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Missing ~172bp sequence in chr1_PATERNAL:8561421-8561474 #681

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jzook opened this issue May 6, 2024 · 0 comments
Open
1 task done

Missing ~172bp sequence in chr1_PATERNAL:8561421-8561474 #681

jzook opened this issue May 6, 2024 · 0 comments
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large_error This issue describes a poor quality or misassembled region in the assembly v1.0 This is an issue/error in the hg002v1.0 assembly

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@jzook
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jzook commented May 6, 2024

Have you confirmed that this issue hasn't already been reported?

  • I have confirmed in the UCSC browser hub that this is a new issue (required)

Issue location in assembly (use format chromosome:start-end, e.g., chr13_MATERNAL:3740148-9625296)

chr1_PATERNAL:8561421-8561474

Description of the issue

complex error, with ~172bp ins and 2bp and 4bp dels nearby
Screenshot 2024-05-05 at 11 06 54 PM
@jzook jzook added v1.0 This is an issue/error in the hg002v1.0 assembly large_error This issue describes a poor quality or misassembled region in the assembly labels May 6, 2024
@jzook jzook changed the title Larger localized issue in the hg002v1.0 assembly Missing ~172bp sequence in chr1_PATERNAL:8561421-8561474 May 6, 2024
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large_error This issue describes a poor quality or misassembled region in the assembly v1.0 This is an issue/error in the hg002v1.0 assembly
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