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updated example output
Updates to clarify question in https://github.com/ncbi/amr/issues/156
Changes for release 2024-10-22.1
More documentation changes for version 4.0
Staging a partial update for version 4.0
Clarify -n option needs genomic sequence, not CDS
Clarified assembled in another place.
New point mutation organisms with release 2024-07-22.1
Updated Running AMRFinderPlus (markdown)
Add --annotation_format prodigal
Attempt to fix table formatting issue
Added Pseudomonas point mutations
Typo fix
Changes for release 2023-11-15.1
Added anchor link for --print_node
Improvements to annotation_format standard
Better description of annotation_format standard
Clarify --print_node option text
Updates to fields Added Hierarchy node field and improved formatting
Added Enterobacter_asburiae to the list of --organism options
Link to Acinetobacter species complex
Updated info on running AMRFinderPlus v3.11.14
https://github.com/ncbi/amr/issues/121
Removed K. aerogenes from point mutation list
Added info on nucleotide FASTA ID restrictions
Added organism-specific stuff for 2023-04-17.1