Releases: biolab/orange3-bioinformatics
Releases · biolab/orange3-bioinformatics
Release 4.4.0
Changed
- #282: (OWGenialisExpressions) use CollectionTables to fetch data
Release 4.3.1
Release 4.2.0
Fixed
- #267: (OWGenialisExpressions) Fixed animation toggle.
Changed
- #269: (OWGenialisExpressions) Changed default window size.
- #274: (OWGenialisExpressions) Use number of samples/genes as quantiles in Quantile transformation.
Added
- #268: (OWGenialisExpressions) Use Orange.widgets.credentials.CredentialManager to securely store user password.
- #270: (OWGenialisExpressions) Additionally, filter data objects by process type and input annotations.
- #272, #276: (OWGenialisExpressions) Rename table attributes when matching genes and display report.
Other
The release includes some other minor bug fixes and project maintenance.
4.1.0
Fixed
- #214: Fixed a problem in OWGEODatasets with filter component, related isue.
- #233: Fixed output summary and stop showing links if they are not available, related isue.
- #231: Properly use gene matcher in dictyExpress widget.
- #237: Fixed a problem with enrichment. Results from Gene Set Enrichemnt and GOBrowser widgets are now consistent, related isue.
- #241: OWGEODatasets: Remove
wrapreimplementation. - #242: Marker genes settings migration.
Changed
- #215: Bump minimum version of point-annotator module.
- #216: Update icon for Gene Set Enrichment widget.
- #221: Update icons for Volcano plot and Annotate Projection widgets.
- #260: Update icon for dictyExpress widget.
- #219: Complete redesign of Marker Genes widget.
- #244: Unify add-on descriptions, related isue.
Added
- #215: Add support for sparse data in Annotation module.
- #245: setup Github Actions and tox.
- #252: Add GenialisExpressions widget, project status.
4.1.0a1
Merge pull request #231 from JakaKokosar/fix/owdictyexpress [FIX] OWdictyExpress: use match_table_column from gene matcher module.
4.0.0
Release 4.0.0
4.0.0a1
setup.cfg: fix unknown classifier