Code cleanup

3.5.0

cleanup for release 4.0

rebuild for 13.3

performance and functionality of tractography

rebuild of documentation.

tractography updates

3.3.0

dix fix

finalize bids process for DTI, Dixon and T2mapping

3.2.0

version update

demonstration update

small bug fixes and alignment of demonstration notebook with code updates

final muscle bids v1

completed muscle bids functionality for motion study

Muscle Bids and Dixon

major changes to dixon and optimization of muscle bids.

needs documentation update!

Introduction of Muscle-Bids

Update to include Muscle-Bids support, Extended logging for scripting and imporved tractography methods.

Full rebuild of 750 documentation pages.

FasculationTools

Added functions for Fasculation analysis of muscle DTI data

Update of documentation.

dixon and registration fixes

bugfixes and cleanup of registration functions.
masking optimization
restructure of internal toolboox demo data and files
denoise updates
dixon updates