documentation_workflow.yml

name: Documentation
on: [push, pull_request]

jobs:
  MakeDocs:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v3
      - name: Setup R
        uses: r-lib/actions/setup-r@v2-branch
        with:
          r-version: '4.1.0'
      - name: Create Documentation directory
        run: |
          echo "Creating 'Documentation'"
          mkdir -p documentation
      - name: Install dependencies
        run: |
          echo "Installing R package dependencies. Scripts might have additional dependencies installed."
          Rscript -e 'if (!require(knitr)) install.packages("knitr")'
          Rscript -e 'if (!require(markdown)) install.packages("markdown")'
      - name: Remove old documentation
        run: 'rm -rf documentation/*'
      - name: Generate new documentation
        run: 'Rscript .github/scripts/doc_builder.r'
      - name: Commit Documentation
        run: |
          git diff-index --quiet HEAD && exit
          echo "Setting up Git to push changes."
          git config --global user.name 'autoprettier'
          git config --global user.email 'actions@github.com'
          git remote set-url origin https://x-access-token:${{ secrets.GITHUB_TOKEN }}@github.com/$GITHUB_REPOSITORY
          echo "Staging documentation"
          git add documentation/ # This is the only directory that has changes and should be staged
          git commit -m "Update documentation" || true
          git push || true