ref1 in function cumNormStatFast() - Means or Medians?

[andrebolerbarros]

I've been reviewing the function cumNormStatFast, in order to get the CSS normalization. When going through, I found that ref1 is determined as rowMeans; however, in the original formula, ref1 refers to q-l, defined as median of _l_th quantile across samples.

Is that supposed to be like this? Or am I just understanding it wrongly?

Thanks!

[jnpaulson]

Thanks! The function is correct. Best,

…

On Tue, Jan 15, 2019 at 7:52 PM André Barros ***@***.***> wrote: I've been reviewing the function cumNormStatFast, in order to get the CSS normalization. When going through, I found that ref1 is determined as rowMeans; however, in the original formula, ref1 refers to q-l, defined as median of _l_th quantile across samples. Is that supposed to be like this? Or am I just understanding it wrongly? Thanks! — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#63>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AC5hgwdbtsnLC3xv1nvMJGnZG77j9WzNks5vDiNQgaJpZM4aBle3> .