Cargo.toml

[package]
name = "piscem"
version = "0.11.0"
edition = "2021"
build = "build.rs"
repository = "https://github.com/COMBINE-lab/piscem"

[build-dependencies]
cmake = "0.1.52"

# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html

[dependencies]
num_cpus = "1.16.0"
anyhow = "1.0.93"
clap = { version = "4.5.21", features = [
  "cargo",
  "derive",
  "env",
  "wrap_help",
] }
tracing = "0.1.40"
tracing-subscriber = { version = "0.3.18", default-features = true, features = [
  "env-filter",
] }
prepare_fasta = "0.1.0"

[profile.release]
lto = "thin"
opt-level = 3

# generated by 'cargo dist init'
[profile.dist]
inherits = "release"

# Config for 'dist'
[workspace.metadata.dist]
# The preferred dist version to use in CI (Cargo.toml SemVer syntax)
cargo-dist-version = "0.24.1"
# The installers to generate for each app
installers = ["shell"]
# Target platforms to build apps for (Rust target-triple syntax)
targets = [
  "aarch64-apple-darwin",
  "x86_64-apple-darwin",
  "x86_64-unknown-linux-gnu",
]
# The archive format to use for non-windows builds (defaults .tar.xz)
unix-archive = ".tar.gz"
# CI backends to support
ci = "github"
# Which actions to run on pull requests
pr-run-mode = "plan"
# Whether to install an updater program
install-updater = true
# Generate and dist a source tarball
source-tarball = false
# Path that installers should place binaries in
install-path = "CARGO_HOME"
## since this is cross-language and 
## we are not including C++ debug 
## symbols, this currently doesn't work 
## and would be of limited utility anyway.
# debug = true
# split-debuginfo = "packed"

[[workspace.metadata.dist.extra-artifacts]]
artifacts = ["source.tar.gz", "source.tar.gz.sha256"]
build = [
  "bash",
  "scripts/git-archive-all.sh",
  "--format",
  "tar.gz",
  "--prefix",
  "piscem/",
  "source.tar.gz",
]

[workspace.metadata.dist.github-custom-runners]
aarch64-apple-darwin = "macos-14"

[workspace.metadata.dist.dependencies.homebrew]
autoconf = { version = "2.72", stage = [
  "build",
  "run",
], targets = [
  "aarch64-apple-darwin",
] }
automake = { version = "1.16.5", stage = [
  "build",
  "run",
], targets = [
  "aarch64-apple-darwin",
] }
coreutils = { stage = ["build"] }
gnu-tar = { stage = ["build"] }