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data_file.go
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data_file.go
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package avro
import (
"bufio"
"bytes"
"compress/flate"
"errors"
"fmt"
"io"
"io/ioutil"
"math"
"os"
)
// Support decoding the avro Object Container File format.
// Spec: http://avro.apache.org/docs/1.7.7/spec.html#Object+Container+Files
const objHeaderSchemaRaw = `{"type": "record", "name": "org.apache.avro.file.Header",
"fields" : [
{"name": "magic", "type": {"type": "fixed", "name": "Magic", "size": 4}},
{"name": "meta", "type": {"type": "map", "values": "bytes"}},
{"name": "sync", "type": {"type": "fixed", "name": "Sync", "size": 16}}
]
}`
var objHeaderSchema = Prepare(MustParseSchema(objHeaderSchemaRaw))
const (
containerMagicVersion byte = 1
containerSyncSize = 16
schemaKey = "avro.schema"
codecKey = "avro.codec"
)
var magic = []byte{'O', 'b', 'j', containerMagicVersion}
// DataFileReader is a reader for Avro Object Container Files.
// More here: https://avro.apache.org/docs/current/spec.html#Object+Container+Files
type DataFileReader struct {
r io.Reader
sharedCopyBuf []byte
header *objFileHeader
block *DataBlock
dec Decoder
datum DatumReader
codec fileCodec
err error
}
var codecs = map[string]fileCodec{
"": nullCodec{},
"null": nullCodec{},
"deflate": flateCodec{},
}
// The header for object container files
type objFileHeader struct {
Magic []byte `avro:"magic"`
Meta map[string][]byte `avro:"meta"`
Sync []byte `avro:"sync"`
}
func readObjFileHeader(dec Decoder) (*objFileHeader, error) {
reader := NewSpecificDatumReader().SetSchema(objHeaderSchema)
header := &objFileHeader{}
err := reader.Read(header, dec)
return header, err
}
// NewDataFileReader enables reading an object container file from the filesystem.
// May return an error if the file contains invalid data or is just missing.
//
// The second DatumReader argument is deprecated, only there for source compatibility.
// Will be removed in an upcoming compatibility break.
func NewDataFileReader(filename string, ignoreMe ...DatumReader) (*DataFileReader, error) {
if len(ignoreMe) > 1 {
return nil, errors.New("Not supported sending multiple readers")
} else if len(ignoreMe) == 1 {
switch ignoreMe[0].(type) {
case *GenericDatumReader, *SpecificDatumReader, *anyDatumReader:
// nothing
break
default:
return nil, fmt.Errorf("Datum reader input deprecated, don't know what to do with %#v", ignoreMe[0])
}
}
f, err := os.Open(filename)
if err != nil {
return nil, err
}
reader, err := newDataFileReader(f)
if err != nil {
// If there's any decoding issues, try not leaking a file handle.
f.Close()
}
return reader, err
}
func newDataFileReader(input io.Reader) (reader *DataFileReader, err error) {
dec := NewBinaryDecoderReader(input) // Since dec doesn't buffer, we can share it.
reader = &DataFileReader{
sharedCopyBuf: make([]byte, 4096),
r: input,
dec: dec,
}
if reader.header, err = readObjFileHeader(dec); err != nil {
return nil, fmt.Errorf("DataFileReader: Error reading header: %s", err.Error())
}
if !bytes.Equal(reader.header.Magic, magic) {
return nil, ErrNotAvroFile // TODO: consider formatting error magic value in
}
schema, err := ParseSchema(string(reader.header.Meta[schemaKey]))
if err != nil {
return nil, err
}
reader.datum = NewDatumReader(schema)
codecName := string(reader.header.Meta[codecKey])
if codec := codecs[codecName]; codec == nil {
return nil, fmt.Errorf("DataFileReader: Don't know how to decode codec %s", codecName)
} else {
reader.codec = codec
}
if err := reader.NextBlock(); err != nil {
return nil, err
}
return reader, nil
}
func (reader *DataFileReader) stop(err error) error {
reader.err = err
return err
}
// Err returns the last encountered error.
//
// Will not return io.EOF if that was the last error.
func (reader *DataFileReader) Err() error {
if err := reader.err; err == io.EOF {
return nil
} else {
return err
}
}
// HasNext is used in a for loop to know you can continue on.
//
// If there was an I/O or decoding error in decoding a block,
// then HasNext will be false, even if there might be more data
// in the data file.
//
// It might be possible to recover from corrupted data by jumping
// to the next block by using the NextBlock() but this is not
// guaranteed.
func (reader *DataFileReader) HasNext() bool {
if reader.err != nil || reader.block == nil {
return false
}
return reader.advance()
}
func (reader *DataFileReader) advance() bool {
if reader.block == nil {
return false
} else if reader.block.BlockRemaining == 0 {
if err := reader.NextBlock(); err != nil {
return false
}
}
return true
}
// Next reads the next value from file and fills the given value with data.
//
// v can be anything a DatumReader would accept, including a pointer to a
// struct that is compatible with this file's schema, an allocated
// *GenericRecord, or a **GenericRecord (library allocates for you)
//
// Will error with io.EOF if you're past the end, loop HasNext() to prevent.
func (reader *DataFileReader) Next(v interface{}) error {
if !reader.advance() {
return reader.err
}
err := reader.datum.Read(v, reader.block.decoder)
if err != nil {
return err
}
reader.block.BlockRemaining--
return nil
}
// NextBlock tells this DataFileReader to skip current block and move to next one.
//
// This is not typically needed as the Next() loop will automatically advance
// to the next block for you.
//
// May return an error if the block is malformed or io.EOF if no more blocks
// left to read.
func (reader *DataFileReader) NextBlock() error {
if err := reader.actualNextBlock(); err != nil {
return reader.stop(err)
} else {
return err
}
}
// actualNextBlock is separated so we don't need to put reader.stop on all error returns
func (reader *DataFileReader) actualNextBlock() error {
// Close out the current block
if block := reader.block; block != nil {
// Drain out what's remaining into dev/null.
// If we're at the end of a block, shouldn't actually copy anything.
_, err := io.CopyBuffer(ioutil.Discard, block.reader, reader.sharedCopyBuf)
if err != nil {
return err
}
block.runCloser()
// Check the sync data at end of block is equal
syncBuffer := reader.sharedCopyBuf[:containerSyncSize]
_, err = io.ReadFull(reader.r, syncBuffer)
if err != nil {
return err
}
if !bytes.Equal(syncBuffer, reader.header.Sync) {
return fmt.Errorf("was expecting sync %v, got %v", reader.header.Sync, syncBuffer)
}
reader.block = nil
}
// Read counts for the new block
blockCount, err := reader.dec.ReadLong()
if err != nil {
// This is the only time an "unexpected EOF" may actually be expected.
if err == ErrUnexpectedEOF {
err = io.EOF
}
return err
}
blockSize, err := reader.dec.ReadLong()
if err != nil {
return err
}
if blockSize > math.MaxInt32 || blockSize < 0 {
return fmt.Errorf("Block size invalid or too large: %d", blockSize)
}
// Pipeline step 1: io.LimitReader ensures we don't read past the end of the block.
r := io.LimitReader(reader.r, blockSize)
// Pipeline step 2: Buffer for performance on underlying file object.
// Normally, bufio.Reader would read too far, but LimitReader prevents it.
r = bufio.NewReader(r)
// Pipeline step 3: Use any decoder given by the codec for this block
r, closer := reader.codec.CodecReader(r)
block := &DataBlock{
reader: r,
closer: closer,
decoder: NewBinaryDecoderReader(r),
BlockRemaining: blockCount,
NumEntries: blockCount,
BlockSize: int(blockSize),
}
reader.block = block
reader.err = nil
return nil
}
// Close the underlying file if necessary.
//
// Needed with filesystem files if you want to not leak filehandles.
// Returns any error in closing.
func (reader *DataFileReader) Close() error {
if block := reader.block; block != nil {
block.runCloser()
}
if closer, ok := reader.r.(io.Closer); ok {
return closer.Close()
}
return nil
}
////////// DATA FILE WRITER
// DataFileWriter lets you write object container files.
type DataFileWriter struct {
output io.Writer
outputEnc *binaryEncoder
datumWriter DatumWriter
sync []byte
// current block is buffered until flush
blockBuf *bytes.Buffer
blockCount int64
blockEnc *binaryEncoder
}
// NewDataFileWriter creates a new DataFileWriter for given output and schema using the given DatumWriter to write the data to that Writer.
// May return an error if writing fails.
func NewDataFileWriter(output io.Writer, schema Schema, datumWriter DatumWriter) (writer *DataFileWriter, err error) {
encoder := newBinaryEncoder(output)
switch w := datumWriter.(type) {
case *SpecificDatumWriter:
w.SetSchema(schema)
case *GenericDatumWriter:
w.SetSchema(schema)
}
sync := []byte("1234567890abcdef") // TODO come up with other sync value
header := &objFileHeader{
Magic: magic,
Meta: map[string][]byte{
schemaKey: []byte(schema.String()),
codecKey: []byte("null"),
},
Sync: sync,
}
headerWriter := NewSpecificDatumWriter()
headerWriter.SetSchema(objHeaderSchema)
if err = headerWriter.Write(header, encoder); err != nil {
return
}
blockBuf := &bytes.Buffer{}
writer = &DataFileWriter{
output: output,
outputEnc: encoder,
datumWriter: datumWriter,
sync: sync,
blockBuf: blockBuf,
blockEnc: newBinaryEncoder(blockBuf),
}
return
}
// Write out a single datum.
//
// Encoded datums are buffered internally and will not be written to the
// underlying io.Writer until Flush() is called.
func (w *DataFileWriter) Write(v interface{}) error {
w.blockCount++
err := w.datumWriter.Write(v, w.blockEnc)
return err
}
// Flush out any previously written datums to our underlying io.Writer.
// Does nothing if no datums had previously been written.
//
// It's up to the library user to decide how often to flush; doing it
// often will spend a lot of time on tiny I/O but save memory.
func (w *DataFileWriter) Flush() error {
if w.blockCount > 0 {
return w.actuallyFlush()
}
return nil
}
func (w *DataFileWriter) actuallyFlush() error {
// Write the block count and length directly to output
w.outputEnc.WriteLong(w.blockCount)
w.outputEnc.WriteLong(int64(w.blockBuf.Len()))
// copy the buffer which is the block buf to output
_, err := io.Copy(w.output, w.blockBuf)
if err != nil {
return err
}
// write the sync bytes
_, err = w.output.Write(w.sync)
if err != nil {
return err
}
w.blockBuf.Reset() // allow blockbuf's internal memory to be reused
w.blockCount = 0
return nil
}
// Close this DataFileWriter.
// This is required to finish out the data file format.
// After Close() is called, this DataFileWriter cannot be used anymore.
func (w *DataFileWriter) Close() error {
err := w.Flush() // flush anything remaining
if err == nil {
// Do an empty flush to signal end of data file format
err = w.actuallyFlush()
if err == nil {
// Clean up references.
w.output, w.outputEnc, w.datumWriter = nil, nil, nil
w.blockBuf, w.blockEnc = nil, nil
}
}
return err
}
type fileCodec interface {
CodecReader(io.Reader) (io.Reader, func())
}
type nullCodec struct{}
func (nullCodec) CodecReader(r io.Reader) (io.Reader, func()) {
return r, nil
}
type flateCodec struct{}
func (flateCodec) CodecReader(r io.Reader) (io.Reader, func()) {
flateReader := flate.NewReader(r)
return flateReader, func() { flateReader.Close() }
}
// DataBlock is a structure that holds a certain amount of entries and the actual buffer to read from.
type DataBlock struct {
reader io.Reader
closer func()
decoder Decoder
// Number of entries encoded in Data.
NumEntries int64
// Size of data buffer in bytes.
BlockSize int
// Number of unread entries in this DataBlock.
BlockRemaining int64
}
func (block *DataBlock) runCloser() {
if block.closer != nil {
block.closer()
block.closer = nil
}
}