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Currently, only the BSJs are detected and quantified, without knowing the exact sequences. There are several tools which can obtain the full length circRNA sequence from paired-end data listed below. Unfortunately, none of these tools can process single-end data.
We should then create a parameter for switching between BSJ level and Isoform level discovery.
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Description of feature
Currently, only the BSJs are detected and quantified, without knowing the exact sequences. There are several tools which can obtain the full length circRNA sequence from paired-end data listed below. Unfortunately, none of these tools can process single-end data.
We should then create a parameter for switching between BSJ level and Isoform level discovery.
Tasks
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