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Hi I am trying to run, the below but getting the error, please help
% pyinseq -i GTAC-134320-RG_1.HL2C3DSX5_CCGCGGTTAT-ACAGCGCTAG_L002_R1.fastq -s bla.txt -g PROKKA_09032022.gbk -e BLA
2023-03-01 18:05 - INFO - pyinseq - Process command line arguments
2023-03-01 18:05 - INFO - utils - Writing configuration file from provided arguments
2023-03-01 18:05 - INFO - utils - Directory BLA already exists. Snakemake will create files that are missing.
2023-03-01 18:05 - INFO - pyinseq - Workflow selected: pyinseq
2023-03-01 18:05 - INFO - pyinseq - ***** BEGIN PYINSEQ WORKFLOW *****
ModuleNotFoundError in file /Users/naseersangwan/Desktop/Conda/envs/pyinseq-py37/lib/python3.7/site-packages/pyinseq/workflows/PyinseqWorkflow/Snakefile, line 18:
No module named 'importlib.metadata'
File "/Users/naseersangwan/Desktop/Conda/envs/pyinseq-py37/lib/python3.7/site-packages/pyinseq/workflows/PyinseqWorkflow/Snakefile", line 18, in
File "/Users/naseersangwan/Desktop/Conda/envs/pyinseq-py37/lib/python3.7/site-packages/pyinseq/demultiplex.py", line 12, in
File "/Users/naseersangwan/Desktop/Conda/envs/pyinseq-py37/lib/python3.7/site-packages/screed/init.py", line 39, in
The text was updated successfully, but these errors were encountered:
Hi I am trying to run, the below but getting the error, please help
% pyinseq -i GTAC-134320-RG_1.HL2C3DSX5_CCGCGGTTAT-ACAGCGCTAG_L002_R1.fastq -s bla.txt -g PROKKA_09032022.gbk -e BLA
2023-03-01 18:05 - INFO - pyinseq - Process command line arguments
2023-03-01 18:05 - INFO - utils - Writing configuration file from provided arguments
2023-03-01 18:05 - INFO - utils - Directory BLA already exists. Snakemake will create files that are missing.
2023-03-01 18:05 - INFO - pyinseq - Workflow selected: pyinseq
2023-03-01 18:05 - INFO - pyinseq - ***** BEGIN PYINSEQ WORKFLOW *****
ModuleNotFoundError in file /Users/naseersangwan/Desktop/Conda/envs/pyinseq-py37/lib/python3.7/site-packages/pyinseq/workflows/PyinseqWorkflow/Snakefile, line 18:
No module named 'importlib.metadata'
File "/Users/naseersangwan/Desktop/Conda/envs/pyinseq-py37/lib/python3.7/site-packages/pyinseq/workflows/PyinseqWorkflow/Snakefile", line 18, in
File "/Users/naseersangwan/Desktop/Conda/envs/pyinseq-py37/lib/python3.7/site-packages/pyinseq/demultiplex.py", line 12, in
File "/Users/naseersangwan/Desktop/Conda/envs/pyinseq-py37/lib/python3.7/site-packages/screed/init.py", line 39, in
The text was updated successfully, but these errors were encountered: