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Installer error message when installing AxonSeg on OSX #51

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oumayb opened this issue Aug 16, 2018 · 9 comments
Open

Installer error message when installing AxonSeg on OSX #51

oumayb opened this issue Aug 16, 2018 · 9 comments

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@oumayb
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oumayb commented Aug 16, 2018

After downloading the Mac version of AxonSeg, I tried installing it and obtained the following errors.
screen shot 2018-08-16 at 1 02 19 pm
screen shot 2018-08-16 at 1 02 30 pm

@mathieuboudreau
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@oumayb Where did you get this file to install? I've never installed ADS on my Mac this way.

@oumayb
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oumayb commented Aug 16, 2018

@mathieuboudreau
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@oumayb ah ha sorry! I thought this was posted in the AxonDeepSeg project, not AxonSeg. Nevermind!

@jcohenadad
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@alzaia do you have a clue?

@alzaia
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alzaia commented Aug 16, 2018

These installation files were mostly made for people who do not have some of the toolboxes we use in AxonSeg (Tanguy made them but I personally never tested). In your case you do not need to use the application version, you can simply clone the repo and use directly (https://github.com/neuropoly/axonseg#toolbox).

@oumayb
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oumayb commented Aug 16, 2018

Thanks @alzaia. @jcohenadad I don't have much experience using Matlab so it will probably take me more time to use it to get the ground truths.

@tanguyduval
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@oumayb sorry for that. This is due to a new security from Mac Os Sierra
apparently (
https://fr.mathworks.com/matlabcentral/answers/395906-why-does-my-deployed-executable-error-during-post-installation-tasks
).

In order to fix this (assuming AxonSeg_Mac.app is in your download
folder):
1- open a terminal
2- copy/paste the command sudo xattr -d com.apple.quarantine ~/Downloads/AxonSeg_Mac.app
3- enter your password
4- That's it! Double-click on the installer AxonSeg_Mac.app to run it

Best,
TD

@oumayb
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oumayb commented Aug 16, 2018

Amazing, it worked! Thanks @tanguyduval

@jcohenadad
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thanks @alzaia and @tanguyduval for the quick reply 👍

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