MissingDependencyError

[syamak6]

Hi,

When I am using graphein 1.7.7, to construct_graph, I get the error "MissingDependencyError: Missing dependencies: mkdssp".

I am working in colab

I use "dssp_config": DSSPConfig() for the config file.

• Python Version 3.10.12
• Graphein 1.7.7, installed using pip

[a-r-j]

Hi @syamak6 you need to install DSSP: https://anaconda.org/salilab/dssp

[a-r-j]

@syamak6 how did you get on? Can I close the issue?

[syamak6]

Yes.. I was able to move on Thank you

…

On Tue, Dec 24, 2024 at 1:48 AM Arian Jamasb ***@***.***> wrote: @syamak6 <https://github.com/syamak6> how did you get on? Can I close the issue? — Reply to this email directly, view it on GitHub <#416 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AL6PZCQVKVZCXDYJ6H4E2T32HCAMVAVCNFSM6AAAAABTXNHPICVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDKNRQGMZTINJXGQ> . You are receiving this because you were mentioned.Message ID: ***@***.***>

-- Regards Syama