiment-data-in-databroker"]], "file export": [[2, "file-export"]], "text files": [[2, "text-files"]], "CSV": [[2, "csv"]], "JSON": [[2, "json"]], "SPEC": [[2, "spec"]], "HDF5 files": [[2, "hdf5-files"]], "raw": [[2, "raw"]], "NeXus": [[2, "nexus"]], "DX : Data Exchange": [[2, "dx-data-exchange"]], "Callbacks": [[2, "callbacks"], [30, "callbacks"], [42, "callbacks"]], "apstools": [[2, "apstools"]], "NeXus - NXWriterAPS": [[2, "nexus-nxwriteraps"]], "SPEC: SpecWriterCallback": [[2, "spec-specwritercallback"]], "Export bluesky data to CSV": [[3, "Export-bluesky-data-to-CSV"]], "Export one run to CSV": [[3, "Export-one-run-to-CSV"]], "Search for runs by time": [[3, "Search-for-runs-by-time"]], "Export a list of runs": [[3, "Export-a-list-of-runs"]], "Export run to JSON file": [[3, "Export-run-to-JSON-file"]], "Demo the spec file writer callback": [[4, "Demo-the-spec-file-writer-callback"]], "Watch a temperature : scan temperature v time": [[5, "Watch-a-temperature-:-scan-temperature-v-time"]], "Start the instrument package": [[5, "Start-the-instrument-package"], [6, "Start-the-instrument-package"], [12, "Start-the-instrument-package"], [18, "Start-the-instrument-package"], [19, "Start-the-instrument-package"], [41, "Start-the-instrument-package"], [57, "Start-the-instrument-package"]], "Describe": [[5, "Describe"]], "Count": [[5, "Count"], [11, "count"], [24, "count"], [57, "Count"]], "Adjust the measurement interval": [[5, "Adjust-the-measurement-interval"]], "Collect our measurements": [[5, "Collect-our-measurements"]], "Get the data (from the database)": [[5, "Get-the-data-(from-the-database)"]], "Compute the statistics": [[5, "Compute-the-statistics"], [8, "Compute-the-statistics"]], "XAFS scan": [[6, "XAFS-scan"]], "Energy & k": [[6, "Energy-&-k"]], "Multiple segments": [[6, "Multiple-segments"]], "real-time computation of absorption coefficient": [[6, "real-time-computation-of-absorption-coefficient"]], "xafs() plan": [[6, "xafs()-plan"]], "XAFS scan with bluesky": [[6, "XAFS-scan-with-bluesky"]], "Challenges": [[6, "Challenges"], [10, "Challenges"], [14, "Challenges"]], "References": [[6, "References"], [22, "References"], [22, "id1"]], "Examples": [[7, "examples"]], "Accessing data later, after the measurement": [[8, "Accessing-data-later,-after-the-measurement"]], "Skip the instrument package": [[8, "Skip-the-instrument-package"]], "Access the database": [[8, "Access-the-database"]], "Read the primary data stream of the run": [[8, "Read-the-primary-data-stream-of-the-run"]], "APS Accelerator Information for Beamlines": [[9, "APS-Accelerator-Information-for-Beamlines"]], "Minimal: Scan scaler vs motor": [[10, "Minimal:-Scan-scaler-vs-motor"]], "Connect the motor": [[10, "Connect-the-motor"]], "Connect the scaler": [[10, "Connect-the-scaler"]], "Set the scaler\u2019s counting time": [[10, "Set-the-scaler's-counting-time"]], "labels and the %wa magic command": [[10, "labels-and-the-%wa-magic-command"]], "Prepare to scan": [[10, "Prepare-to-scan"]], "Summary of preparations for scanning": [[10, "Summary-of-preparations-for-scanning"]], "First scan": [[10, "First-scan"]], "Fix a few problems": [[10, "Fix-a-few-problems"]], "Scan with a different counting time : staging": [[10, "Scan-with-a-different-counting-time-:-staging"]], "Custom plan with configurable count time": [[10, "Custom-plan-with-configurable-count-time"]], "First steps with bluesky-queueserver": [[11, "first-steps-with-bluesky-queueserver"]], "One-time setup": [[11, "one-time-setup"]], "Start a monitor on a qserver": [[11, "start-a-monitor-on-a-qserver"]], "Run plans on the qserver": [[11, "run-plans-on-the-qserver"]], "Available devices and plans": [[11, "available-devices-and-plans"]], "Scan": [[11, "scan"]], "Shutdown the queue server": [[11, "shutdown-the-queue-server"]], "Count the scaler": [[12, "Count-the-scaler"]], "A closer look at the EPICS scaler": [[12, "A-closer-look-at-the-EPICS-scaler"]], "use ophyd to count the scaler": [[12, "use-ophyd-to-count-the-scaler"]], "use bluesky (the package) to count the scaler": [[12, "use-bluesky-(the-package)-to-count-the-scaler"]], "Heater Simulation using synApps epid and transform records": [[13, "Heater-Simulation-using-synApps-epid-and-transform-records"]], "Schematic": [[13, "Schematic"]], "Implementation": [[13, "Implementation"]], "PID Control Loops": [[13, "PID-Control-Loops"]], "ophyd interface": [[13, "ophyd-interface"]], "Setup the heater and pid": [[13, "Setup-the-heater-and-pid"]], "heater as positioner": [[13, "heater-as-positioner"]], "ramp the temperature": [[13, "ramp-the-temperature"]], "Thermal profile": [[13, "Thermal-profile"]], "Custom bluesky plan": [[14, "Custom-bluesky-plan"]], "Preparation": [[14, "Preparation"], [67, "Preparation"]], "Select scaler channels": [[14, "Select-scaler-channels"]], "Count time": [[14, "Count-time"]], "Construct the plan": [[14, "Construct-the-plan"]], "Run": [[14, "Run"]], "Linux Command & Wait for Finish": [[15, "Linux-Command-&-Wait-for-Finish"]], "1. Example shell command": [[15, "1.-Example-shell-command"]], "2. Run from Python subprocess": [[15, "2.-Run-from-Python-subprocess"]], "3. As ophyd.Signal": [[15, "3.-As-ophyd.Signal"]], "4. As ophyd.Device": [[15, "4.-As-ophyd.Device"]], "5. Run with bluesky": [[15, "5.-Run-with-bluesky"]], "Dynamic Limits for Two Motors": [[16, "Dynamic-Limits-for-Two-Motors"]], "Summary": [[16, "Summary"], [54, "Summary"], [55, "Summary"], [56, "Summary"], [59, "Summary"], [60, "Summary"], [61, "Summary"]], "EPICS setup": [[16, "EPICS-setup"]], "Bluesky setup": [[16, "Bluesky-setup"]], "Custom Bluesky plan for \\theta:2\\theta scan": [[16, "Custom-Bluesky-plan-for-\\theta:2\\theta-scan"]], "Try to provoke a permit denied": [[16, "Try-to-provoke-a-permit-denied"]], "Create a suspender": [[16, "Create-a-suspender"]], "Conclusion": [[16, "Conclusion"]], "Images, Darks, & whites with EPICS area detector, ophyd, and Bluesky": [[17, "Images,-Darks,-&-whites-with-EPICS-area-detector,-ophyd,-and-Bluesky"]], "Setup": [[17, "Setup"], [67, "Setup"]], "Notebook-specific details": [[17, "Notebook-specific-details"]], "XML Attributes File": [[17, "XML-Attributes-File"]], "XML Layout File": [[17, "XML-Layout-File"]], "Ophyd Device Setup": [[17, "Ophyd-Device-Setup"]], "Support Functions": [[17, "Support-Functions"]], "Configure PV for the Frame Type": [[17, "Configure-PV-for-the-Frame-Type"]], "Create Detector Object": [[17, "Create-Detector-Object"]], "Create RunEngine": [[17, "Create-RunEngine"]], "Review the Configurations": [[17, "Review-the-Configurations"]], "Acquire Images with Standard bp.count() Plan": [[17, "Acquire-Images-with-Standard-bp.count()-Plan"]], "Use Ophyd to Acquire Image Frames": [[17, "Use-Ophyd-to-Acquire-Image-Frames"]], "Install Support for Custom Frame Types": [[17, "Install-Support-for-Custom-Frame-Types"]], "Start Data Acquisition": [[17, "Start-Data-Acquisition"]], "Collect Different Frame Types": [[17, "Collect-Different-Frame-Types"]], "End Data Acquisition": [[17, "End-Data-Acquisition"]], "Use Bluesky to Acquire Image Frames": [[17, "Use-Bluesky-to-Acquire-Image-Frames"]], "Custom Bluesky Plan": [[17, "Custom-Bluesky-Plan"]], "Acquire Image Frames with Bluesky": [[17, "Acquire-Image-Frames-with-Bluesky"]], "Lineup a 1-D peak : scan detector v motor": [[18, "Lineup-a-1-D-peak-:-scan-detector-v-motor"]], "About the noisy peak": [[18, "About-the-noisy-peak"]], "2-pass scan": [[18, "2-pass-scan"]], "Multi-pass scan": [[18, "Multi-pass-scan"]], "Locate peak on 2-D area detector image": [[19, "Locate-peak-on-2-D-area-detector-image"]], "View the image": [[19, "View-the-image"]], "Get the run": [[19, "Get-the-run"]], "Primary stream": [[19, "Primary-stream"]], "Get the image data": [[19, "Get-the-image-data"]], "Image frame": [[19, "Image-frame"]], "Show the image": [[19, "Show-the-image"], [66, "Show-the-image"]], "Center & size of spot": [[19, "Center-&-size-of-spot"]], "Next Steps": [[19, "Next-Steps"]], "Plot x, y data from a databroker run": [[20, "Plot-x,-y-data-from-a-databroker-run"]], "1. Show what data catalogs are available": [[20, "1.-Show-what-data-catalogs-are-available"]], "2. Choose a specific run from a catalog": [[20, "2.-Choose-a-specific-run-from-a-catalog"]], "3. Show the (primary) data": [[20, "3.-Show-the-(primary)-data"]], "4. Get data for the x and y axes": [[20, "4.-Get-data-for-the-x-and-y-axes"]], "5. Use MatPlotLib": [[20, "5.-Use-MatPlotLib"]], "6. Plot (x,y) using matplotlib": [[20, "6.-Plot-(x,y)-using-matplotlib"]], "7. Plotting function": [[20, "7.-Plotting-function"]], "synApps busy record": [[21, "synApps-busy-record"]], "arbitrary operation": [[21, "arbitrary-operation"]], "operation uses trigger() method": [[21, "operation-uses-trigger()-method"]], "positioner movement": [[21, "positioner-movement"]], "synApps sscan as 1D Flyer": [[22, "synApps-sscan-as-1D-Flyer"]], "Load the instrument package": [[22, "Load-the-instrument-package"]], "Bluesky step scan": [[22, "Bluesky-step-scan"]], "sscan as Bluesky Flyer": [[22, "sscan-as-Bluesky-Flyer"]], "Simulate a temperature controller with an EPICS swait record": [[23, "Simulate-a-temperature-controller-with-an-EPICS-swait-record"]], "Connect with a swait record": [[23, "Connect-with-a-swait-record"]], "Create a function to setup the controller": [[23, "Create-a-function-to-setup-the-controller"]], "Setup our controller": [[23, "Setup-our-controller"]], "temperature as a positioner": [[23, "temperature-as-a-positioner"]], "Change the setpoint": [[23, "Change-the-setpoint"]], "Move the temperature as a positioner": [[23, "Move-the-temperature-as-a-positioner"]], "Use the temperature positioner with a bluesky plan": [[23, "Use-the-temperature-positioner-with-a-bluesky-plan"]], "SimulatedTransformControllerPositioner device": [[23, "SimulatedTransformControllerPositioner-device"]], "Bluesky Cheat Sheet": [[24, "bluesky-cheat-sheet"]], "Read": [[24, "read"], [57, "Read"]], "Move": [[24, "move"], [57, "Move"]], "List, Describe, Summary": [[24, "list-describe-summary"], [57, "List,-Describe,-Summary"]], "Bluesky Plans vs. Command-line Actions": [[24, "bluesky-plans-vs-command-line-actions"]], "Log files": [[24, "log-files"], [41, "Log-files"]], "Getting started": [[25, "getting-started"]], "How to start a Bluesky session?": [[25, "how-to-start-a-bluesky-session"], [45, "how-to-start-a-bluesky-session"]], "Use blueskyStarter.sh to start a console session": [[25, "use-blueskystarter-sh-to-start-a-console-session"]], "Use blueskyStarter.sh to start a notebook session": [[25, "use-blueskystarter-sh-to-start-a-notebook-session"]], "How-To Guides": [[26, "how-to-guides"]], "APS Bluesky Training": [[27, "aps-bluesky-training"]], "About": [[27, "about"]], "Python __init__.py files": [[28, "python-init-py-files"]], "instrument/collection.py": [[28, "instrument-collection-py"]], "instrument/queueserver.py": [[28, "instrument-queueserver-py"]], "Activate the bluesky conda environment": [[29, "activate-the-bluesky-conda-environment"]], "Configure bluesky instrument": [[30, "configure-bluesky-instrument"]], "Initial configuration of the instrument": [[30, "initial-configuration-of-the-instrument"]], "Parts of the instrument package": [[30, "parts-of-the-instrument-package"]], "matplotlib": [[30, "matplotlib"]], "Devices": [[30, "devices"]], "Plans": [[30, "plans"]], "Utils": [[30, "utils"]], "Setup your databroker catalog configuration": [[31, "setup-your-databroker-catalog-configuration"]], "Create bluesky directory": [[32, "create-bluesky-directory"]], "Create a bluesky IPython profile": [[33, "create-a-bluesky-ipython-profile"]], "Create a File System Soft Link": [[34, "create-a-file-system-soft-link"]], "Start a Bluesky Console Session": [[34, "start-a-bluesky-console-session"]], "The ${HOME}/bin directory": [[34, "the-home-bin-directory"]], "File system links": [[34, "file-system-links"]], "Translate Previous SPEC Configuration": [[35, "translate-previous-spec-configuration"]], "Setup catalog configuration for databroker": [[36, "setup-catalog-configuration-for-databroker"]], "Start software version control": [[37, "start-software-version-control"]], "Test that Bluesky Works at APS": [[38, "test-that-bluesky-works-at-aps"]], "Test the new bluesky instrument": [[39, "test-the-new-bluesky-instrument"]], "Test the New Bluesky Instrument": [[40, "test-the-new-bluesky-instrument"]], "The instrument package for Bluesky Data Acquisition": [[41, "The-instrument-package-for-Bluesky-Data-Acquisition"]], "Description": [[41, "Description"]], "iconfig": [[41, "iconfig"], [42, "iconfig"]], "adsimdet": [[41, "adsimdet"]], "scaler1": [[41, "scaler1"]], "temperature": [[41, "temperature"], [57, "temperature"]], "motors": [[41, "motors"]], "noisy": [[41, "noisy"]], "plans": [[41, "plans"]], "SPEC data files": [[41, "SPEC-data-files"]], "User Code File": [[41, "User-Code-File"]], "databroker": [[41, "databroker"]], "Instrument Package Guide": [[42, "instrument-package-guide"]], "Basic Structure": [[42, "basic-structure"]], "Add Motor(s)": [[42, "add-motor-s"]], "Add Scaler(s)": [[42, "add-scaler-s"]], "Re-organize into Devices": [[42, "re-organize-into-devices"]], "Add Area Detector(s)": [[42, "add-area-detector-s"]], "Other Device Support": [[42, "other-device-support"]], "Implement Custom Plans": [[42, "implement-custom-plans"]], "Review Metadata": [[42, "review-metadata"]], "Experiment-specific User Code": [[42, "experiment-specific-user-code"]], "Instrument": [[43, "instrument"]], "Install New Instrument": [[44, "install-new-instrument"]], "Installation checklist": [[44, "installation-checklist"]], "Next steps \u2026": [[44, "next-steps"]], "Frequently Asked Questions": [[45, "frequently-asked-questions"]], "How to install Bluesky?": [[45, "how-to-install-bluesky"]], "How to create an alias to start a bluesky session?": [[45, "how-to-create-an-alias-to-start-a-bluesky-session"]], "How to create an alias to activate the bluesky environment?": [[45, "how-to-create-an-alias-to-activate-the-bluesky-environment"]], "In python, what are classes, objects, methods and instances?": [[45, "in-python-what-are-classes-objects-methods-and-instances"]], "What is bash?": [[45, "what-is-bash"]], "What does the (~) mean in a path?": [[45, "what-does-the-mean-in-a-path"]], "How to understand a timestamp?": [[45, "how-to-understand-a-timestamp"]], "APS Data Management": [[46, "aps-data-management"]], "Create bluesky environment": [[47, "create-bluesky-environment"]], "Activate conda": [[47, "activate-conda"]], "Install the bluesky environment": [[47, "install-the-bluesky-environment"]], "Create an alias to activate the bluesky environment": [[47, "create-an-alias-to-activate-the-bluesky-environment"]], "Other reading": [[47, "other-reading"]], "Git Advice for APS beam lines": [[48, "git-advice-for-aps-beam-lines"]], "Beamline GitHub organizations": [[48, "beamline-github-organizations"]], "APS GitLab": [[48, "aps-gitlab"]], "Guides": [[48, "guides"]], "Bluesky: Brief Introduction": [[49, "bluesky-brief-introduction"]], "Motivation": [[49, "motivation"]], "Principal parts of The Bluesky framework": [[49, "principal-parts-of-the-bluesky-framework"]], "How does it work?": [[49, "how-does-it-work"]], "How does Bluesky fit in?": [[49, "how-does-bluesky-fit-in"]], "Configure IPython Profile for Bluesky": [[50, "configure-ipython-profile-for-bluesky"]], "Python snippet to start instrument for data collection": [[50, "python-snippet-to-start-instrument-for-data-collection"]], "Create IPython Profile for Bluesky": [[50, "create-ipython-profile-for-bluesky"]], "Add a single Python file to the startup directory": [[50, "add-a-single-python-file-to-the-startup-directory"]], "Other resources": [[51, "other-resources"]], "Reference": [[52, "reference"], [53, "reference"]], "APS Bluesky 101 - Presenter\u2019s Notes": [[53, "aps-bluesky-101-presenter-s-notes"]], "Syllabus": [[53, "syllabus"]], "Before the class": [[53, "before-the-class"]], "Covered here": [[53, "covered-here"]], "Not covered here": [[53, "not-covered-here"]], "Community": [[53, "community"]], "Information": [[53, "information"]], "Basic, Part A: Scaler and Count": [[54, "Basic,-Part-A:-Scaler-and-Count"]], "Starting this session in a Jupyter notebook": [[54, "Starting-this-session-in-a-Jupyter-notebook"], [59, "Starting-this-session-in-a-Jupyter-notebook"]], "Connect an EPICS scaler": [[54, "Connect-an-EPICS-scaler"], [59, "Connect-an-EPICS-scaler"]], "Get, then Set the count time on the scaler": [[54, "Get,-then-Set-the-count-time-on-the-scaler"], [59, "Get,-then-Set-the-count-time-on-the-scaler"]], "Use Bluesky to count the scaler": [[54, "Use-Bluesky-to-count-the-scaler"], [59, "Use-Bluesky-to-count-the-scaler"]], "Report about the documents emitted from the RunEngine": [[54, "Report-about-the-documents-emitted-from-the-RunEngine"], [59, "Report-about-the-documents-emitted-from-the-RunEngine"]], "Quit the jupyter notebook": [[54, "Quit-the-jupyter-notebook"], [59, "Quit-the-jupyter-notebook"]], "Basic, Part B: Motor and Move": [[55, "Basic,-Part-B:-Motor-and-Move"]], "Basic, Part C: Step Scan with Scaler and Motor": [[56, "Basic,-Part-C:-Step-Scan-with-Scaler-and-Motor"]], "Showing the data": [[56, "Showing-the-data"], [61, "Showing-the-data"]], "Review of Bluesky commands": [[57, "Review-of-Bluesky-commands"]], "motor": [[57, "motor"]], "bluesky": [[57, "bluesky"]], "Custom Devices": [[58, "custom-devices"]], "Form follows function 8": [[58, null]], "Simple Devices": [[58, "simple-devices"]], "Hello, World!": [[58, "hello-world"]], ".read()": [[58, "read"]], ".summary()": [[58, "summary"], [58, "id11"]], ".stage()": [[58, "stage"]], ".unstage()": [[58, "unstage"]], ".wait_for_connection()": [[58, "wait-for-connection"]], "Groupings": [[58, "groupings"]], "Neat Stage 2APD": [[58, "neat-stage-2apd"]], "APS Undulator": [[58, "aps-undulator"]], "APS Dual Undulator": [[58, "aps-dual-undulator"]], "Modify existing Device": [[58, "modify-existing-device"]], "EPICS ai & ao Records": [[58, "epics-ai-ao-records"]], "Lesson 1: scaler and count": [[59, "Lesson-1:-scaler-and-count"]], "Lesson 2: motor and scan": [[60, "Lesson-2:-motor-and-scan"]], "Lesson 3, Part A: Show the data as it is acquired": [[61, "Lesson-3,-Part-A:-Show-the-data-as-it-is-acquired"]], "Lesson 3, Part B: Show Data - Concise Summary": [[62, "Lesson-3,-Part-B:-Show-Data---Concise-Summary"]], "Lesson 4: Basic scan (& plot) of scaler vs. motor": [[63, "Lesson-4:-Basic-scan-(&-plot)-of-scaler-vs.-motor"]], "Lesson 5, Part A: find a peak and lineup": [[64, "Lesson-5,-Part-A:-find-a-peak-and-lineup"]], "Objective": [[64, "Objective"]], "Advanced": [[64, "Advanced"]], "Initialize": [[64, "Initialize"]], "Make a noisy detector": [[64, "Make-a-noisy-detector"]], "1. Use ophyd commands": [[64, "1.-Use-ophyd-commands"]], "motor, move and get position": [[64, "motor,-move-and-get-position"]], "detector, count and get value": [[64, "detector,-count-and-get-value"]], "Find the simulated peak": [[64, "Find-the-simulated-peak"]], "2. Use RunEngine and bluesky plans": [[64, "2.-Use-RunEngine-and-bluesky-plans"]], "Locate the approximate peak position": [[64, "Locate-the-approximate-peak-position"]], "Refine the peak position": [[64, "Refine-the-peak-position"]], "Report the results": [[64, "Report-the-results"]], "Lesson 5, Part B: Custom Plan to Lineup a Peak - Concise Summary": [[65, "Lesson-5,-Part-B:-Custom-Plan-to-Lineup-a-Peak---Concise-Summary"]], "Lesson 6: EPICS area detector": [[66, "Lesson-6:-EPICS-area-detector"]], "Use HDF file saving plugin": [[66, "Use-HDF-file-saving-plugin"]], "Lesson 7: 4-circle diffractometer": [[67, "Lesson-7:-4-circle-diffractometer"]], "The diffractometer object": [[67, "The-diffractometer-object"]], "Operating mode": [[67, "Operating-mode"]], "Wavelength": [[67, "Wavelength"]], "Sample": [[67, "Sample"]], "Reflections": [[67, "Reflections"]], "Forward Solutions": [[67, "Forward-Solutions"]], "Constraints": [[67, "Constraints"]], "Example - 4-circle with LNO_LAO sample": [[67, "Example---4-circle-with-LNO_LAO-sample"]], "use 4-circle geometry": [[67, "use-4-circle-geometry"]], "define the sample": [[67, "define-the-sample"]], "set wavelength": [[67, "set-wavelength"]], "define two reflections": [[67, "define-two-reflections"]], "calculate UB matrix": [[67, "calculate-UB-matrix"]], "calculate (hkl) given motor positions": [[67, "calculate-(hkl)-given-motor-positions"]], "compute the motor positions of the (2 2 1.9) reflection": [[67, "compute-the-motor-positions-of-the-(2-2-1.9)-reflection"]], "sample (2k2) scan, near k=2": [[67, "sample-(2k2)-scan,-near-k=2"]], "Example - epitaxial thin film on substrate": [[67, "Example---epitaxial-thin-film-on-substrate"]], "Connect Bluesky with EPICS": [[68, "Connect-Bluesky-with-EPICS"]], "Fundamentals": [[68, "Fundamentals"]], "EpicsSignal": [[68, "EpicsSignal"]], "EpicsSignalRO": [[68, "EpicsSignalRO"]], "Device and Component": [[68, "Device-and-Component"]], "Hello, World": [[69, "Hello,-World"]], "Tutorials": [[70, "tutorials"]]}, "indexentries": {"example": [[7, "index-0"]], "demonstration": [[26, "index-0"]], "guide": [[26, "index-0"]], "how-to": [[26, "index-0"]], "catalog": [[31, "index-0"]], "databroker": [[31, "index-0"]], "template": [[32, "index-0"]], "instrument package": [[43, "index-0"]], "install": [[44, "index-0"]], "new instrument": [[44, "index-0"]], "faq": [[45, "index-0"]], "snippet": [[50, "index-0"]], "startup": [[50, "index-0"]], "explain": [[52, "index-0"]], "reference": [[52, "index-0"]], "custom ophyd device": [[58, "index-0"]], "kwarg": [[58, "index-1"]], "mixin device": [[58, "index-6"]], "staged": [[58, "index-3"]], "staging": [[58, "index-2"]], "unstage": [[58, "index-4"]], "wait_for_connection": [[58, "index-5"]], "lesson": [[70, "index-0"]], "tutorial": [[70, "index-0"]]}})
\ No newline at end of file
diff --git a/tutor/_lesson1.ipynb b/tutor/_lesson1.ipynb
index e4844ec4..c7a47c8b 100644
--- a/tutor/_lesson1.ipynb
+++ b/tutor/_lesson1.ipynb
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- "iopub.status.busy": "2024-04-28T17:45:31.239027Z",
- "iopub.status.idle": "2024-04-28T17:45:31.251153Z",
- "shell.execute_reply": "2024-04-28T17:45:31.250632Z"
+ "iopub.execute_input": "2024-04-28T18:35:46.251613Z",
+ "iopub.status.busy": "2024-04-28T18:35:46.251247Z",
+ "iopub.status.idle": "2024-04-28T18:35:46.264187Z",
+ "shell.execute_reply": "2024-04-28T18:35:46.263606Z"
}
},
"outputs": [
diff --git a/tutor/_lesson3a.ipynb b/tutor/_lesson3a.ipynb
index 3cb67d0f..73ea3fc4 100644
--- a/tutor/_lesson3a.ipynb
+++ b/tutor/_lesson3a.ipynb
@@ -23,10 +23,10 @@
"execution_count": 1,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.389980Z",
- "iopub.status.busy": "2024-04-28T17:45:34.389464Z",
- "iopub.status.idle": "2024-04-28T17:45:34.570949Z",
- "shell.execute_reply": "2024-04-28T17:45:34.570387Z"
+ "iopub.execute_input": "2024-04-28T18:35:49.562930Z",
+ "iopub.status.busy": "2024-04-28T18:35:49.562473Z",
+ "iopub.status.idle": "2024-04-28T18:35:49.744971Z",
+ "shell.execute_reply": "2024-04-28T18:35:49.744406Z"
}
},
"outputs": [
@@ -62,10 +62,10 @@
"execution_count": 2,
"metadata": {
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- "iopub.execute_input": "2024-04-28T17:45:34.573647Z",
- "iopub.status.busy": "2024-04-28T17:45:34.573178Z",
- "iopub.status.idle": "2024-04-28T17:45:34.588858Z",
- "shell.execute_reply": "2024-04-28T17:45:34.588338Z"
+ "iopub.execute_input": "2024-04-28T18:35:49.747452Z",
+ "iopub.status.busy": "2024-04-28T18:35:49.747071Z",
+ "iopub.status.idle": "2024-04-28T18:35:49.762002Z",
+ "shell.execute_reply": "2024-04-28T18:35:49.761457Z"
}
},
"outputs": [
@@ -101,10 +101,10 @@
"execution_count": 3,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.591090Z",
- "iopub.status.busy": "2024-04-28T17:45:34.590898Z",
- "iopub.status.idle": "2024-04-28T17:45:34.604748Z",
- "shell.execute_reply": "2024-04-28T17:45:34.604185Z"
+ "iopub.execute_input": "2024-04-28T18:35:49.764342Z",
+ "iopub.status.busy": "2024-04-28T18:35:49.763979Z",
+ "iopub.status.idle": "2024-04-28T18:35:49.777740Z",
+ "shell.execute_reply": "2024-04-28T18:35:49.777071Z"
}
},
"outputs": [
@@ -149,10 +149,10 @@
"execution_count": 4,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.606979Z",
- "iopub.status.busy": "2024-04-28T17:45:34.606787Z",
- "iopub.status.idle": "2024-04-28T17:45:34.618576Z",
- "shell.execute_reply": "2024-04-28T17:45:34.618084Z"
+ "iopub.execute_input": "2024-04-28T18:35:49.780165Z",
+ "iopub.status.busy": "2024-04-28T18:35:49.779720Z",
+ "iopub.status.idle": "2024-04-28T18:35:49.791656Z",
+ "shell.execute_reply": "2024-04-28T18:35:49.790999Z"
}
},
"outputs": [
@@ -184,10 +184,10 @@
"execution_count": 5,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.621123Z",
- "iopub.status.busy": "2024-04-28T17:45:34.620629Z",
- "iopub.status.idle": "2024-04-28T17:45:34.633840Z",
- "shell.execute_reply": "2024-04-28T17:45:34.633300Z"
+ "iopub.execute_input": "2024-04-28T18:35:49.794030Z",
+ "iopub.status.busy": "2024-04-28T18:35:49.793677Z",
+ "iopub.status.idle": "2024-04-28T18:35:49.805951Z",
+ "shell.execute_reply": "2024-04-28T18:35:49.805312Z"
}
},
"outputs": [
@@ -221,10 +221,10 @@
"execution_count": 6,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.636288Z",
- "iopub.status.busy": "2024-04-28T17:45:34.635883Z",
- "iopub.status.idle": "2024-04-28T17:45:34.649073Z",
- "shell.execute_reply": "2024-04-28T17:45:34.648407Z"
+ "iopub.execute_input": "2024-04-28T18:35:49.808247Z",
+ "iopub.status.busy": "2024-04-28T18:35:49.807890Z",
+ "iopub.status.idle": "2024-04-28T18:35:49.820340Z",
+ "shell.execute_reply": "2024-04-28T18:35:49.819832Z"
}
},
"outputs": [
@@ -266,10 +266,10 @@
"execution_count": 7,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.651737Z",
- "iopub.status.busy": "2024-04-28T17:45:34.651248Z",
- "iopub.status.idle": "2024-04-28T17:45:34.822835Z",
- "shell.execute_reply": "2024-04-28T17:45:34.822142Z"
+ "iopub.execute_input": "2024-04-28T18:35:49.822765Z",
+ "iopub.status.busy": "2024-04-28T18:35:49.822326Z",
+ "iopub.status.idle": "2024-04-28T18:35:49.988232Z",
+ "shell.execute_reply": "2024-04-28T18:35:49.987561Z"
}
},
"outputs": [
@@ -307,10 +307,10 @@
"execution_count": 8,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.825337Z",
- "iopub.status.busy": "2024-04-28T17:45:34.825134Z",
- "iopub.status.idle": "2024-04-28T17:45:34.838199Z",
- "shell.execute_reply": "2024-04-28T17:45:34.837656Z"
+ "iopub.execute_input": "2024-04-28T18:35:49.990928Z",
+ "iopub.status.busy": "2024-04-28T18:35:49.990543Z",
+ "iopub.status.idle": "2024-04-28T18:35:50.003063Z",
+ "shell.execute_reply": "2024-04-28T18:35:50.002534Z"
}
},
"outputs": [
@@ -342,10 +342,10 @@
"execution_count": 9,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.840575Z",
- "iopub.status.busy": "2024-04-28T17:45:34.840176Z",
- "iopub.status.idle": "2024-04-28T17:45:34.852956Z",
- "shell.execute_reply": "2024-04-28T17:45:34.852404Z"
+ "iopub.execute_input": "2024-04-28T18:35:50.005619Z",
+ "iopub.status.busy": "2024-04-28T18:35:50.005193Z",
+ "iopub.status.idle": "2024-04-28T18:35:50.017913Z",
+ "shell.execute_reply": "2024-04-28T18:35:50.017358Z"
}
},
"outputs": [
@@ -377,10 +377,10 @@
"execution_count": 10,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.855216Z",
- "iopub.status.busy": "2024-04-28T17:45:34.854921Z",
- "iopub.status.idle": "2024-04-28T17:45:34.867720Z",
- "shell.execute_reply": "2024-04-28T17:45:34.867187Z"
+ "iopub.execute_input": "2024-04-28T18:35:50.020393Z",
+ "iopub.status.busy": "2024-04-28T18:35:50.020026Z",
+ "iopub.status.idle": "2024-04-28T18:35:50.032652Z",
+ "shell.execute_reply": "2024-04-28T18:35:50.032126Z"
}
},
"outputs": [
@@ -415,10 +415,10 @@
"execution_count": 11,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.869965Z",
- "iopub.status.busy": "2024-04-28T17:45:34.869615Z",
- "iopub.status.idle": "2024-04-28T17:45:34.881856Z",
- "shell.execute_reply": "2024-04-28T17:45:34.881344Z"
+ "iopub.execute_input": "2024-04-28T18:35:50.035016Z",
+ "iopub.status.busy": "2024-04-28T18:35:50.034643Z",
+ "iopub.status.idle": "2024-04-28T18:35:50.047120Z",
+ "shell.execute_reply": "2024-04-28T18:35:50.046562Z"
}
},
"outputs": [
@@ -450,10 +450,10 @@
"execution_count": 12,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.883981Z",
- "iopub.status.busy": "2024-04-28T17:45:34.883790Z",
- "iopub.status.idle": "2024-04-28T17:45:34.896791Z",
- "shell.execute_reply": "2024-04-28T17:45:34.896158Z"
+ "iopub.execute_input": "2024-04-28T18:35:50.049512Z",
+ "iopub.status.busy": "2024-04-28T18:35:50.049094Z",
+ "iopub.status.idle": "2024-04-28T18:35:50.061499Z",
+ "shell.execute_reply": "2024-04-28T18:35:50.060808Z"
}
},
"outputs": [
@@ -487,10 +487,10 @@
"execution_count": 13,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.899265Z",
- "iopub.status.busy": "2024-04-28T17:45:34.898893Z",
- "iopub.status.idle": "2024-04-28T17:45:34.911262Z",
- "shell.execute_reply": "2024-04-28T17:45:34.910760Z"
+ "iopub.execute_input": "2024-04-28T18:35:50.064263Z",
+ "iopub.status.busy": "2024-04-28T18:35:50.063842Z",
+ "iopub.status.idle": "2024-04-28T18:35:50.076287Z",
+ "shell.execute_reply": "2024-04-28T18:35:50.075773Z"
}
},
"outputs": [
@@ -522,10 +522,10 @@
"execution_count": 14,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.913553Z",
- "iopub.status.busy": "2024-04-28T17:45:34.913202Z",
- "iopub.status.idle": "2024-04-28T17:45:34.925169Z",
- "shell.execute_reply": "2024-04-28T17:45:34.924559Z"
+ "iopub.execute_input": "2024-04-28T18:35:50.078546Z",
+ "iopub.status.busy": "2024-04-28T18:35:50.078350Z",
+ "iopub.status.idle": "2024-04-28T18:35:50.090485Z",
+ "shell.execute_reply": "2024-04-28T18:35:50.089840Z"
}
},
"outputs": [
@@ -564,10 +564,10 @@
"execution_count": 15,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.927639Z",
- "iopub.status.busy": "2024-04-28T17:45:34.927273Z",
- "iopub.status.idle": "2024-04-28T17:45:34.939423Z",
- "shell.execute_reply": "2024-04-28T17:45:34.938902Z"
+ "iopub.execute_input": "2024-04-28T18:35:50.093083Z",
+ "iopub.status.busy": "2024-04-28T18:35:50.092708Z",
+ "iopub.status.idle": "2024-04-28T18:35:50.105135Z",
+ "shell.execute_reply": "2024-04-28T18:35:50.104605Z"
}
},
"outputs": [
@@ -601,10 +601,10 @@
"execution_count": 16,
"metadata": {
"execution": {
- "iopub.execute_input": "2024-04-28T17:45:34.941739Z",
- "iopub.status.busy": "2024-04-28T17:45:34.941362Z",
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- "shell.execute_reply": "2024-04-28T17:45:34.953399Z"
+ "iopub.execute_input": "2024-04-28T18:35:50.107384Z",
+ "iopub.status.busy": "2024-04-28T18:35:50.107081Z",
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+ "shell.execute_reply": "2024-04-28T18:35:50.119315Z"
},
"scrolled": true
},