.gitignore

# Created by https://www.gitignore.io/api/r,perl,linux,macos,python,windows,microsoftoffice
# Edit at https://www.gitignore.io/?templates=r,perl,linux,macos,python,windows,microsoftoffice

### Linux ###
*~

# temporary files which can be created if a process still has a handle open of a deleted file
.fuse_hidden*

# KDE directory preferences
.directory

# Linux trash folder which might appear on any partition or disk
.Trash-*

# .nfs files are created when an open file is removed but is still being accessed
.nfs*

### macOS ###
# General
.DS_Store
.AppleDouble
.LSOverride
*.icloud
# Thumbnails
._*

# Files that might appear in the root of a volume
.DocumentRevisions-V100
.fseventsd
.Spotlight-V100
.TemporaryItems
.Trashes
.VolumeIcon.icns
.com.apple.timemachine.donotpresent

# Directories potentially created on remote AFP share
.AppleDB
.AppleDesktop
Network Trash Folder
Temporary Items
.apdisk

### MicrosoftOffice ###
*.tmp

# Word temporary
~$*.doc*

# Word Auto Backup File
Backup of *.doc*

# Excel temporary
~$*.xls*

# Excel Backup File
*.xlk

# PowerPoint temporary
~$*.ppt*

# Visio autosave temporary files
*.~vsd*

### Perl ###
!Build/
.last_cover_stats
/META.yml
/META.json
/MYMETA.*
*.o
*.pm.tdy
*.bs

# Devel::Cover
cover_db/

# Devel::NYTProf
nytprof.out

# Dizt::Zilla
/.build/

# Module::Build
_build/
Build
Build.bat

# Module::Install
inc/

# ExtUtils::MakeMaker
/blib/
/_eumm/
/*.gz
/Makefile
/Makefile.old
/MANIFEST.bak
/pm_to_blib
/*.zip

### Python ###
# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class

# C extensions
*.so

# Distribution / packaging
.Python
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
wheels/
pip-wheel-metadata/
share/python-wheels/
*.egg-info/
.installed.cfg
*.egg
MANIFEST

# PyInstaller
#  Usually these files are written by a python script from a template
#  before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec

# Installer logs
pip-log.txt
pip-delete-this-directory.txt

# Unit test / coverage reports
htmlcov/
.tox/
.nox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*.cover
.hypothesis/
.pytest_cache/

# Translations
*.mo
*.pot

# Scrapy stuff:
.scrapy

# Sphinx documentation
docs/_*
docs/source/_autosummary

# PyBuilder
target/

# pyenv
.python-version

# pipenv
#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
#   However, in case of collaboration, if having platform-specific dependencies or dependencies
#   having no cross-platform support, pipenv may install dependencies that don't work, or not
#   install all needed dependencies.
#Pipfile.lock

# celery beat schedule file
celerybeat-schedule

# SageMath parsed files
*.sage.py

# Spyder project settings
.spyderproject
.spyproject

# Rope project settings
.ropeproject

# Mr Developer
.mr.developer.cfg
.project
.pydevproject

# mkdocs documentation
/site

# mypy
.mypy_cache/
.dmypy.json
dmypy.json

# Pyre type checker
.pyre/

### R ###
# History files
.Rhistory
.Rapp.history

# Session Data files
.RData

# User-specific files
.Ruserdata

# Example code in package build process
*-Ex.R

# Output files from R CMD build
/*.tar.gz

# Output files from R CMD check
/*.Rcheck/

# RStudio files
.Rproj.user/

# produced vignettes
vignettes/*.html
vignettes/*.pdf

# OAuth2 token, see https://github.com/hadley/httr/releases/tag/v0.3
.httr-oauth

# knitr and R markdown default cache directories
*_cache/
/cache/

# Temporary files created by R markdown
*.utf8.md
*.knit.md

### R.Bookdown Stack ###
# R package: bookdown caching files
/*_files/

### Windows ###
# Windows thumbnail cache files
Thumbs.db
Thumbs.db:encryptable
ehthumbs.db
ehthumbs_vista.db

# Dump file
*.stackdump

# Folder config file
[Dd]esktop.ini

# Recycle Bin used on file shares
$RECYCLE.BIN/

# Windows Installer files
*.cab
*.msi
*.msix
*.msm
*.msp

# Windows shortcuts
*.lnk

# End of https://www.gitignore.io/api/r,perl,linux,macos,python,windows,microsoftoffice

.vscode/settings.json
temp.py
temp.txt
temp-BICF-JG-LE4350.txt

.idea/*
.idea/
.vscode/launch.json

# Custom Ignore
*.log
*.icloud
src/navigate/log_files/LOGS
*.tiff
*.ipynb
*.tif
test.n5
test_dir
test.xml
*_log.txt