DESCRIPTION

Type: Package
Package: idDMR
Title: Methylation Analysis Methods for Illumina Microarray Data
Version: 0.5.0
Authors@R: c(
    person("Daniel", "Alhassan", , "daanmq@mst.edu", role = c("cre", "aut"),
           comment = c(ORCID = "0000-0003-0944-5818")),
    person("Gayla", "Olbricht", , "olbrichtg@mst.edu", role = "ths",
           comment = c(ORCID = "0000-0002-1213-2241")),
    person("Akim", "Adekpedjou", , "akima@mst.edu", role = "ths",
           comment = c(ORCID = "0000-0001-9584-4297")),      
    person("Ebenezer", "Agbozo", , "eagbozo@urfu.ru", role = "aut",
           comment = c(ORCID = "0000-0002-2413-3815"))
  )
Maintainer: Daniel Alhassan <daanmq@mst.edu>
Description: A system that uses a normalized kernel-weighted statistic for
    detecting and identifing differentially methylated regions (DMRs) in
    the human genome for Illumina's Infinium 450K and EPIC array.
License: GPL (>= 3)
URL: https://github.com/DanielAlhassan/idDMR
Depends: 
    R (>= 4.0.0)
biocViews: biocViews: DifferentialMethylation, GeneExpression, Microarray, MethylationArray, Genetics, DifferentialExpression, GenomeAnnotation, DNAMethylation, OneChannel, TwoChannel, MultipleComparison, QualityControl, TimeCourse, Sequencing, WholeGenome, Epigenetics, Coverage, Preprocessing, DataImport   
Imports: 
     ExperimentHub, GenomeInfoDb, limma, edgeR, minfi, missMethyl, GenomicRanges, plyr, dplyr, magrittr, Gviz, IRanges, stats, utils, S4Vectors, methods, graphics, SummarizedExperiment
Suggests: 
    BiocGenerics,
    BiocStyle,
    DMRcatedata,
    IlluminaHumanMethylation450kanno.ilmn12.hg19,
    IlluminaHumanMethylationEPICanno.ilm10b4.hg19,
    knitr,
    rmarkdown,
    RUnit,
    testthat (>= 3.0.0)
VignetteBuilder: knitr    
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.0.9000
Config/testthat/edition: 3
BugReports: https://github.com/DanielAlhassan/idDMR/issues