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Hi,
I was using SVM https://github.com/ventolab/HGDA/blob/main/mouse_scRNAseq/mouse_human_comparison/LabelTransfer_SupervisedLearning.py for label transfer as you suggested. It ran smoothly except for line 157, where adata_from = downsample(adata_from, args.downsample) generated an error. For me, changing it to adata_from = downsample(adata_from,args.labels[0]) solved the issue.
adata_from = downsample(adata_from, args.downsample)
adata_from = downsample(adata_from,args.labels[0])
Maybe it is worth double-checking.
Kind regards.
The text was updated successfully, but these errors were encountered:
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Hi,
I was using SVM https://github.com/ventolab/HGDA/blob/main/mouse_scRNAseq/mouse_human_comparison/LabelTransfer_SupervisedLearning.py for label transfer as you suggested. It ran smoothly except for line 157, where
adata_from = downsample(adata_from, args.downsample)generated an error. For me, changing it toadata_from = downsample(adata_from,args.labels[0])solved the issue.Maybe it is worth double-checking.
Kind regards.
The text was updated successfully, but these errors were encountered: