environment.yaml

name: base
channels:
  - conda-forge
  - pytorch
  - pyg
dependencies:
  # python version specified in Dockerfile
  - coffea=2024.4.1
  - rucio-clients
  - voms # x509 proxy system
  - ca-policy-lcg # WLCG trusted CAs
  - xrootd
  - htcondor
  # jupyter-related
  - jupyterlab
  - ipympl
  - dask_labextension
  - dask-gateway
  - dask-jobqueue
  - bokeh
  - nb_conda_kernels
  # Add workqueue
  - ndcctools
    # core scipy
    #- nomkl # no Intel math kernel library, reduces image size
  - numpy
  - scipy
  - pandas
  # compression
  - brotli
  - bzip2
  - gzip
  - lz4
  - python-xxhash
  - xz
  - zstandard
  # file formats
  - h5py
  - uproot
  # misc.
  - pytables
  - python-rapidjson
  - geventhttpclient
  - correctionlib
  - python-graphviz
  # scikit-hep
  - awkward
  - vector
  - hist
  # ML
  - xgboost
  - pytorch
  - torch-scatter
  - pytorch-sparse
  - pytorch-cluster
  - pyg
  - pytorch-spline-conv
  # software development
  - autoconf
  - cmake
  - gdb
  - git
  - gxx
  - make
  # utilities
  - curl
  - inotify-tools
  - nano
  - ncdu
  - pip
  - rsync
  - supervisor
  - tar
  - vim
  - pip:
    - fastjet # to be added to conda-forge: https://github.com/scikit-hep/fastjet/issues/133
    - tritonclient[all]
    - tflite-runtime==2.14.0
    - onnxruntime
    - fsspec-xrootd