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external_iterator.go
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external_iterator.go
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// Copyright 2022 The LevelDB-Go and Pebble Authors. All rights reserved. Use
// of this source code is governed by a BSD-style license that can be found in
// the LICENSE file.
package estore
import (
"context"
"fmt"
"sort"
"github.com/cockroachdb/errors"
"github.com/edgelesssys/estore/internal/base"
"github.com/edgelesssys/estore/internal/keyspan"
"github.com/edgelesssys/estore/internal/manifest"
"github.com/edgelesssys/estore/sstable"
)
// ExternalIterOption provide an interface to specify open-time options to
// NewExternalIter.
type ExternalIterOption interface {
// iterApply is called on the iterator during opening in order to set internal
// parameters.
iterApply(*Iterator)
// readerOptions returns any reader options added by this iter option.
readerOptions() []sstable.ReaderOption
}
type externalIterReaderOptions struct {
opts []sstable.ReaderOption
}
func (e *externalIterReaderOptions) iterApply(iterator *Iterator) {
// Do nothing.
}
func (e *externalIterReaderOptions) readerOptions() []sstable.ReaderOption {
return e.opts
}
// ExternalIterReaderOptions returns an ExternalIterOption that specifies
// sstable.ReaderOptions to be applied on sstable readers in NewExternalIter.
func ExternalIterReaderOptions(opts ...sstable.ReaderOption) ExternalIterOption {
return &externalIterReaderOptions{opts: opts}
}
// ExternalIterForwardOnly is an ExternalIterOption that specifies this iterator
// will only be used for forward positioning operations (First, SeekGE, Next).
// This could enable optimizations that take advantage of this invariant.
// Behaviour when a reverse positioning operation is done on an iterator
// opened with this option is unpredictable, though in most cases it should.
type ExternalIterForwardOnly struct{}
func (e ExternalIterForwardOnly) iterApply(iter *Iterator) {
iter.forwardOnly = true
}
func (e ExternalIterForwardOnly) readerOptions() []sstable.ReaderOption {
return nil
}
// NewExternalIter takes an input 2d array of sstable files which may overlap
// across subarrays but not within a subarray (at least as far as points are
// concerned; range keys are allowed to overlap arbitrarily even within a
// subarray), and returns an Iterator over the merged contents of the sstables.
// Input sstables may contain point keys, range keys, range deletions, etc. The
// input files slice must be sorted in reverse chronological ordering. A key in a
// file at a lower index subarray will shadow a key with an identical user key
// contained within a file at a higher index subarray. Each subarray must be
// sorted in internal key order, where lower index files contain keys that sort
// left of files with higher indexes.
//
// Input sstables must only contain keys with the zero sequence number.
//
// Iterators constructed through NewExternalIter do not support all iterator
// options, including block-property and table filters. NewExternalIter errors
// if an incompatible option is set.
func NewExternalIter(
o *Options,
iterOpts *IterOptions,
files [][]sstable.ReadableFile,
extraOpts ...ExternalIterOption,
) (it *Iterator, err error) {
return NewExternalIterWithContext(context.Background(), o, iterOpts, files, extraOpts...)
}
// NewExternalIterWithContext is like NewExternalIter, and additionally
// accepts a context for tracing.
func NewExternalIterWithContext(
ctx context.Context,
o *Options,
iterOpts *IterOptions,
files [][]sstable.ReadableFile,
extraOpts ...ExternalIterOption,
) (it *Iterator, err error) {
if iterOpts != nil {
if err := validateExternalIterOpts(iterOpts); err != nil {
return nil, err
}
}
var readers [][]*sstable.Reader
// Ensure we close all the opened readers if we error out.
defer func() {
if err != nil {
for i := range readers {
for j := range readers[i] {
_ = readers[i][j].Close()
}
}
}
}()
seqNumOffset := 0
var extraReaderOpts []sstable.ReaderOption
for i := range extraOpts {
extraReaderOpts = append(extraReaderOpts, extraOpts[i].readerOptions()...)
}
for _, levelFiles := range files {
seqNumOffset += len(levelFiles)
}
for _, levelFiles := range files {
var subReaders []*sstable.Reader
seqNumOffset -= len(levelFiles)
subReaders, err = openExternalTables(o, levelFiles, seqNumOffset, o.MakeReaderOptions(), extraReaderOpts...)
readers = append(readers, subReaders)
}
if err != nil {
return nil, err
}
buf := iterAllocPool.Get().(*iterAlloc)
dbi := &buf.dbi
*dbi = Iterator{
ctx: ctx,
alloc: buf,
merge: o.Merger.Merge,
comparer: *o.Comparer,
readState: nil,
keyBuf: buf.keyBuf,
prefixOrFullSeekKey: buf.prefixOrFullSeekKey,
boundsBuf: buf.boundsBuf,
batch: nil,
// Add the readers to the Iterator so that Close closes them, and
// SetOptions can re-construct iterators from them.
externalReaders: readers,
newIters: func(
ctx context.Context, f *manifest.FileMetadata, opts *IterOptions,
internalOpts internalIterOpts) (internalIterator, keyspan.FragmentIterator, error) {
// NB: External iterators are currently constructed without any
// `levelIters`. newIters should never be called. When we support
// organizing multiple non-overlapping files into a single level
// (see TODO below), we'll need to adjust this tableNewIters
// implementation to open iterators by looking up f in a map
// of readers indexed by *fileMetadata.
panic("unreachable")
},
seqNum: base.InternalKeySeqNumMax,
}
if iterOpts != nil {
dbi.opts = *iterOpts
dbi.processBounds(iterOpts.LowerBound, iterOpts.UpperBound)
}
for i := range extraOpts {
extraOpts[i].iterApply(dbi)
}
finishInitializingExternal(ctx, dbi)
return dbi, nil
}
func validateExternalIterOpts(iterOpts *IterOptions) error {
switch {
case iterOpts.TableFilter != nil:
return errors.Errorf("pebble: external iterator: TableFilter unsupported")
case iterOpts.PointKeyFilters != nil:
return errors.Errorf("pebble: external iterator: PointKeyFilters unsupported")
case iterOpts.RangeKeyFilters != nil:
return errors.Errorf("pebble: external iterator: RangeKeyFilters unsupported")
case iterOpts.OnlyReadGuaranteedDurable:
return errors.Errorf("pebble: external iterator: OnlyReadGuaranteedDurable unsupported")
case iterOpts.UseL6Filters:
return errors.Errorf("pebble: external iterator: UseL6Filters unsupported")
}
return nil
}
func createExternalPointIter(ctx context.Context, it *Iterator) (internalIterator, error) {
// TODO(jackson): In some instances we could generate fewer levels by using
// L0Sublevels code to organize nonoverlapping files into the same level.
// This would allow us to use levelIters and keep a smaller set of data and
// files in-memory. However, it would also require us to identify the bounds
// of all the files upfront.
if !it.opts.pointKeys() {
return emptyIter, nil
} else if it.pointIter != nil {
return it.pointIter, nil
}
mlevels := it.alloc.mlevels[:0]
if len(it.externalReaders) > cap(mlevels) {
mlevels = make([]mergingIterLevel, 0, len(it.externalReaders))
}
for _, readers := range it.externalReaders {
var combinedIters []internalIterator
for _, r := range readers {
var (
rangeDelIter keyspan.FragmentIterator
pointIter internalIterator
err error
)
// We could set hideObsoletePoints=true, since we are reading at
// InternalKeySeqNumMax, but we don't bother since these sstables should
// not have obsolete points (so the performance optimization is
// unnecessary), and we don't want to bother constructing a
// BlockPropertiesFilterer that includes obsoleteKeyBlockPropertyFilter.
pointIter, err = r.NewIterWithBlockPropertyFiltersAndContextEtc(
ctx, it.opts.LowerBound, it.opts.UpperBound, nil, /* BlockPropertiesFilterer */
false /* hideObsoletePoints */, false, /* useFilterBlock */
&it.stats.InternalStats, sstable.TrivialReaderProvider{Reader: r})
if err != nil {
return nil, err
}
rangeDelIter, err = r.NewRawRangeDelIter()
if err != nil {
return nil, err
}
if rangeDelIter == nil && pointIter != nil && it.forwardOnly {
// TODO(bilal): Consider implementing range key pausing in
// simpleLevelIter so we can reduce mergingIterLevels even more by
// sending all sstable iterators to combinedIters, not just those
// corresponding to sstables without range deletes.
combinedIters = append(combinedIters, pointIter)
continue
}
mlevels = append(mlevels, mergingIterLevel{
iter: pointIter,
rangeDelIter: rangeDelIter,
})
}
if len(combinedIters) == 1 {
mlevels = append(mlevels, mergingIterLevel{
iter: combinedIters[0],
})
} else if len(combinedIters) > 1 {
sli := &simpleLevelIter{
cmp: it.cmp,
iters: combinedIters,
}
sli.init(it.opts)
mlevels = append(mlevels, mergingIterLevel{
iter: sli,
rangeDelIter: nil,
})
}
}
if len(mlevels) == 1 && mlevels[0].rangeDelIter == nil {
// Set closePointIterOnce to true. This is because we're bypassing the
// merging iter, which turns Close()s on it idempotent for any child
// iterators. The outer Iterator could call Close() on a point iter twice,
// which sstable iterators do not support (as they release themselves to
// a pool).
it.closePointIterOnce = true
return mlevels[0].iter, nil
}
it.alloc.merging.init(&it.opts, &it.stats.InternalStats, it.comparer.Compare, it.comparer.Split, mlevels...)
it.alloc.merging.snapshot = base.InternalKeySeqNumMax
if len(mlevels) <= cap(it.alloc.levelsPositioned) {
it.alloc.merging.levelsPositioned = it.alloc.levelsPositioned[:len(mlevels)]
}
return &it.alloc.merging, nil
}
func finishInitializingExternal(ctx context.Context, it *Iterator) {
pointIter, err := createExternalPointIter(ctx, it)
if err != nil {
it.pointIter = &errorIter{err: err}
} else {
it.pointIter = pointIter
}
it.iter = it.pointIter
if it.opts.rangeKeys() {
it.rangeKeyMasking.init(it, it.comparer.Compare, it.comparer.Split)
var rangeKeyIters []keyspan.FragmentIterator
if it.rangeKey == nil {
// We could take advantage of the lack of overlaps in range keys within
// each slice in it.externalReaders, and generate keyspan.LevelIters
// out of those. However, since range keys are expected to be sparse to
// begin with, the performance gain might not be significant enough to
// warrant it.
//
// TODO(bilal): Explore adding a simpleRangeKeyLevelIter that does not
// operate on FileMetadatas (similar to simpleLevelIter), and implements
// this optimization.
for _, readers := range it.externalReaders {
for _, r := range readers {
if rki, err := r.NewRawRangeKeyIter(); err != nil {
rangeKeyIters = append(rangeKeyIters, &errorKeyspanIter{err: err})
} else if rki != nil {
rangeKeyIters = append(rangeKeyIters, rki)
}
}
}
if len(rangeKeyIters) > 0 {
it.rangeKey = iterRangeKeyStateAllocPool.Get().(*iteratorRangeKeyState)
it.rangeKey.init(it.comparer.Compare, it.comparer.Split, &it.opts)
it.rangeKey.rangeKeyIter = it.rangeKey.iterConfig.Init(
&it.comparer,
base.InternalKeySeqNumMax,
it.opts.LowerBound, it.opts.UpperBound,
&it.hasPrefix, &it.prefixOrFullSeekKey,
false /* internalKeys */, &it.rangeKey.internal,
)
for i := range rangeKeyIters {
it.rangeKey.iterConfig.AddLevel(rangeKeyIters[i])
}
}
}
if it.rangeKey != nil {
it.rangeKey.iiter.Init(&it.comparer, it.iter, it.rangeKey.rangeKeyIter,
keyspan.InterleavingIterOpts{
Mask: &it.rangeKeyMasking,
LowerBound: it.opts.LowerBound,
UpperBound: it.opts.UpperBound,
})
it.iter = &it.rangeKey.iiter
}
}
}
func openExternalTables(
o *Options,
files []sstable.ReadableFile,
seqNumOffset int,
readerOpts sstable.ReaderOptions,
extraReaderOpts ...sstable.ReaderOption,
) (readers []*sstable.Reader, err error) {
readers = make([]*sstable.Reader, 0, len(files))
for i := range files {
readable, err := sstable.NewSimpleReadable(files[i])
if err != nil {
return readers, err
}
r, err := sstable.NewReader(readable, readerOpts, extraReaderOpts...)
if err != nil {
return readers, err
}
// Use the index of the file in files as the sequence number for all of
// its keys.
r.Properties.GlobalSeqNum = uint64(len(files) - i + seqNumOffset)
readers = append(readers, r)
}
return readers, err
}
// simpleLevelIter is similar to a levelIter in that it merges the points
// from multiple point iterators that are non-overlapping in the key ranges
// they return. It is only expected to support forward iteration and forward
// regular seeking; reverse iteration and prefix seeking is not supported.
// Intended to be a low-overhead, non-FileMetadata dependent option for
// NewExternalIter. To optimize seeking and forward iteration, it maintains
// two slices of child iterators; one of all iterators, and a subset of it that
// contains just the iterators that contain point keys within the current
// bounds.
//
// Note that this levelIter does not support pausing at file boundaries
// in case of range tombstones in this file that could apply to points outside
// of this file (and outside of this level). This is sufficient for optimizing
// the main use cases of NewExternalIter, however for completeness it would make
// sense to build this pausing functionality in.
type simpleLevelIter struct {
cmp Compare
err error
lowerBound []byte
iters []internalIterator
filtered []internalIterator
firstKeys [][]byte
firstKeysBuf []byte
currentIdx int
}
var _ internalIterator = &simpleLevelIter{}
// init initializes this simpleLevelIter.
func (s *simpleLevelIter) init(opts IterOptions) {
s.currentIdx = 0
s.lowerBound = opts.LowerBound
s.resetFilteredIters()
}
func (s *simpleLevelIter) resetFilteredIters() {
s.filtered = s.filtered[:0]
s.firstKeys = s.firstKeys[:0]
s.firstKeysBuf = s.firstKeysBuf[:0]
s.err = nil
for i := range s.iters {
var iterKey *base.InternalKey
if s.lowerBound != nil {
iterKey, _ = s.iters[i].SeekGE(s.lowerBound, base.SeekGEFlagsNone)
} else {
iterKey, _ = s.iters[i].First()
}
if iterKey != nil {
s.filtered = append(s.filtered, s.iters[i])
bufStart := len(s.firstKeysBuf)
s.firstKeysBuf = append(s.firstKeysBuf, iterKey.UserKey...)
s.firstKeys = append(s.firstKeys, s.firstKeysBuf[bufStart:bufStart+len(iterKey.UserKey)])
} else if err := s.iters[i].Error(); err != nil {
s.err = err
}
}
}
func (s *simpleLevelIter) SeekGE(
key []byte, flags base.SeekGEFlags,
) (*base.InternalKey, base.LazyValue) {
if s.err != nil {
return nil, base.LazyValue{}
}
// Find the first file that is entirely >= key. The file before that could
// contain the key we're looking for.
n := sort.Search(len(s.firstKeys), func(i int) bool {
return s.cmp(key, s.firstKeys[i]) <= 0
})
if n > 0 {
s.currentIdx = n - 1
} else {
s.currentIdx = n
}
if s.currentIdx < len(s.filtered) {
if iterKey, val := s.filtered[s.currentIdx].SeekGE(key, flags); iterKey != nil {
return iterKey, val
}
if err := s.filtered[s.currentIdx].Error(); err != nil {
s.err = err
}
s.currentIdx++
}
return s.skipEmptyFileForward(key, flags)
}
func (s *simpleLevelIter) skipEmptyFileForward(
seekKey []byte, flags base.SeekGEFlags,
) (*base.InternalKey, base.LazyValue) {
var iterKey *base.InternalKey
var val base.LazyValue
for s.currentIdx >= 0 && s.currentIdx < len(s.filtered) && s.err == nil {
if seekKey != nil {
iterKey, val = s.filtered[s.currentIdx].SeekGE(seekKey, flags)
} else if s.lowerBound != nil {
iterKey, val = s.filtered[s.currentIdx].SeekGE(s.lowerBound, flags)
} else {
iterKey, val = s.filtered[s.currentIdx].First()
}
if iterKey != nil {
return iterKey, val
}
if err := s.filtered[s.currentIdx].Error(); err != nil {
s.err = err
}
s.currentIdx++
}
return nil, base.LazyValue{}
}
func (s *simpleLevelIter) SeekPrefixGE(
prefix, key []byte, flags base.SeekGEFlags,
) (*base.InternalKey, base.LazyValue) {
panic("unimplemented")
}
func (s *simpleLevelIter) SeekLT(
key []byte, flags base.SeekLTFlags,
) (*base.InternalKey, base.LazyValue) {
panic("unimplemented")
}
func (s *simpleLevelIter) First() (*base.InternalKey, base.LazyValue) {
if s.err != nil {
return nil, base.LazyValue{}
}
s.currentIdx = 0
return s.skipEmptyFileForward(nil /* seekKey */, base.SeekGEFlagsNone)
}
func (s *simpleLevelIter) Last() (*base.InternalKey, base.LazyValue) {
panic("unimplemented")
}
func (s *simpleLevelIter) Next() (*base.InternalKey, base.LazyValue) {
if s.err != nil {
return nil, base.LazyValue{}
}
if s.currentIdx < 0 || s.currentIdx >= len(s.filtered) {
return nil, base.LazyValue{}
}
if iterKey, val := s.filtered[s.currentIdx].Next(); iterKey != nil {
return iterKey, val
}
s.currentIdx++
return s.skipEmptyFileForward(nil /* seekKey */, base.SeekGEFlagsNone)
}
func (s *simpleLevelIter) NextPrefix(succKey []byte) (*base.InternalKey, base.LazyValue) {
if s.err != nil {
return nil, base.LazyValue{}
}
if s.currentIdx < 0 || s.currentIdx >= len(s.filtered) {
return nil, base.LazyValue{}
}
if iterKey, val := s.filtered[s.currentIdx].NextPrefix(succKey); iterKey != nil {
return iterKey, val
}
s.currentIdx++
return s.skipEmptyFileForward(succKey /* seekKey */, base.SeekGEFlagsNone)
}
func (s *simpleLevelIter) Prev() (*base.InternalKey, base.LazyValue) {
panic("unimplemented")
}
func (s *simpleLevelIter) Error() error {
if s.currentIdx >= 0 && s.currentIdx < len(s.filtered) {
s.err = firstError(s.err, s.filtered[s.currentIdx].Error())
}
return s.err
}
func (s *simpleLevelIter) Close() error {
var err error
for i := range s.iters {
err = firstError(err, s.iters[i].Close())
}
return err
}
func (s *simpleLevelIter) SetBounds(lower, upper []byte) {
s.currentIdx = -1
s.lowerBound = lower
for i := range s.iters {
s.iters[i].SetBounds(lower, upper)
}
s.resetFilteredIters()
}
func (s *simpleLevelIter) String() string {
if s.currentIdx < 0 || s.currentIdx >= len(s.filtered) {
return "simpleLevelIter: current=<nil>"
}
return fmt.Sprintf("simpleLevelIter: current=%s", s.filtered[s.currentIdx])
}
var _ internalIterator = &simpleLevelIter{}