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The cosima-cookbook a collection of Jupyter notebooks that show analyses of ocean and sea ice model output. The focus is on the models run by the members of COSIMA: Consortium for Ocean-Sea Ice Modelling in Australia
Contributions of new notebooks or analysis scripts are welcomed.
See Getting Started for information on using the cosima-cookbook.
These notebooks are designed to run on NCI Virtual Desktop Infrastructure (VDI).
The standard git merge and diff tools don't work well with Jupyter notebooks, so it's better to install content-aware merge and diff using nbdime. On VDI, bring up a terminal (e.g. from Jupyter in your browser) and do
pip install --user nbdime
This will install nbdime in ~/.local/bin. If which nbdime shows it can't be found, you'll need to add ~/.local/bin to your path:
edit ~/.bash_profile (e.g. via nano ~/.bash_profile) and add
PATH=$PATH:$HOME/.local/bin/
export PATH
to the end. Save and exit the editor, then source ~/.bash_profile.
Now do
nbdime config-git --enable --global
to set up git to use nbdime for diff and merge.