diff --git a/DESCRIPTION b/DESCRIPTION index e5a3881..4ac44d4 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,32 +1,47 @@ -Package: nimo Type: Package -Title: nimo: A Graphical User Interface-Based R Package for Species Distribution Modeling +Package: nimo +Title: Graphical User Interface for Species Distribution Modeling Version: 0.2.1 Date: 2023-10-05 -Depends: R (>= 3.5.0) -Imports: flexsdm, shiny, shinyFiles, shinydashboard, shinydashboardPlus, shinyjs, - plotly, leaflet, leaflet.extras, httr2, sf, terra, dismo, - DT, shinyWidgets, shinycssloaders, methods, dplyr, ggplot2 -Remotes: sjevelazco/flexsdm -Author: Stanislas Mahussi GANDAHO -Maintainer: Stanislas Mahussi GANDAHO +Authors@R: + person("Stanislas Mahussi", "Gandaho", email = "gandahostanmah@gmail.com", role = c("aut", "cre"), + comment = c(ORCID = "0009-0003-4969-1252")) +Description: An Application for flexibility to manipulate and parameterize + models according to unique research needs. It provides a user-friendly + graphical interface that enables users to define complete modeling + procedures, including variables, records, algorithms, ensemble + methods, and algorithm tuning. Additionally, 'nimo' seamlessly + integrates with the "Global Biodiversity Information Facility (GBIF)", + allowing users to easily query occurrence data for biodiversity + research and incorporate it into their modeling analyses. +License: GPL (>= 3) URL: https://github.com/stangandaho/nimo BugReports: https://github.com/stangandaho/nimo/issues -Description: The nimo (niche modeler) R package, based on flexsdm and powered by - Shiny, offers users the flexibility to manipulate and parameterize models - according to their unique research needs. It provides a user-friendly graphical - interface that enables users to define complete or partial modeling procedures, - including variables, records, algorithms, ensemble methods, and algorithm tuning. - Additionally, nimo seamlessly integrates with the Global Biodiversity Information - Facility (GBIF), allowing users to easily query occurrence data for biodiversity - research and incorporate it into their modeling analyses. This comprehensive - package empowers researchers to explore, customize, and model their data - effectively, with the added benefit of accessing real-world biodiversity - data through GBIF. -License: MIT + file LICENSE -Encoding: UTF-8 -RoxygenNote: 7.3.1 +Depends: + R (>= 3.5.0) +Imports: + dismo, + dplyr, + DT, + flexsdm, + ggplot2, + httr2, + leaflet, + leaflet.extras, + methods, + plotly, + sf, + shiny, + shinycssloaders, + shinydashboard, + shinydashboardPlus, + shinyFiles, + shinyjs, + shinyWidgets, + terra Suggests: testthat (>= 3.0.0) Config/testthat/edition: 3 +Encoding: UTF-8 Roxygen: list(markdown = TRUE) +RoxygenNote: 7.3.1 diff --git a/LICENSE b/LICENSE deleted file mode 100644 index 8d90800..0000000 --- a/LICENSE +++ /dev/null @@ -1,21 +0,0 @@ -MIT License - -Copyright (c) 2023 Stanislas Mahussi GANDAHO - -Permission is hereby granted, free of charge, to any person obtaining a copy -of this software and associated documentation files (the "Software"), to deal -in the Software without restriction, including without limitation the rights -to use, copy, modify, merge, publish, distribute, sublicense, and/or sell -copies of the Software, and to permit persons to whom the Software is -furnished to do so, subject to the following conditions: - -The above copyright notice and this permission notice shall be included in all -copies or substantial portions of the Software. - -THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR -IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, -FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE -AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER -LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, -OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE -SOFTWARE. diff --git a/README.md b/README.md index 44c03d6..d231773 100644 --- a/README.md +++ b/README.md @@ -1,6 +1,10 @@ - [![R-CMD-check](https://github.com/stangandaho/nimo/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/stangandaho/nimo/actions/workflows/R-CMD-check.yaml) - [![Code coverage](https://codecov.io/gh/stangandaho/nimo/graph/badge.svg?token=ehmZyEafyI)](https://codecov.io/gh/stangandaho/nimo) +[![License](https://img.shields.io/badge/license-GPL%20%28%3E=%203%29-lightgrey.svg?style=flat)](https://www.gnu.org/licenses/gpl-3.0.html#license-text) +[![R-CMD-check](https://github.com/stangandaho/nimo/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/stangandaho/nimo/actions/workflows/R-CMD-check.yaml) +[![Code coverage](https://codecov.io/gh/stangandaho/nimo/graph/badge.svg?token=ehmZyEafyI)](https://codecov.io/gh/stangandaho/nimo) [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.10495310.svg)](https://doi.org/10.5281/zenodo.10495310) +![GitHub Downloads (all assets, all releases)](https://img.shields.io/github/downloads/stangandaho/nimo/total?style=flat&logo=github&label=Downloads&labelColor=3C2308&color=042D0F) + + # **`{nimo}`** in brief