From 44865651bc0806a0852e1b588845abe7e10ff3fd Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Mon, 7 Oct 2024 11:27:40 +0000 Subject: [PATCH] Bump mamba-org/setup-micromamba from 1 to 2 Bumps [mamba-org/setup-micromamba](https://github.com/mamba-org/setup-micromamba) from 1 to 2. - [Release notes](https://github.com/mamba-org/setup-micromamba/releases) - [Commits](https://github.com/mamba-org/setup-micromamba/compare/v1...v2) --- updated-dependencies: - dependency-name: mamba-org/setup-micromamba dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] --- .github/workflows/ci.yaml | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/.github/workflows/ci.yaml b/.github/workflows/ci.yaml index 11738c849..012f104cf 100644 --- a/.github/workflows/ci.yaml +++ b/.github/workflows/ci.yaml @@ -67,7 +67,7 @@ jobs: # available on PyPI allows us to test against dependencies installed by pip, # which may have slightly different versions compared to Conda counterparts. - name: Install dependencies from Conda - uses: mamba-org/setup-micromamba@v1 + uses: mamba-org/setup-micromamba@v2 with: create-args: mafft raxml fasttree iqtree vcftools sqlite tsv-utils biopython=${{ matrix.biopython-version }} python=${{ matrix.python-version }} condarc: | @@ -127,7 +127,7 @@ jobs: # Set up a Conda environment that replicates Nextstrain's Conda runtime. - name: Install nextstrain-base from Conda - uses: mamba-org/setup-micromamba@v1 + uses: mamba-org/setup-micromamba@v2 with: create-args: nextstrain-base condarc: | @@ -263,7 +263,7 @@ jobs: # Set up a Conda environment that replicates Nextstrain's Conda runtime. - name: Install nextstrain-base from Conda - uses: mamba-org/setup-micromamba@v1 + uses: mamba-org/setup-micromamba@v2 with: create-args: nextstrain-base condarc: |