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Support aliases for systemCode for webservice #36

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ariutta opened this issue Dec 14, 2016 · 2 comments
Open
2 tasks

Support aliases for systemCode for webservice #36

ariutta opened this issue Dec 14, 2016 · 2 comments
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enhancement New feature or request

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@ariutta
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ariutta commented Dec 14, 2016

To make the webservice easier to use, let's look into supporting aliases for systemCode for the webservice. This can be broken into two parts:

  1. support conventionalName (e.g., Entrez Gene)
  2. support Miriam namespace (e.g., ncbigene) and identifiers.org IRI (e.g., http://identifiers.org/ncbigene/)

The first one should be easy to set up, because it already works for all endpoints except possibly xrefsBatch. But it needs to be tested with the all variations of xrefsBatch.

The second one would be a little more involved. It would mean returning the same results for all of the following endpoints:
http://webservice.bridgedb.org/Human/xrefs/L/1234
http://webservice.bridgedb.org/Human/xrefs/Entrez%20Gene/1234
http://webservice.bridgedb.org/Human/xrefs/ncbigene/1234
http://webservice.bridgedb.org/Human/xrefs/http%3A%2F%2Fidentifiers.org%2Fncbigene%2F/1234

@ariutta ariutta added bug Something isn't working enhancement New feature or request labels Dec 14, 2016
@ariutta ariutta changed the title Support aliases for systemCode for webservice Support aliases for systemCode for webservice Dec 14, 2016
@egonw egonw removed the bug Something isn't working label Jul 11, 2017
@egonw
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egonw commented Mar 31, 2018

@Chris-Evelo, we earlier this week discussed support for this. I't been on the schedule for a while now.

@Chris-Evelo
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Would be really good indeed. Think the last one should also work in the "www" form

@egonw egonw transferred this issue from bridgedb/BridgeDb Jul 25, 2024
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