diss-style.sty

\NeedsTeXFormat{LaTeX2e}
\ProvidesPackage{diss-style}[2010/09/15 v1.0 PhD Dissertation Style]

%% Required packages
%%---------------------------------------------------------------------
\RequirePackage{float}
\RequirePackage{multirow}
\RequirePackage{amsmath}
\RequirePackage{amsfonts}
%\RequirePackage{amssymb}
\RequirePackage{ulem}
\RequirePackage[square,sort&compress,numbers]{natbib}
\RequirePackage[overload]{textcase}
\RequirePackage[FIGBOTCAP,tight,hang,raggedright]{subfigure}
\RequirePackage{fancyhdr}
\RequirePackage[chapter,plain]{algorithm}
\RequirePackage[load-configurations=binary]{siunitx}
\RequirePackage[orig]{isodate}
\RequirePackage[e]{esvect}
\RequirePackage{tikz}
% Note: ntheorem needs the amsmath option so that labels in equations
% work
\RequirePackage[thmmarks,hyperref,amsmath,noconfig]{ntheorem}
\RequirePackage{nicefrac}
\RequirePackage[notlof,notlot,chapter]{tocbibind}
\RequirePackage[titles,subfigure]{tocloft}
\RequirePackage{graphicx}
\RequirePackage{longtable}
\RequirePackage{algorithmic}
\RequirePackage{booktabs}
\RequirePackage{hyphenat}
\RequirePackage[retainmissing]{MnSymbol}
\RequirePackage{caption}
\RequirePackage{setspace}
\RequirePackage{refcount}
\RequirePackage{totpages}
%\RequirePackage{cite}
%\RequirePackage[pagecontinue=false,alphMult=0,AlphMulti=0,fnsymbolmult=false,romanMult=false,RomanMulti=false]{pagesLTS}
% Hyperref must be the last package, as it patches other packages 
% pdftitle, pdfauthor, pdfsubject and pdfkeywords are set in
% tkkdiss.cls
\RequirePackage[pdftex,final,breaklinks]{hyperref}


%% Language and hyphenations
%%---------------------------------------------------------------------
\selectlanguage{english}

\hyphenation{data-base}
\hyphenation{data-bases}
\hyphenation{time-stamp}
\hyphenation{time-stamps}
\hyphenation{time-stamped}
\hyphenation{time-stamping}


%% Layout definitions
%%---------------------------------------------------------------------

\setlength{\textwidth}{13.1cm}

% Text should be ~3.5cm from the border
\setlength{\oddsidemargin}{\paperwidth}
\addtolength{\oddsidemargin}{-\textwidth}
\addtolength{\oddsidemargin}{-.5\oddsidemargin}
\addtolength{\oddsidemargin}{-1in}

% Seems that this is not used
\setlength{\evensidemargin}{\oddsidemargin}

\setlength{\voffset}{-1cm}


% Table of contents
%\renewcommand{\cfttoctitlefont}{\LARGE\sffamily\bfseries}
%\renewcommand{\cftloftitlefont}{\LARGE\sffamily\bfseries}
%\renewcommand{\cftlottitlefont}{\LARGE\sffamily\bfseries}
\renewcommand{\cftchapfont}{\sffamily\large}
\setlength{\cftbeforechapskip}{2.5ex}
\renewcommand{\cftchapafterpnum}{\vspace{1ex}}

%\captionsetup[figure]{labelformat=simple,labelsep=quad,labelfont={bf},textfont={rm}}
%\captionsetup[algorithm]{labelfont={bf},textfont={rm}}
\captionsetup{labelsep=period,labelfont={bf,sf},textfont={rm}}

\floatname{algorithm}{Algorithm}

% Put floats (figures) closer to text
\setlength{\textfloatsep}{2ex}
%\setlength{\textfloatsep}{0.5\textfloatsep}

% Package subfigure with option tight puts the subfigure captions too
% near the sibfigures themselves. This adds more space.  
\setlength{\subfigcapskip}{0pt}
% Tighten the subfigure bottom spacing
\setlength{\subfigbottomskip}{0pt}

\setlength{\abovecaptionskip}{2ex}
\setlength{\belowcaptionskip}{0pt} 

% Normal line spacing
\linespread{1}

% Fancy headers
\pagestyle{fancy}
\setlength{\headheight}{14.5pt}
\renewcommand{\chaptermark}[1]{%
\markboth{\mbox{\upshape\sffamily\MakeUppercase{\chaptername~\thechapter\quad\;#1}}}%
{\mbox{\upshape\sffamily\MakeUppercase{\chaptername~\thechapter\quad\;#1}}}} 
\renewcommand{\sectionmark}[1]{%
\markright{\mbox{\upshape\sffamily\thesection\quad\;#1}}{}}

%\lhead{\fancyplain{}{\leftmark}}
%\rhead{\fancyplain{}{\textrm{\thepage}}}
%\cfoot{\fancyplain{\thepage{}}}

% These definitions are used for section start pages (leave the
% page header empty)
\fancypagestyle{plaintop}{
\fancyhf{} 
\fancyfoot[LE,RO]{\thepage}
}
% These definitions are used for the initial pages (preface, etc.)
% Same as above... 
\fancypagestyle{plain}{
\fancyhf{} 
\fancyfoot[LE,RO]{\thepage}
}
% Header definitions for normal pages
\fancypagestyle{dissertation}{
% Clear all definitions
\fancyhf{}
% Left-side on odd pages, right-side on right pages (current
% chapter/section name)
%\fancyhead[LE,RO]{\textsl{\leftmark}}
\fancyhead[LE]{\textsl{\leftmark}}
\fancyhead[RO]{\textsl{\rightmark}}
% Left-side on even pages, right-side on odd pages (page number)
\fancyfoot[LE,RO]{\thepage}
}

% Remove the ruler (horizontal line) from the header and footer
\renewcommand{\headrulewidth}{0pt}
\renewcommand{\footrulewidth}{0pt}


% Remove the space between paragraphs
\setlength{\parskip}{0pt}
% Indent the first lines of paragraphs (except directly after a
% heading)
\setlength{\parindent}{1.5em}



%% Two-side options
%%---------------------------------------------------------------------
\DeclareOption{distwoside}{
  % Text should be ~3.5cm from the border
  \setlength{\oddsidemargin}{3.5cm}
  \addtolength{\oddsidemargin}{-1in}
  \setlength{\evensidemargin}{\paperwidth}
  \addtolength{\evensidemargin}{-\textwidth}
  \addtolength{\evensidemargin}{-\oddsidemargin}
  \addtolength{\evensidemargin}{-2in}
  \setlength{\voffset}{-1cm}
}

\ProcessOptions



%% List of abbreviations & list of symbols
%%---------------------------------------------------------------------

% LoA and LoS use the \loxline macro to add description lines
% This uses the subsubsection style (which is not used elsewhere in the 
% disseration)
\newcommand{\loxline}[3]{\contentsline{subsubsection}{%
\numberline{\hyperref[#3]{#1}}{\hyperref[#3]{#2}}}{\pageref{#3}}{}}

% Make the LoF indentation zero to match the other contents lists
\setlength{\cftfigindent}{0pt}

\setlength{\cftsubsubsecindent}{0pt}
\setlength{\cftsubsubsecnumwidth}{2.8cm}
\setlength{\cftbeforesubsubsecskip}{0.6em}



%% Package configuration
%%---------------------------------------------------------------------

\newcommand{\pagecount}{\ref{TotPages}}
%\newcommand{\pagecount}{10}

% Hyperref setup
\hypersetup{plainpages=false}
\hypersetup{colorlinks=false}
\hypersetup{pdfborder={0 0 0}}
\hypersetup{pdfpagemode=UseOutlines}
\hypersetup{pdfdisplaydoctitle}
\hypersetup{bookmarksnumbered,bookmarksopen,bookmarksopenlevel=2}

% SI units setup
\sisetup{round-mode=places,table-auto-round=true}

% These fix the label problems in the algorithmic package with
% hyperref
%\makeatletter
%\def\theHALC@line{\thealgorithm-\theALC@line}
%\def\theHALC@rem{\thealgorithm-\theALC@rem-\theALC@line}
%\makeatother 

% \usetikzlibrary{shapes.multipart}
\usetikzlibrary{positioning}
\usetikzlibrary{calc}
\usetikzlibrary{arrows}
\usetikzlibrary{decorations.pathmorphing,decorations.markings}
\usetikzlibrary{shapes}
\usetikzlibrary{patterns}

\pgfdeclarepatternformonly{smobgpattern}{\pgfqpoint{-1pt}{-1pt}}{\pgfqpoint{8pt}{8pt}}{\pgfqpoint{7pt}{7pt}}
{
  \pgfsetlinewidth{0.2pt}
  \pgfpathmoveto{\pgfqpoint{0pt}{0pt}}
  \pgfpathlineto{\pgfqpoint{7.1pt}{7.1pt}}
  \pgfusepath{stroke}
}

\tikzstyle{opendeco}=[decoration={zigzag,amplitude=0.1em,segment length=0.6em}]
\tikzstyle{opendash}=[densely dotted,thick] 
\tikzstyle{bgpattern}=[pattern=smobgpattern,pattern color=black!100] 
\tikzstyle{node}=[circle,draw=black!100]
\tikzstyle{key}=[circle,draw=black!100]
\tikzstyle{lbl}=[font=\scriptsize,midway,sloped]
\tikzstyle{i}=[very thick]
\tikzstyle{page}=[rounded rectangle,draw=black!100,minimum width=2.3em,minimum height=2em]
\tikzstyle{db}=[cylinder,draw=black!100,shape border rotate=90,shape aspect=.25]
\tikzstyle{dbl}=[cylinder,draw=black!100,shape border rotate=90,shape aspect=.5]
\tikzstyle{rnode}=[rounded rectangle,minimum width=4em,minimum height=3.5em,font=\tiny]
\tikzstyle{parentlink}=[]
\tikzstyle{dead}=[fill=black!10]

\newcommand{\centerrows}[2]{\parbox[c]{#1}{\centering{}#2}}
\newcommand{\raggedrows}[2]{\parbox[c]{#1}{#2}}

% Tree page formatting
\newlength{\treepagewidth}
\setlength{\treepagewidth}{4.4em}
\newlength{\treeindexpagewidth}
\setlength{\treeindexpagewidth}{6.2em}
\newlength{\treepageline}
\setlength{\treepageline}{.8em}
\newlength{\treepageheight}
\setlength{\treepageheight}{3.5em}

\tikzstyle{treepage}=[rounded rectangle open top,draw=black!100,
font=\scriptsize,inner sep=3pt] 
\tikzstyle{treepageheader}=[rectangle,font=\footnotesize,inner sep=0pt,minimum width=1.4em]

\newcommand{\treepageheader}[2]{\node[treepageheader,above=-1pt of #1]
(#1header) {#2};} 
\newcommand{\treepagecontents}[3]{%
\setlength{\treepageheight}{#1\treepageline}%
\begin{minipage}[t][\treepageheight]{\treepagewidth}%
\raggedright%
#2\\
\vspace{-0.5em}
\rule{\treepagewidth}{0.5pt}
\vspace{-1.2em}\\
#3%
\end{minipage}%
}
\newcommand{\treeindexpagecontents}[3]{%
\setlength{\treepageheight}{#1\treepageline}%
\begin{minipage}[t][\treepageheight]{\treeindexpagewidth}
\raggedright%
#2\\
\vspace{-0.5em}
\rule{\treeindexpagewidth}{0.5pt}
\vspace{-1.2em}\\
#3%
\end{minipage}%
}

\newlength{\contentline}
\setlength{\contentline}{1.2em}
\newlength{\contentheight}
\setlength{\contentheight}{3\contentline}
\newcommand{\contentrows}[3]{%
\setlength{\contentheight}{#1\contentline}%
\begin{minipage}[t][\contentheight]{#2}%
\raggedright%
#3
\end{minipage}%
}


% Load TikZ UML Actor definition
\input{images/tikz-actor}
% Load TikZ rounded rectangle
\input{images/tikz-roundrect}
\input{images/tikz-roundrect-opentop}

\newlength{\txfigx}
\newlength{\txfigy}
\setlength{\txfigx}{2.3em}
\setlength{\txfigy}{1.6em}
%\newcommand{\txfigx}{2.3em}
%\newcommand{\txfigy}{1em}

\newlength{\tmvbtsmox}
\setlength{\tmvbtsmox}{2em}
\newlength{\tmvbtsmoy}
\setlength{\tmvbtsmoy}{1.2em}

\newlength{\visheight}
\setlength{\visheight}{48mm}

% Set comment for the algorithmic environment
\renewcommand{\algorithmiccomment}[1]{{\small/\!/~\textit{#1}}}
\algsetup{linenosize=\footnotesize}
\algsetup{linenodelimiter=\ }

% Add spacing to the footnote, after the footnote number
%\renewcommand{\thefootnote}{\arabic{footnote}\hspace{1ex}}
\renewcommand{\thefootnote}{\arabic{footnote}}

% Package ulem changes the \emph to underline words by default. 
% Don't want that.   
\normalem 

% Theorem environments
% For theoremsymbol to work, the label must not be the last command in the
% environment
\setlength{\theorempreskipamount}{0pt}
\setlength{\theorempostskipamount}{0pt}

\newcommand{\thmskip}{\addvspace{\medskipamount}}

% Settings for theorem environments (theorem, lemma, proof)
\theoremstyle{plain}
\theoremprework{}
\theorempostwork{}
\theoremheaderfont{\hspace{\parindent}\normalfont\sffamily\bfseries}
\theoremindent0pt
\theorembodyfont{\normalfont}
\theoremseparator{.}

\theoremprework{}
\theorempostwork{}
\newtheorem{theorem}{Theorem}[chapter]
\newtheorem{lemma}[theorem]{Lemma}
\newtheorem{invariant}{Invariant}[chapter]

% For theoremsymbol to work, the label must not be the last command in the
% environment
\theoremsymbol{{\scriptsize~$\Box$}}
\newtheorem{corollary}[theorem]{Corollary}
\newtheorem{definition}[invariant]{Definition}

\theoremstyle{nonumberplain}
\theoremprework{}
\theorempostwork{}
% For theoremsymbol to work, the label must not be the last command in the
% environment
\theoremsymbol{\ensuremath{_\Box}}
\theoremseparator{.}
\theoremheaderfont{\hspace{\parindent}\normalfont\itshape}
\theorembodyfont{\normalfont}
\theoremindent0pt
\newtheorem{proof}{Proof}



%% Custom definitions
%%---------------------------------------------------------------------

\newcommand{\todo}[1]{{\tiny TODO:}~{\textit{#1}}}
\newcommand*{\abbr}[1]{\texorpdfstring{\smash{\mbox{#1}}}{#1}}
\newcommand*{\Om}[1]{\ensuremath{\Omega(#1)}}
\newcommand*{\Oh}[1]{\ensuremath{\mathcal{O}(#1)}}
\newcommand*{\OhT}[1]{\ensuremath{\mathit{\Theta}(#1)}}
%\newcommand*{\code}[1]{{\textbf{#1}}}
\newcommand*{\action}[1]{{\textbf{#1}}}
\newcommand*{\alg}[1]{{\emph{#1}}}
\newcommand*{\proc}[1]{\ensuremath{\textsc{\lowercase{#1}}}}
\newcommand*{\ptr}{\ensuremath{\text{\tiny\raisebox{0.4ex}{$>$}}}}

\newcommand*{\Btree}{\texorpdfstring{\smash{\mbox{B$^+$-tree}}}{B-tree}}
\newcommand*{\Bpuu}{\texorpdfstring{\smash{\mbox{B$^+$-puu}}}{B-puu}}
\newcommand*{\Blinktree}{\smash{\mbox{B$^{\rm link}$-tree}}}
\newcommand*{\Rstartree}{\smash{\mbox{R$^*$-tree}}}
\newcommand*{\LinkRef}{Link$_{\rm Ref}$}
\newcommand*{\Rtree}{\mbox{R-tree}}
\newcommand*{\TSBtree}{\mbox{TSB-tree}}
\newcommand*{\TSBpuu}{\mbox{TSB-puu}}
\newcommand*{\TreeLib}{\abbr{\textsc{TreeLib}}}
\newcommand*{\actver}{\smash{\ensuremath{v_{\text{\textit{active}}}}}}
\newcommand*{\actverp}{\ensuremath{v_{\text{\textit{active}}}}}
\newcommand*{\movever}{\smash{\ensuremath{v_{\text{\textit{move}}}}}}
\newcommand*{\stablever}{\smash{\ensuremath{v_{\text{\textit{stable}}}}}}
\newcommand*{\comver}{\smash{\ensuremath{v_{\text{\textit{commit}}}}}}
\newcommand*{\entries}[1]{\ensuremath{m_{#1}}}
\newcommand*{\liveentries}[1]{\ensuremath{a_{#1}}}
\newcommand*{\rootstar}{\smash{\ensuremath{\text{\textit{root}}^*}}}
\newcommand*{\rootstarp}{\ensuremath{\text{\textit{root}}^*}}
\newcommand*{\capacity}{\ensuremath{B}}
\newcommand*{\pagesize}{\ensuremath{B_b}}
\newcommand*{\txid}[1]{\ensuremath{\text{\textsf{id}}(#1)}}
\newcommand*{\snapver}[1]{\ensuremath{\text{\textsf{snap}}(#1)}}
\newcommand*{\commitver}[1]{\ensuremath{\text{\textsf{commit}}(#1)}}
\newcommand*{\delstate}[1]{\emph{del-\num{#1}}}

\newcommand*{\deletemark}{\ensuremath{\bot}}
\newcommand*{\nullmark}{\ensuremath{\varnothing}}
\newcommand*{\emptymark}{\ensuremath{\varnothing}}
\newcommand*{\updatemark}{\ensuremath{\delta}}
\newcommand*{\returnmark}{\ensuremath{\gamma}}
\newcommand*{\returnset}{\ensuremath{\Gamma}}
\newcommand*{\Nsym}{\ensuremath{\mathbb{N}}}
\newcommand*{\Rsym}{\ensuremath{\mathbb{R}}}

%\newcommand*{\children}[1]{\ensuremath{\text{\it children}(#1)}}
%\newcommand*{\parent}[1]{\ensuremath{\text{\it parent}(#1)}}
%\newcommand*{\height}[1]{\ensuremath{h(#1)}}
\newcommand*{\kr}[1]{\ensuremath{\text{\textsf{kr}}(#1)}}
\newcommand*{\vr}[1]{\ensuremath{\text{\textsf{vr}}(#1)}}
\newcommand*{\kvr}[1]{\ensuremath{\text{\textsf{kvr}}(#1)}}
%\newcommand*{\kvr}[1]{\ensuremath{\text{\it kvr}(#1)}}
\newcommand*{\vrmark}[1]{\smash{\ensuremath{\vv{#1}}}}

\newcommand*{\minsplit}{\ensuremath{\text{\textsf{min-split}}}}
\newcommand*{\maxsplit}{\ensuremath{\text{\textsf{max-split}}}}
\newcommand*{\minlive}{\ensuremath{\text{\textsf{min-live}}}}

\newcommand*{\qtype}[1]{\mbox{\emph{#1}}}

\newcommand*{\geqr}[1]{\geq\negthickspace{}#1}

\newcommand*{\range}[2]{\mbox{\num{#1}--\num{#2}}}
%\newcommand*{\logrecord}[1]{\ensuremath{\langle #1 \rangle}}
\newcommand*{\logact}[1]{\ensuremath{\text{\textbf{#1}}}}
\newcommand*{\lrb}[1]{\ensuremath{\langle #1}}
\newcommand*{\lre}[1]{\ensuremath{#1 \rangle}}

\newcommand*{\calign}[2]{\multicolumn{1}{#1}{#2}}


% Just used to bypass spelling errors
\newcommand*{\sic}[1]{#1}

% Padding used in page figures (which are tables)
\newlength{\padlen}
\newcommand*{\pad}[1]{\setlength{\padlen}{3pt}\setlength{\padlen}{#1\padlen}\hspace{\padlen}}
\newcommand*{\tpad}{\hspace{3pt}}

% Headers used in tables (Table Header EMPHasis)
\newcommand*{\themph}[1]{\textbf{#1}}

%\newcommand{\fignote}[1]{\it\emph{#1}}
\newcommand{\fignote}[1]{#1}
\newcommand{\figcaption}[2]{\caption[#1]{#1. \fignote{#2}}}
\newcommand*{\defpageref}[1]{\mbox{.\quad\emph{p.~\pageref{#1}}}}

\newcommand*{\dbdate}[1]{{\isodate\printdate{#1}}}

\newcommand*{\NP}{NP}

\newcommand*{\secref}[1]{Section~\ref{#1}}
\newcommand*{\chapref}[1]{Chapter~\ref{#1}}
\newcommand*{\apxref}[1]{Appendix~\ref{#1}}
\newcommand*{\defref}[1]{Definition~\ref{#1}}
\newcommand*{\figref}[1]{Figure~\ref{#1}}
\newcommand*{\invref}[1]{Invariant~\ref{#1}}
\newcommand*{\thmref}[1]{Theorem~\ref{#1}}
\newcommand*{\lemmaref}[1]{Lemma~\ref{#1}}
\newcommand*{\corollaryref}[1]{Corollary~\ref{#1}}
\newcommand*{\algref}[1]{Algorithm~\ref{#1}}
\newcommand*{\tableref}[1]{Table~\ref{#1}}
\newcommand*{\secpageref}[1]{\secref{#1}, p.~\pageref{#1}}


\newlength{\testimagewidth}
%\setlength{\testimagewidth}{0.72\textwidth}
\setlength{\testimagewidth}{0.92\textwidth}

\newcommand{\transcom}[1]{\ensuremath{C_{#1}}}
\newcommand{\idcommap}[1]{\smash{\ensuremath{\hat{C}_{#1}}}}

\newcommand*{\email}[1]{\href{mailto:#1}{#1}}
% Bibliography style
\bibliographystyle{abbrv}