publications.bib

#
# Post-doctoral publications
#

@book{scopatz2015comphys,
  title={Effective Computation in Physics: Field Guide to Research with Python},
  author={{\bf Anthony Scopatz} and Kathryn Huff},
  year={2015},
  publisher={O'Reilly Media, Inc.},
  note={(In tech review)}
}

@misc{scopatz2014pyneprog,
author = "{\bf Anthony Scopatz} and Cameron R. Bates and Elliott Biondo and Kathryn Huff and Kalin Kiesling and Robert Carlsen and Andrew Davis and Matthew Gidden and Tim Haines and Joshua Howland and Blake Huff and Kevin Manalo and  Arrielle Opotowsky and Rachel Slaybaugh and Eric Relson and Paul Romano and Patrick Shriwise and John D. Xia and Paul Wilson and Julie Zachman",
title = "{PyNE Progress Report}",
year = "2014",
month = "11",
url = "http://dx.doi.org/10.6084/m9.figshare.1250143"
}

@inproceedings{biondo2014quality,
author = {Elliott Biondo and {\bf Anthony Scopatz} and Matthew Gidden and 
    Rachel Slaybaugh and Cameron Bates and Paul P.H. Wilson},
address = {Anaheim, CA, USA},
booktitle = {Am. Nuc. Soc. Winter Meeting 2014},
month = Nov,
title = {{Quality Assurance within the PyNE Open Source Toolkit}},
year = {2014}
}

@inproceedings{bates2014pyne,
author = {Cameron R. Bates and Elliott Biondo and  Kathryn Huff and  Kalin Kiesling 
    and {\bf Anthony Scopatz} and Robert Carlsen and Andrew Davis and 
    Matthew Gidden and  Tim Haines and Joshua Howland  and Blake Huff and  Kevin Manalo 
    Arielle Opotowsky and Rachel Slaybaugh and  Eric Relson and Paul Romano and 
    Patrick Shriwise and John D. Xia and Paul Wilson and Julie Zachman},
address = {Anaheim, CA, USA},
booktitle = {Am. Nuc. Soc. Winter Meeting 2014},
month = Nov,
title = {{PyNE Progress Report}},
year = {2014}
}

@article{meinecke2014turbulent,
  title={Turbulent amplification of magnetic fields in laboratory laser-produced shock waves},
  author={Meinecke, J and Doyle, HW and Miniati, F and Bell, AR and Bingham, R and Crowston, R and Drake, RP and Fatenejad, M and Koenig, M and Kuramitsu, Y and others
    CC Kuranz and DQ Lamb and D Lee and MJ MacDonald and CD Murphy and HS Park and 
    A Pelka and A Ravasio and Y Sakawa and AA Schekochihin and {\bf A Scopatz} and
    P Tzeferacos and WC Wan and NC Woolsey and R Yurchak and B Reville and G Gregori},
  journal={Nature Physics},
  year={2014},
  publisher={Nature Publishing Group}
}

@article{tzeferacos2014numerical,
  title={Numerical modeling of laser-driven experiments of colliding jets: Turbulent amplification of seed magnetic fields},
  author={Tzeferacos, Petros and Fatenejad, Milad and Flocke, Norbert and Graziani, Carlo and Gregori, Gianluca and Lamb, Donald and Lee, Dongwook and Meinecke, Jena and {\bf Scopatz}, {\bf Anthony} and Weide, Klaus},
  journal={Bulletin of the American Physical Society},
  volume={59},
  year={2014},
  publisher={American Physical Society}
}

@article{tzeferacos2014,
  title={FLASH MHD simulations of experiments that study shock-generated magnetic fields},
  author={Tzeferacos, Petros and Fatenejad, Milad and Flocke, Norbert and Graziani, Carlo and Lamb, Donald Q and Lee, Dongwook and Meinecke, Jenna and {\bf Scopatz}, {\bf Anthony} and Weide, Klaus},
  journal={High Energy Density Physics},
  year=2015,
  note={(Accepted for Publication)}
}

@inproceedings{Gidden2014,
author={Gidden, Matthew and R. Carlsen and A. Opotowsky and O. Rakhimov and {\bf A. Scopatz} and P. Wilson},
address = {Kyoto, Japan},
booktitle = {Physor 2014},
month = Sept,
title = {{Agent-Based Dynamic Resource Exchange in Cyclus}},
year = {2014}
}

@misc{scopatz2014kitware,
author = "Anthony Scopatz",
title = "{XDress - Idiomatic, Automatic Wrapper Generation}",
year = "2014",
month = "8",
url = "http://dx.doi.org/10.6084/m9.figshare.1250140"
}

@article{aizawa2013under,
  title={Under-Sodium Endurance Experiment of Selector Valve in Failed-Fuel Detection and Location System of JSFR},
  author={Aizawa, Kosuke and Fujita, Kaoru and Hirata, Shingo and Kasahara, Naoto and Stempien, John D and Carpenter, David M and Kohse, Gordon and Kazimi, Mujid S and Morreale, AC and Ball, MR and others},
  journal={Nuclear Technology},
  volume={183},
  number={1},
  pages={1--12},
  year={2013},
  publisher={American Nuclear Society, Inc., 555 N. Kensington Ave. La Grange Park IL 60525 United States}
}

@inproceedings{Scopatz2013l,
author = {{\bf Anthony Scopatz} and Elliott D. Biondo and Carsten Brachem and 
          John Xia and Paul P. H. Wilson},
address = {Washington D.C., CA, USA},
booktitle = {Am. Nuc. Soc. Winter Meeting 2013},
month = Nov,
title = {{PyNE Progress Report}},
year = {2013}
}

@inproceedings{Scopatz2013k,
author = {{\bf Anthony Scopatz} and Elliott D. Biondo and Carsten Brachem and 
          John Xia and Paul P. H. Wilson},
address = {Washington D.C., CA, USA},
booktitle = {Presented to Am. Nuc. Soc. Winter Meeting 2013},
month = Nov,
title = {{PyNE Progress Report}},
keywords = {Presentation},
year = {2013}
}

@article{scopatz2013entropy,
  title={Entropy-Based Nuclear Fuel Cycle Sensitivities and Covariances},
  author={{\bf Scopatz}, {\bf Anthony M} and Schneider, Erich A and Li, Jun and Yim, Man-Sung},
  journal={Nuclear Technology},
  volume={183},
  number={1},
  pages={45--61},
  year={2013},
  publisher={American Nuclear Society, Inc., 555 N. Kensington Ave. La Grange Park IL 60525 United States}
}

@article{lamb2013validation,
  title={Validation and Predictive Radiation-Hydrodynamic Simulations with FLASH: Shock-Generated Magnetic Field Experiments Using the Vulcan Laser Facility at RAL},
  author={Lamb, DQ and {\bf Scopatz}, {\bf A} and Tzeferacos, P and Daley, C and Fatenejad, M and Flocke, N and Graziani, C and Lee, D and Weide, K and Doyle, H and others},
  journal={Bulletin of the American Physical Society},
  volume={58},
  year={2013},
  publisher={American Physical Society}
}

@article{tzeferacos2013predictive,
  title={Predictive radiation-MHD simulations with FLASH: Magnetic field generation and turbulent amplification experiments with the Omega EP laser},
  author={Tzeferacos, Petros and Daley, Christopher and Fatenejad, Milad and Flocke, Norbert and Graziani, Carlo and Lamb, Donald Q and Lee, Dongwook and {\bf Scopatz}, {\bf Anthony} and Weide, Klaus and Doyle, Hugo and others},
  journal={Bulletin of the American Physical Society},
  volume={58},
  year={2013},
  publisher={American Physical Society}
}

@inproceedings{Scopatz2013i,
address = {Salt Lake City, UT, USA},
author = {{\bf Anthony Scopatz}},
booktitle = {GLOBAL 2013},
month = oct,
title = {{A Dynamic, Dependent Type System for Nuclear Fuel Cycle Code Generation}},
year = {2013}
}

@inproceedings{Scopatz2013j,
address = {Salt Lake City, UT, USA},
author = {{\bf Anthony Scopatz}},
booktitle = {Presented to GLOBAL 2013},
keywords = {Presentation},
month = oct,
title = {{A Dynamic, Dependent Type System for Nuclear Fuel Cycle Code Generation}},
year = {2013}
}

@inproceedings{Gidden2013a,
address = {Atlanta, GA, USA},
author = {Matthew Gidden and {\bf Anthony Scopatz} and Paul Wilson},
booktitle = {American Nuclear Society Annual Meeting 2013},
month = jun,
title = {{Developing Standardized, Open Benchmarks and a Corresponding 
          Specification Language for the Simulation of Dynamic Fuel Cycles}},
year = {2013}
}

@inproceedings{Scopatz2013h,
author = {\bf{Anthony Scopatz}},
address = {Austin, TX, USA},
organization = {Presented to SciPy 2013},
keywords = {Presentation},
month = Jun,
title = {{XDress: Type but Verify}},
year = {2013}
}

@inproceedings{Scopatz2013g,
author = {\bf{Anthony Scopatz}},
address = {Chicago, IL, USA},
organization = {Presented to The University of Chicago Software Carpentry Bootcamp},
keywords = {Presentation},
month = Jan,
title = {{Documentation}},
year = {2013}
}

@inproceedings{Scopatz2013f,
author = {{\bf Anthony Scopatz}},
address = {{Sun Valley, ID, USA}},
booktitle = {{Presented to International Conference on Mathematics and Computational 
              Methods Applied to Nuclear Science \& Engineering (M\&C 2013)}},
title = {{First \& second order approximations to stage numbers in
          multicomponent enrichment cascades}},
month = May,
year = {2013}
}

@inproceedings{Scopatz2013e,
address = {Rochester, NY, USA},
author = {{\bf Anthony Scopatz} and Milad Fatenejad and 
          Norbert Flocke and Gianluca Gregori and Don Lamb and Dongwook Lee and 
          Jena Meinecke and Petros Tzeferacos and Klaus Weide},
booktitle = {Omega Laser User's Group Meeting 2013},
keywords = {Poster1},
month = Feb,
title = {{FLASH Hydrodynamic Simulations of Potential Experiment Design at NIF 
          and Omega to Explore High Magnetic Reynolds Number Regimes}},
year = {2013}
}

@inproceedings{Scopatz2013d,
address = {Santa Clara, CA, USA},
author = {\bf{Anthony Scopatz}},
organization = {Presented to PyData Silicon Valley 2013},
keywords = {Tutorial},
month = Mar,
title = {{HDF5 is for Lovers}},
year = {2013}
}

@inproceedings{Scopatz2013c,
author = {{\bf Anthony Scopatz}},
address = {Madison, WI, USA},
booktitle = {Presented to Nuclear Engineering Colloqium},
month = Feb,
title = {{Not Your Physicists' Entropy: Information Theory Applications to the Nuclear Fuel Cycle}},
url = {https://s3.amazonaws.com/isoneph/fc-entropy-talk/fc-entropy-talk_slides.html},
year = {2013}
}

@inproceedings{Scopatz2013b,
address = {Livermore, CA, USA},
author = {{\bf Anthony Scopatz} and Milad Fatenejad and 
          Norbert Flocke and Gianluca Gregori and Don Lamb and Dongwook Lee and 
          Jena Meinecke and Petros Tzeferacos and Klaus Weide},
booktitle = {NIF User's Group Meeting 2013},
keywords = {Poster1},
month = Feb,
title = {{FLASH Hydrodynamic Simulations of Potential Experiment Design at NIF to 
          Explore the Generation of Cosmological Magnetic Fields}},
year = {2013}
}

@inproceedings{Tzeferacos2013a,
address = {Livermore, CA, USA},
author = {Petros Tzeferacos and Milad Fatenejad and 
          Norbert Flocke and Gianluca Gregori and Don Lamb and Dongwook Lee and 
          Jena Meinecke and {\bf Anthony Scopatz} and Klaus Weide},
booktitle = {NIF User's Group Meeting 2013},
keywords = {Poster1},
month = Feb,
title = {{MHD Simulations of Cosmological Magnetic Field Generation with the
          FLASH Code}},
year = {2013}
}


@inproceedings{Scopatz2013a,
author = {{\bf Anthony Scopatz}},
address = {{Sun Valley, ID, USA}},
booktitle = {{International Conference on Mathematics and Computational Methods 
              Applied to Nuclear Science \& Engineering (M\&C 2013)}},
title = {{First \& second order approximations to stage numbers in
          multicomponent enrichment cascades}},
month = May,
year = {2013}
}

@inproceedings{Scopatz2012t,
author = {{\bf Anthony Scopatz} and Paul K. Romano and Paul P.H. Wilson and 
          Kathryn D. Huff},
address = {San Diego, CA, USA},
booktitle = {Presented to Am. Nuc. Soc. Winter Meeting 2012},
month = Nov,
title = {{PyNE: Nuclear Engineering Toolkit}},
year = {2012}
}

@inproceedings{Scopatz2012s,
address = {Toronto, ON, Canada},
author = {\bf{Anthony Scopatz}},
organization = {Presented to PyCon Canada 2012},
keywords = {Tutorial},
month = Nov,
title = {{HDF5 is for Lovers}},
year = {2012}
}

@inproceedings{Scopatz2012r,
author = {{\bf Anthony Scopatz} and Moo Le and Chris Camphouse and Jonathan March and 
          Warren Weckesser and Eric Jones},
address = {Phoenix, AZ, USA},
booktitle = {Waste Management 2012},
month = Feb,
title = {{A Dynamic Waste Isolation Pilot Plant Performance Assessment Tool}},
year = {2012}
}


@inproceedings{Scopatz2012q,
author = {\bf{Anthony Scopatz}},
address = {Austin, TX, USA},
booktitle = {SciPy 2012},
month = Jul,
title = {{Total Recall: flmake and the Quest for Reproducibility}},
year = {2012}
}


@inproceedings{Scopatz2012p,
author = {{\bf Anthony Scopatz} and Erich Schneider},
address = {Knoxville, TN, USA},
booktitle = {PHYSOR 2012},
month = Apr,
title = {{Interpolations of Nuclide-Specific Scattering Kernels Generated 
          with Serpent}},
year = {2012}
}

@inproceedings{Scopatz2011d,
author = {{\bf Anthony Scopatz} and Jun Li and Erich Schneider and Man-Sung Yim},
address = {Makuhari, Japan},
booktitle = {Global 2011},
month = Dec,
title = {{Fuel Cycle Covariance of Plutonium and Americium Separations to
          Repository Capacity using Information Theoretic Measures}},
year = {2011}
}

@article{scopatz2012pyne,
  title={PyNE: Python for Nuclear Engineering},
  author={{\bf Anthony M Scopatz} and Romano, Paul K and Wilson, Paul PH and Huff, Kathryn D},
  journal={Transactions of the American Nuclear Society},
  volume={107},
  pages={985},
  year={2012}
}

@article{fatenejad2013modeling,
  title={Modeling HEDLA magnetic field generation experiments on laser facilities},
author = {M. Fatenejad and A. R. Bell and A. Benuzzi-Mounaix and  R. Crowston and 
          R. P. Drake and N. Flocke and M. Koenig and C. Krauland and D. Lamb and 
          D. Lee and J. R. Marques and J. Meinecke and F. Miniati and C. D. Murphy and
          H.-S. Park and A. Pelka and A. Ravasio and B. Remington and B. Reville and 
          {\bf A. Scopatz} and P. Tzeferacos and  K. Weide and N. Woolsey and 
          R. Young and R. Yurchak},
  journal={High Energy Density Physics},
  volume={9},
  number={1},
  pages={172--177},
  year={2013},
  publisher={Elsevier}
}

@article{Tzeferacos2012b,
author = {Petros Tzeferacos and Milad Fatenejad and Norbert Flocke and 
          Gianluca Gregori and Don Lamb and Dongwook Lee and Jena Meinecke and 
          {\bf Anthony Scopatz} and Klaus Weide},
journal = {High Energy Density Physics},
title = {{Hydrodynamic Simulations FLASH magnetohydrodynamic simulations of laser-driven shock experiments}},
year = {2012}
}

@article{scopatz2013flash,
  title={FLASH hydrodynamic simulations of experiments to explore the generation of cosmological magnetic fields},
  author={{\bf Anthony Scopatz} and Fatenejad, Milad and Flocke, Norbert and Gregori, Gianluca and Koenig, M and Lamb, DQ and Lee, D and Meinecke, J and Ravasio, A and Tzeferacos, P and others},
  journal={High Energy Density Physics},
  volume={9},
  number={1},
  pages={75--81},
  year={2013},
  publisher={Elsevier}
}

@inproceedings{Scopatz2012m,
author = {\bf{Anthony Scopatz}},
address = {Knoxville, TN, USA},
organization = {Presented to The Hacker Within PHYSOR 2012 Workshop},
keywords = {Presentation},
month = Apr,
title = {{PyNE: Python for Nuclear Engineering}},
year = {2012}
}


@inproceedings{Scopatz2012l,
author = {\bf{Anthony Scopatz}},
address = {Rutherford, England, UK},
organization = {Presented to Rutherford Appleton Laboratory FLASH Workshop},
keywords = {Presentation},
month = Jun,
title = {{Visualizing FLASH with yt}},
year = {2012}
}


@inproceedings{Scopatz2012k,
author = {\bf{Anthony Scopatz}},
address = {Knoxville, TN, USA},
organization = {Presented to PHYSOR 2012},
keywords = {Presentation},
month = Apr,
title = {{Interpolations of Nuclide-Specific Scattering Kernels Generated with 
          Serpent}},
year = {2012}
}


@inproceedings{Scopatz2011c,
author = {\bf{Anthony Scopatz}},
address = {Makuhari, Japan},
organization = {Presented to GLOBAL 2011},
keywords = {Presentation},
month = Dec,
title = {{Fuel Cycle Covariance of Plutonium and Americium Separations to Repository 
          Capacity using Information Theoretic Measures}},
year = {2011}
}


@inproceedings{Scopatz2012j,
author = {\bf{Anthony Scopatz}},
address = {Chicago, IL, USA},
organization = {Presented to The University of Chicago Software Carpentry Bootcamp},
keywords = {Presentation},
month = Apr,
title = {{Documentation}},
year = {2012}
}


@inproceedings{Scopatz2012i,
author = {\bf{Anthony Scopatz}},
address = {Chicago, IL, USA},
organization = {Presented to The University of Chicago Software Carpentry Bootcamp},
keywords = {Presentation},
month = Apr,
title = {{Testing}},
year = {2012}
}


@inproceedings{Scopatz2012h,
author = {\bf{Anthony Scopatz}},
address = {Chicago, IL, USA},
organization = {Presented to The University of Chicago Software Carpentry Bootcamp},
keywords = {Presentation},
month = Apr,
title = {{Debugging}},
year = {2012}
}


@inproceedings{Scopatz2012g,
address = {Austin, TX, USA},
author = {\bf{Anthony Scopatz}},
organization = {Presented to SciPy 2012},
keywords = {Tutorial},
month = Jul,
title = {{HDF5 is for Lovers}},
year = {2012}
}


@inproceedings{Scopatz2012f,
address = {Austin, TX, USA},
author = {\bf{Anthony Scopatz}},
organization = {Presented to SciPy 2012},
keywords = {Presentation},
month = Jul,
title = {{Total Recall: flmake and the Quest for Reproducibility}},
url = {http://www.youtube.com/watch?v=ce4UU0ltbPA},
year = {2012}
}


@inproceedings{Scopatz2012e,
address = {Snowbird, UT},
author = {\bf{Anthony Scopatz}},
organization = {Presented to CScADS 2012 -- Scientific Data and Analytics for 
                Extreme-scale Computing [Invited]},
keywords = {Presentation},
month = Jul,
title = {{FLASH, HEDP, and Future Needs}},
year = {2012}
}


@inproceedings{Scopatz2012d,
address = {Chicago, IL, USA},
author = {\bf{Anthony Scopatz}},
organization = {Presented to Am. Nuc. Soc. Annual Meeting 2012 [Invited]},
month = Jun,
title = {{Open, Free, or Me: the Binary in the Coalmine -- Experiences with the 
          Legalities of Software Development and Distribution Panel}},
year = {2012}
}


@inproceedings{Scopatz2012c,
address = {Providence, RI, USA},
author = {{\bf Anthony Scopatz} and Milad Fatenejad and Norbert Flocke and 
          Gianluca Gregori Don Lamb and Dongwook Lee and Jena Meinecke and 
          Petros Tzeferacos and Klaus Weide},
booktitle = {APS Div. of Plasma Phys. 2012},
keywords = {Poster1},
month = Oct,
title = {{FLASH Hydrodynamic Simulations of Experiments to Explore the Generation 
          of Cosmological Magnetic Fields}},
year = {2012}
}


@inproceedings{Flocke2012a,
address = {Providence, RI, USA},
author = {Norbert Flocke and John Bachan and Sean Couch and Chris Daley and
          Anshu Dubey and Milad Fatenejad and Carlo Graziani and  Don Lamb and 
          Dongwook Lee and {\bf Anthony Scopatz} and Petros Tzeferacos and Klaus Weide},
booktitle = {APS Div. of Plasma Phys. 2012},
keywords = {Poster1},
month = Oct,
title = {{Improvements to the FLASH Laser Energy Deposition Package}},
year = {2012}
}


@article{scopatz2011essential,
  title={Essential physics for fuel cycle modeling},
  author={Scopatz, Anthony Michael},
  year={2011}
}

@inproceedings{Fatenejad2012a,
address = {Providence, RI, USA},
author = {Milad Fatenejad and John Bachan and Sean Couch and Chris Daley and
          Anshu Dubey and Norbert Flocke and Carlo Graziani and  Don Lamb and 
          Dongwook Lee and {\bf Anthony Scopatz} and Petros Tzeferacos and Klaus Weide},
booktitle = {APS Div. of Plasma Phys. 2012},
keywords = {Poster1},
month = Oct,
title = {{Improvements to the FLASH code for Simulating HEDP Experiments}},
year = {2012}
}

@inproceedings{meinecke2012platform,
  title={A platform to study magnetic field amplification of laser driven shocks due to induced turbulence},
  author={Meinecke, Jena and Doyle, Hugo and Bell, AR and Crowston, Robert and Drake, Paul and Fatenejad, M and Hartley, Nick and Koenig, Michel and Kuramitsu, Y and Kuranz, Carolyn and others},
  booktitle={APS Meeting Abstracts},
  volume={1},
  pages={8046P},
  year={2012}
}



@inproceedings{Scopatz2012b,
address = {Tallahassee, FL, USA},
author = {{\bf Anthony Scopatz} and Milad Fatenejad and Norbert Flocke and 
          Gianluca Gregori and Michel Koenig and Don Lamb and Dongwook Lee and 
          Jena Meinecke and Alessandra Ravasio and Petros Tzeferacos and 
          Klaus Weide and Roman Yurchak},
booktitle = {HELDA 2012},
keywords = {Poster1},
month = apr,
title = {{FLASH Hydrodynamic Simulations of Experiments to Explore the Generation 
          of Cosmological Magnetic Fields}},
year = {2012}
}


@inproceedings{Tzeferacos2012a,
address = {Tallahassee, FL, USA},
author = {Petros Tzeferacos and Milad Fatenejad and Norbert Flocke and 
          Gianluca Gregori and Don Lamb and Dongwook Lee and Jena Meinecke and 
          {\bf Anthony Scopatz} and Klaus Weide},
booktitle = {HELDA 2012},
keywords = {Poster1},
month = apr,
title = {{FLASH magnetohydrodynamic simulations exploring 
          the amplification by turbulence of magnetic fields}},
year = {2012}
}


@inproceedings{Scopatz2012a,
address = {Austin, TX, USA},
author = {{\bf Anthony Scopatz} and Paul Romano and Paul Wilson and Rachel Slaybaugh 
          and Katy Huff and Eric Relson},
booktitle = {SciPy 2012},
keywords = {Poster1},
month = jul,
title = {{PyNE: Python for Nuclear Engineering}},
year = {2012}
}

#
# Graduate Publication
#

@inproceedings{Scopatz2010l,
address = {Ann Arbor, MI, USA},
author = {{\bf Anthony Scopatz} and Jun Li and Man-Sung Yim and Erich Schneider},
organization = {Presented to Am. Nuc. Soc. Student Conference 2010},
title = {{Elementary Fuel Cycle Parameter Contingency Analysis Motivation}},
year = {2010}
}



@inproceedings{Scopatz2011b,
address = {Austin, TX, USA},
author = {\bf{Anthony Scopatz}},
organization = {Presented to SciPy 2011},
month = jul,
title = {{SciPy Tutorial}},
year = {2011}
}


@article{huff2011rapid,
  title={Rapid peer education of a computational nuclear engineering skill suite},
  author={Huff, Kathryn D and Scopatz, Anthony M and Preston, Nicholas D and Wilson, Paul PH},
  journal={Transactions of the American Nuclear Society},
  volume={104},
  pages={103},
  year={2011}
}

@inproceedings{Scopatz2010k,
address = {Gaithersburg, MD, USA},
author = {{\bf Anthony Scopatz} and Jun Li and Erich Schneider and Man-Sung Yim and 
          Brian Parks},
booktitle = {Fuel Cycle Research \& Development 2010},
keywords = {Poster1},
mendeley-tags = {Poster1},
month = oct,
title = {{The Impact of Reprocessing Separation Efficiency on Repository Capacity 
         and Performance - FCR\&D 2010}},
year = {2010}
}


@inproceedings{Miranda2011,
address = {Austin, TX, USA},
author = {Alfredo Miranda and {\bf Anthony Scopatz} and Erich Schneider},
booktitle = {UT Energy Forum},
keywords = {Poster},
mendeley-tags = {Poster},
month = feb,
title = {{Nuclear Fuel Cycle Simulation Framework}},
year = {2011}
}


@inproceedings{Scopatz2011a,
address = {Austin, TX, USA},
author = {\bf{Anthony Scopatz}},
organization = {Presented to SciPy 2011},
keywords = {Presentation},
month = jul,
title = {{atobrute: Why Plaintext Isn't So Vanilla}},
year = {2011}
}


@inproceedings{Scopatz2011,
author = {\bf{Anthony Scopatz}},
organization = {Presented to The Hacker Within Software Carpentry Bootcamp},
keywords = {Presentation},
month = jan,
title = {{Debugging}},
year = {2011}
}


@inproceedings{Preston2011,
address = {Madison, WI, USA},
author = {Nicholas Preston and {\bf Anthony Scopatz}},
organization = {Presented to The Hacker Within Software Carpentry Bootcamp},
keywords = {Presentation},
month = jan,
title = {{Databases}},
year = {2011}
}


@inproceedings{Harrison2007a,
address = {Boise, Idaho, USA},
author = {Rick Harrison and {\bf Anthony Scopatz} and Molly Ernesti},
booktitle = {Presented to GLOBAL 2007},
keywords = {Presentation},
month = sep,
title = {{A Review of Nuclear Fuel Cycle Options for Developing Nations}},
year = {2007}
}


@misc{Schneider2009,
address = {Austin, TX, USA},
author = {Erich Schneider and {\bf Anthony Scopatz} and Brian Parks},
institution = {Physics Department, The University of Texas at Austin},
month = sep,
title = {{The Impact of Reprocessing Separation Efficiency on Repository Capacity 
         and Performance}},
year = {2009}
}


@inproceedings{Scopatz2010j,
address = {Department of Mechanical Engineering - The University of Texas at Austin, 
           Austin, TX},
author = {{\bf Anthony Scopatz} and Jun Li and Man-Sung Yim and Erich Schneider},
booktitle = {Presented to Thermal Fluid Systems - Nuclear \& Radiation Engineering 
             Seminar Series},
keywords = {Presentation},
month = mar,
title = {{The Sensitivity of Fuel Cycle Performance to Separation Efficiency}},
year = {2010}
}


@inproceedings{Li2009c,
address = {Charleston, South Carolina, USA},
author = {Jun Li and {\bf Anthony Scopatz} and Man-sung Yim and Erich Schneider},
booktitle = {Integrated Radioactive Waste Management in Future Fuel Cycles 2009},
keywords = {Poster},
month = nov,
title = {{The Impact of Reprocessing Separation Efficiency on Repository Capacity 
         and Performance}},
year = {2009}
}


@inproceedings{Scopatz2009d,
address = {Paris, France},
author = {{\bf Anthony Scopatz} and Jun Li and Man-Sung Yim and Erich Schneider},
organization = {Presented to GLOBAL 2009},
keywords = {Presentation},
month = sep,
title = {{A Systemic Evaluation of the Sensitivity of Fuel Cycle Performance Metrics 
          to Separation Efficiency Variation}},
year = {2009}
}


@inproceedings{Scopatz2009g,
address = {Gainesville, FL, USA},
author = {\bf{Anthony Scopatz}},
booktitle = {Am. Nuc. Soc. Student Conference 2009},
month = Apr,
title = {{Impact of Separation Efficiencies on Repository Peak Temperature Time}},
year = {2009}
}


@inproceedings{Scopatz2009f,
address = {Gainesville, FL, USA},
author = {\bf{Anthony Scopatz}},
organization = {Presented to  Am. Nuc. Soc. Student Conference 2009},
keywords = {Presentation},
month = Apr,
title = {{Impact of Separation Efficiencies on Repository Peak Temperature Time}},
year = {2009}
}


@inproceedings{Schneider2008,
address = {Interlaken, Switzerland},
author = {Erich Schneider and \bf{Anthony Scopatz}},
booktitle = {PHYSOR 2008},
title = {{A Parameterization of the Neutronic Characteristics of Recyclable Uranium}},
year = {2008}
}


@inproceedings{Scopatz2008c,
address = {College Station, TX, USA},
author = {\bf{Anthony Scopatz}},
booktitle = {Am. Nuc. Soc. Student Conference 2008},
month = mar,
title = {{Effects of Neutronic Parameterization on Recyclable Uranium Fuel Cycles}},
year = {2008}
}

@misc{Scopatz2010h,
address = {Argonne National Laboratory, Chicago, IL},
author = {\bf{Anthony Scopatz}},
booktitle = {Program},
keywords = {Presentation},
institution = {Argonne National Laboratory},
month = jul,
title = {{Physics-Based Dynamic Nuclear Fuel Cycle Modeling \& Implications}},
year = {2010}
}


@inproceedings{Scopatz2010g,
address = {Austin, Texas},
author = {\bf{Anthony Scopatz}},
organization = {Presented to SciPy 2010},
keywords = {Presentation},
month = jun,
title = {{Do Google, Bing, \& Yahoo Differ? Contingency Table Analysis on Search Engines}},
year = {2010}
}


@inproceedings{Scopatz2010f,
address = {San Diego, CA, USA},
author = {{\bf Anthony Scopatz} and Li, Jun and Yim, Man-sung and Schneider, Erich},
organization = {Presented to Am. Nuc. Soc. Annual Meeting 2010},
keywords = {Presentation},
month = jun,
title = {{Nuclear Fuel Cycle Sensitivity \& Contingency Table Analysis}},
year = {2010}
}


@inproceedings{Scopatz2010a,
address = {Pittsburgh, PA, USA},
author = {{\bf Anthony Scopatz} and Li, Jun and Yim, Man-Sung and Schneider, Erich},
booktitle = {Presented to Physor 2010},
keywords = {Presentation},
month = may,
title = {{Nuclear Fuel Cycle Sensitivity to the Variation of Physical Parameters}},
year = {2010}
}

@inproceedings{Scopatz2010e,
address = {Madison, WI, USA},
author = {\bf{Anthony Scopatz}},
booktitle = {Presented to The Hacker Within Python Bootcamp},
title = {{Using SciPy}},
year = {2010}
}


@inproceedings{Scopatz2010d,
address = {Madison, WI, USA},
author = {\bf{Anthony Scopatz}},
booktitle = {Presented to The Hacker Within Python Bootcamp},
title = {{Advanced Python}},
year = {2010}
}


@inproceedings{Scopatz2010b,
address = {Pittsburgh, PA, USA},
author = {{\bf Anthony Scopatz} and Li, Jun and Yim, Man-sung and Schneider, Erich},
booktitle = {PHYSOR 2010},
keywords = {fuel cycle,sensitivity analysis},
title = {{Nuclear Fuel Cycle Sensitivity to the Variation of Physical Parameters}},
year = {2010}
}


@inproceedings{Scopatz2010i,
address = {Ann Arbor, MI, USA},
author = {{\bf Anthony Scopatz}},
booktitle = {American Nuclear Society Student Conference},
publisher = {American Nuclear Society},
title = {{Elementary Fuel Cycle Parameter Contingency Analysis}},
year = {2010}
}


@article{li2010sensitivity,
  title={The sensitivity of fuel cycle performance to separation efficiency},
  author={Li, Jun and Scopatz, Anthony and Yim, Man-Sung and Schneider, Erich},
  journal={Nuclear Engineering and Design},
  volume={240},
  number={3},
  pages={511--523},
  year={2010},
  publisher={Elsevier}
}

@article{Scopatz2010c,
  title={Methodology for Identifying Critical Fuel Cycle Parameters Governing Repository Capacity},
  author = {{\bf Anthony Scopatz} and Li, Jun and Yim, Man-Sung and Schneider, Erich},
  journal={Transactions of the American Nuclear Society},
  volume={102},
  pages={101--102},
  year={2010},
  publisher={American Nuclear Society}
}

@article{Scopatz2009,
author = {{\bf Anthony Scopatz} and Schneider, Erich},
doi = {10.1016/j.nucengdes.2009.02.022},
issn = {00295493},
journal = {Nuclear Engineering and Design},
month = oct,
number = {10},
pages = {2169--2184},
publisher = {Elsevier B.V.},
title = {{A new method for rapid computation of transient fuel cycle material 
        balances}},
volume = {239},
year = {2009}
}

@article{schneider2009attachment,
  title={Attachment E Uranium Resource Model (U of TX-Austin)},
  author={Schneider, Erich and {\bf Anthony Scopatz}},
  journal={Advanced Fuel Cycle Economic Tools, Algorithms, and Methodologies},
  year={2009}
}

@misc{Scopatz2009b,
address = {Austin, TX, USA},
author = {\bf{Anthony Scopatz}},
institution = {The University of Texas at Austin},
pages = {130},
title = {{A Newer Medium-Fidelity Method for Reactor and Fuel Cycle Simulation - A PhD Proposal}},
year = {2009}
}

@article{Scopatz2009e,
  title={A new method for rapid computation of transient fuel cycle material balances},
  author={{\bf Anthony M Scopatz} and Schneider, Erich A},
  journal={Nuclear Engineering and Design},
  volume={239},
  number={10},
  pages={2169--2184},
  year={2009},
  doi={10.1016/j.nucengdes.2009.02.022},
  publisher={Elsevier}
}

@misc{Scopatz2009a,
address = {Austin, TX, USA},
author = {{\bf Anthony Scopatz}},
booktitle = {Notes},
institution = {The University of Texas at Austin},
pages = {1--12},
title = {{Notes on Log-Uniform Distributions}},
year = {2009}
}

@inproceedings{Scopatz2009c,
address = {Paris, France},
author = {{\bf Anthony Scopatz} and Li, Jun and Yim, Man-sung and Schneider, Erich},
booktitle = {GLOBAL 2009},
title = {{A Systemic Evaluation of the Sensitivity of Fuel Cycle}},
year = {2009}
}

@article{Li2009b,
author = {Jun Li and {\bf Anthony Scopatz} and Man-Sung Yim and Erich Schneider},
doi = {10.1016/j.nucengdes.2009.02.004},
journal = {Nuclear Engineering and Design},
pages = {511--523},
title = {{The Sensitivity of Fuel Cycle Performance to Separation Efficiency}},
volume = {240},
year = {2009}
}

@misc{Scopatz2008a,
address = {Austin, TX, USA},
author = {\bf{Anthony Scopatz}},
institution = {The University of Texas at Austin},
pages = {8},
title = {{Perturbation Method for Determining Hitting Target Burnup When Mixing Mass Streams}},
year = {2008}
}

@misc{Scopatz2008a,
address = {Austin, TX, USA},
author = {\bf{Anthony Scopatz}},
institution = {The University of Texas at Austin},
pages = {8},
title = {{Perturbation Method for Determining Hitting Target Burnup When Mixing Mass Streams}},
year = {2008}
}


@article{li2008impact,
  title={Impact of reprocessing separation efficiency on fuel cycle cost and repository capacity},
  author={Li, J and {\bf A Scopatz} and Yim, MS and Schneider, E and McNelis, D},
  journal={Transactions of the American Nuclear Society},
  volume={99},
  pages={211--212},
  year={2008},
  publisher={American Nuclear Society}
}

@inproceedings{Scopatz2008b,
address = {College Station, TX, USA},
author = {\bf{Anthony Scopatz}},
organization = {Presented to ANS Student Conference 2008},
keywords = {Presentation},
month = mar,
title = {{Effects of Neutronic Parameterization on Recyclable Uranium Fuel Cycles}},
year = {2008}
}

@inproceedings{Schneider2007,
address = {Boise, Idaho, USA},
author = {Schneider, E. and {\bf Anthony Scopatz} and Deinert, M.},
booktitle = {GLOBAL 2007},
organization = {American Nuclear Society},
pages = {1549--1554},
title = {{Depleted and Recyclable Uranium in the United States: Inventories and Options}},
url = {http://www.osti.gov/energycitations/product.biblio.jsp?osti\_id=20979735},
year = {2007}
}

@mastersthesis{Scopatz2007a,
  title={Recyclable Uranium Options Under the Global Nuclear Energy Partnership},
  author={{\bf Anthony Michael Scopatz}},
  year={2007},
  month = dec,
  pages = {154},
  type = {Thesis},
  school={University of Texas at Austin}
}

@incollection{harrison2007review,
  title={A review of nuclear fuel cycle options for developing nations},
  author={Harrison, RK and {\bf Scopatz}, {\bf AM} and Ernesti, M},
  booktitle={Proceedings of GLOBAL 2007 conference on advanced nuclear fuel cycles and systems},
  year={2007}
}

#
# Undergrad Publications
#

@inproceedings{xu2004terahertz,
  title={Terahertz circular dichroism spectroscopy of biomolecules},
  author={Xu, Jing and Galan, Jhenny and Ramian, Gerald and Savvidis, Pavlos and Scopatz, Anthony and Birge, Robert R and Allen, S James and Plaxco, Kevin},
  booktitle={Optical Technologies for Industrial, Environmental, and Biological Sensing},
  pages={19--26},
  year={2004},
  organization={International Society for Optics and Photonics}
}

@inproceedings{prasankumar2005b,
  title={Carrier Dynamics in ErAs Nanoislands Measured by Optical-Pump THz-Probe Spectroscopy},
  author={Prasankumar, Rohit P and Scopatz, Anthony and Hilton, David J and Taylor, Antoinette J and Averitt, Richard D and Zide, Joshua M and Gossard, Arthur C},
  booktitle={Quantum Electronics and Laser Science Conference},
  pages={QWC3},
  year={2005},
  organization={Optical Society of America}
}

@inproceedings{xu2003biological,
  title={Biological Sensing with Terahertz Circular Dichroism Spectroscopy},
  author={Xu, J and Ramian, G and Scopatz, AM and Allen, SJ and Plaxco, KW},
  booktitle={APS Meeting Abstracts},
  volume={1},
  pages={35009},
  year={2003}
}

@inproceedings{xu2004terahertz,
  title={Terahertz Circular Dichroism Spectroscopy of Biopolymers},
  author={Xu, J and Ramian, G and Savvidis, P and Scopatz, AM and Allen, SJ and Galan, JF and Birge, RR and Plaxco, K},
  booktitle={APS Meeting Abstracts},
  volume={1},
  pages={14007},
  year={2004}
}

@article{xu2003terahertz,
  title={Terahertz circular dichroism spectroscopy: A potential approach to the in situ detection of life's metabolic and genetic machinery},
  author={Xu, Jing and Ramian, Gerald J and Galan, Jhenny F and Savvidis, Pavlos G and Scopatz, Anthony Michael and Birge, Robert R and Allen, S James and Plaxco, Kevin W},
  journal={Astrobiology},
  volume={3},
  number={3},
  pages={489--504},
  year={2003},
  publisher={Mary Ann Liebert, Inc.}
}

@article{Prasankumar2005a,
abstract = {We use optical-pump THz-probe spectroscopy to study carrier dynamics in self-assembled ErAs:GaAs nanoislands. Sub-picosecond carrier capture times are measured, indicating the potential of these devices as THz detectors comparable to low temperature grown GaAs.},
author = {Prasankumar, Rohit P. and {\bf Anthony Scopatz} and Hilton, David J. and Taylor, Antoinette J. and Averitt, Richard D.. and Zide, Joshua M.. and Gossard, Arthur C.},
keywords = {Ultrafast measurements,Ultrafast optics,Ultrafast spectroscopy},
month = may,
publisher = {Optical Society of America},
title = {{Carrier Dynamics in ErAs Nanoislands Measured by Optical-Pump THz-Probe Spectroscopy}},
url = {http://www.opticsinfobase.org.ezproxy.lib.utexas.edu/abstract.cfm?uri=QELS-2005-QWC3},
year = {2005}
}


@inproceedings{prasankumar2005carrier,
  title={Carrier Dynamics in Self-Assembled ErAs Nanoislands Measured by Optical Pump-THz Probe Spectroscopy},
  author={Prasankumar, Rohit P and Scopatz, Anthony and Hilton, David J and Taylor, Antoinette J and Averitt, Richard D and Zide, Joshua and Gossard, Arthur C},
  booktitle={Optical Terahertz Science and Technology},
  pages={TuB3},
  year={2005},
  organization={Optical Society of America}
}

@article{Xu2004,
author = {Xu, Jing and Galan, Jhenny and Ramian, Gerald J and Savvidis, Pavlos G and 
         {\bf Anthony Scopatz} and Birge, Robert R and Allen, S James and Plaxco, Kevin W},
doi = {10.1117/12.518533},
issn = {0277786X},
journal = {Proceedings of SPIE},
keywords = {chiral molecule,circular dichroism,collective vibrational modes,far-ir,proteins,sub-millimeter,terahertz},
number = {1},
pages = {19--26},
publisher = {Spie},
title = {{Terahertz circular dichroism spectroscopy of biomolecules}},
url = {http://link.aip.org/link/?PSI/5268/19/1\&Agg=doi},
volume = {5268},
year = {2004}
}


@article{Xu2003,
author = {Xu, Jing and Ramian, Gerald J and Galan, Jhenny F and Savvidis, Pavlos G 
         and {\bf Anthony Scopatz} and Birge, Robert R and Allen, S James and Plaxco, Kevin W},
journal = {Astrobiology},
number = {3},
title = {{Terahertz Circular Dichroism Spectroscopy: A Potential Approach to Impact of Reprocessing Separation Efficiency the In Situ Detection of Life’s Metabolic and Genetic Machinery}},
volume = {3},
year = {2003}
}


@article{Prasankumar2005,
author = {Prasankumar, R. P. and {\bf Anthony Scopatz} and Hilton, D. J. and Taylor, a. J. and Averitt, R. D. and Zide, J. M. and Gossard, a. C.},
doi = {10.1063/1.1923174},
issn = {00036951},
journal = {Applied Physics Letters},
number = {20},
pages = {201107},
title = {{Carrier dynamics in self-assembled ErAs nanoislands embedded in GaAs measured by optical-pump terahertz-probe spectroscopy}},
url = {http://link.aip.org/link/APPLAB/v86/i20/p201107/s1\&Agg=doi},
volume = {86},
year = {2005}
}