16.343

• added link to changelog to release.sh
• Changed version file to 16.343
• changed interdomain to interchain
• added interdomain option to compute only inter-domain(chain) links
• changed error to warning when a linktype does not correspond to any atom. Added attention sign at the end.
• added default chain=0 if the chain is not specified.
• added change log to release.sh

16.341

• Changed version file to 16.341
• fixed bug in remove_path
• removed unused variables
• prints link atoms with linker to facilitate visualization

16.333.2

• Changed version file to 16.333.2
• increased precision of dbond to convergence and sigma of chain atoms
• added extended path for other atoms than CA, and now only exits if dbond_maxviol is satsified.
• fixed bug in setsigma and skip all atoms if the reference is N, C or O
• fixed skip and call of goverlapcell (important)
• fixed title format

16.333

• Changed version file to 16.333
• fixed initialization of seed
• prints accessibility by residue instead of by atom
• prints file of residue accessibility to solvent
• changed mimic sigma to 1.5
• fixed initialization of accessiblity of link atoms
• implemented mimicchain
• prints accessibility of atoms
• fixed output format for non-accessible links
• calling solventaccess
• fixed calling of skip in main program
• solventaccess working fine
• removed temporary file
• trying to implement a more sofisticated way to recognize solvent accessibility
• adding routine for determining solvent accessibility

16.330.2

• Changed version file to 16.330.2
• fixed calling of setskip
• fixed bug in string length

16.330

• Changed version file to 16.330
• removed old skipping from overlapcell routines
• added setskip routine
• removed blank line
• added gitingore file
• replaced file_operations with newer version