Tandem repeat sequence too short at chr14_MATERNAL:107,224,612-107,233,706 #679
Labels
large_error
This issue describes a poor quality or misassembled region in the assembly
v1.0
This is an issue/error in the hg002v1.0 assembly
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Issue location in assembly (use format chromosome:start-end, e.g., chr13_MATERNAL:3740148-9625296)
chr14_MATERNAL:107224612-107233706
Description of the issue
Sniffles predicts two insertions of about 100bp in this roughly 15kb-long 16bp tandem repeat, it likely sequence needs to be added to the assembly. It's hard to tell from the reads where the insertion should be, though:
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