Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Error in Matilda implementation docs #6

Open
ivango17 opened this issue Nov 15, 2024 · 1 comment
Open

Error in Matilda implementation docs #6

ivango17 opened this issue Nov 15, 2024 · 1 comment

Comments

@ivango17
Copy link

# using the trained model for data simulation
python main_matilda_task.py  --rna [trainRNA] --adt [trainADT] --atac [trainATAC] --cty [traincty] --simulation True --simulation_ct 1 --simulation_num 200
# Example run
python main_matilda_task.py --rna ../data/TEAseq/train_rna.h5 --adt ../data/TEAseq/train_adt.h5 --atac ../data/TEAseq/train_atac.h5 --cty ../data/TEAseq/train_cty.csv --simulation True --simulation_ct 1 --simulation_num 200

In this code section, simulation_ct option should be -1 I believe.

@liuchunlei0430
Copy link
Collaborator

Thanks a lot for pointing this out. We have already updated.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants