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Create comprehensive test examples for VRS 2.0 #10

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tnavatar opened this issue Oct 15, 2024 · 0 comments
Open

Create comprehensive test examples for VRS 2.0 #10

tnavatar opened this issue Oct 15, 2024 · 0 comments
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ASHG-2024 ASHG GKS Unconference 2024

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@tnavatar
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Submitter Name

Tristan Nelson

Submitter Affiliation

Geisinger

Project Details

Right now there are a small number of data examples that can be used to validate an implementation of VRS:

https://github.com/ga4gh/vrs/blob/2.x/validation/models.yaml

I don't think this set of examples is sufficient to validate a new implementation of VRS (or even the existing VRS-python). It would be good to take this example and create a broader set of variants and VRS entities to allow for implementations that can confidently support the VRS specification.

Required Skills

Knowledge of sources of genetic variation would be helpful to generate examples, otherwise using VRS Python to create some of these examples would be useful as well.

@korikuzma korikuzma added the ASHG-2024 ASHG GKS Unconference 2024 label Nov 7, 2024
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