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pyproject.toml
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pyproject.toml
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# ********** Please don't edit this file!
# ********** It has been generated automatically by dae_devops version 0.5.3.
# ********** For repository_name chimpflow
[build-system]
requires = ["setuptools>=64", "setuptools_scm[toml]>=6.2", "wheel"]
build-backend = "setuptools.build_meta"
[project]
name = "chimpflow"
classifiers = [
"Development Status :: 3 - Alpha",
"License :: OSI Approved :: Apache Software License",
"Programming Language :: Python :: 3.10",
]
description = "Service which polls the database for subwell images which need to have the chimp detector run on them."
dependencies = ["xchem-chimp", "xchembku", "dls_servbase", "dls_mainiac", "dls_multiconf", "dls_utilpack"]
dynamic = ["version"]
license.file = "LICENSE"
readme = "README.md"
requires-python = ">=3.10"
[project.optional-dependencies]
dev = [
"black==22.12.0",
"mypy",
"flake8-isort",
"Flake8-pyproject",
"pipdeptree",
"pre-commit",
"pytest-cov",
"pydocstyle[toml]",
"tox-direct",
"types-mock",
"types-PyYAML",
]
docs = [
"pydata-sphinx-theme>=0.12",
"sphinx-argparse",
"sphinx-autobuild",
"sphinx-copybutton",
"sphinx-design",
"tox-direct",
"nbsphinx",
"pandoc",
"ipykernel",
"h5py",
"matplotlib",
]
[project.scripts]
chimpflow = "chimpflow_lib.__main__:main"
"chimpflow.cli" = "chimpflow_cli.main:main"
[project.urls]
GitLab = "https://github.com/diamondlightsource/chimpflow/chimpflow"
[[project.authors]] # Further authors may be added by duplicating this section
email = "[email protected]"
name = "David Erb"
[tool.setuptools_scm]
write_to = "src/chimpflow_lib/_version.py"
[tool.mypy]
ignore_missing_imports = true # Ignore missing stubs in imported modules
[tool.isort]
float_to_top = true
profile = "black"
[tool.flake8]
extend-ignore = [
"E501", # Allow long lines that black doesn't fix.
"E203", # See https://github.com/PyCQA/pycodestyle/issues/373
"F811", # support typing.overload decorator
"F722", # allow Annotated[typ, some_func("some string")]
]
max-line-length = 88 # Respect black's line length (default 88),
exclude = [".tox", "venv"]
[tool.pytest.ini_options]
# Run pytest with all our checkers, and don't spam us with massive tracebacks on error
addopts = " --tb=native -vv --doctest-modules --doctest-glob=\"*.rst\"\n --cov=chimpflow_lib --cov-report term --cov-report xml:cov.xml\n "
# https://iscinumpy.gitlab.io/post/bound-version-constraints/#watch-for-warnings
filterwarnings = "error"
# Doctest python code in docs, python code in src docstrings, test functions in tests
testpaths = "docs src tests"
[tool.coverage.run]
data_file = "/tmp/chimpflow_lib.coverage"
[tool.coverage.paths]
# Tests are run from installed location, map back to the src directory
source = ["src", "**/site-packages/"]
# tox must currently be configured via an embedded ini string
# See: https://github.com/tox-dev/tox/issues/999
[tool.tox]
legacy_tox_ini = "[tox]\nskipsdist=True\n\n[testenv:{pre-commit,mypy,pytest,docs}]\n# Don't create a virtualenv for the command, requires tox-direct plugin\ndirect = True\npassenv = *\nallowlist_externals = \n pytest \n pre-commit\n mypy\n sphinx-build\n sphinx-autobuild\ncommands =\n pytest: pytest {posargs}\n mypy: mypy src tests {posargs}\n pre-commit: pre-commit run --all-files {posargs}\n docs: sphinx-{posargs:build -EW --keep-going} -T docs build/html\n"
# dae_devops_fingerprint 40e120808487c93f2e5299ac8d1ae3c0