problem with segmentation- gray.m and growGray.

[AndrianaRina]

Hi,

I have been using mrVista since 2014 without any issues. However, I recently encountered a problem. At some point, I typed mrVista 3 to check something, and the system prompted me to add an inplane file, followed by the anatomy and segmentation files, even though I had already completed these steps without any problems before. It seemed like the system was attempting to grow the gray matter, but the program failed, and MATLAB terminated unexpectedly.

The MATLAB error report mentioned a problem with a Mex file (please see the details below). I’ve tried all the MATLAB versions I have (2011, 2013, 2015, 2016, 2017, 2018, 2021, and 2024) across Windows, Linux, and macOS, but I keep encountering the same issue. I also attempted to recompile the Mex file, but the problem persists. I used segmentations from FreeSurfer, ITK-SNAP, and ITKGray, but none of these worked.

I even uninstalled and reinstalled both MATLAB and Vistasoft, but nothing changed.

I urgently need to resolve this issue to complete the final part of my analysis and submit my PhD thesis. Could you please help me identify what I might be doing wrong? What are the requirements for running Vistasoft without issues?

Thank you in advance for your assistance.

:-------------------------------------------------------------------------------
Access violation detected at 2024-12-13 16:04:51 -0500

Configuration:
Crash Decoding : Disabled - No sandbox or build area path
Crash Mode : continue (default)
Default Encoding : windows-1252
Deployed : false
Graphics Driver : Intel Intel(R) HD Graphics 530 Version 4.5.0 - Build 27.20.100.9416
Graphics Text Issue Info : xmin=0.000000, ymin=0.000000, xmax=253.499992, ymax=10.500000
Graphics card 1 : Intel Corporation ( 0x8086 ) Intel(R) HD Graphics 530 Version 27.20.100.9416 (2021-3-24)
Graphics card 2 : Citrix Systems Inc. ( 0x5853 ) Citrix Indirect Display Adapter Version 12.40.44.247 (2019-1-23)
Java Version : Java 1.8.0_202-b08 with Oracle Corporation Java HotSpot(TM) 64-Bit Server VM mixed mode
MATLAB Architecture : win64
MATLAB Entitlement ID : 3633855
MATLAB Root : C:\Program Files\MATLAB\R2021b
MATLAB Version : 9.11.0.1873467 (R2021b) Update 3
OpenGL : hardware
Operating System : Microsoft Windows 10 Enterprise
Process ID : 26396
Processor ID : x86 Family 6 Model 94 Stepping 3, GenuineIntel
Session Key : 61b301c4-541d-4f40-854f-c7f54c4aac7d
Window System : Version 10.0 (Build 19044)

Fault Count: 1

Abnormal termination:
Access violation

Current Thread: 'MCR 0 interpreter thread' id 11496

Register State (from fault):
RAX = 0000000000000001 RBX = 0000000000000000
RCX = 00000000000000d9 RDX = 000001b8a0189d50
RSP = 00000001054f8fb0 RBP = 0000000000000000
RSI = 000001b8a0183c20 RDI = 000001b8a01854a0
R8 = 000000000000996d R9 = 0000000000004070
R10 = 0000000000000010 R11 = 000001b8a0183c20
R12 = 000001b8a0189d50 R13 = 0000000000000000
R14 = 00000001054f9170 R15 = 0000000000000000
RIP = 0000000000d57503 EFL = 00010202
CS = 0033 FS = 0053 GS = 002b

Stack Trace (from fault):
[ 0] 0x0000000000d57503 H:\Desktop\vistasoft-master\mrAnatomy\MrGray\GrowGrayMatter\grow_gray.mexw64+00029955 mexFunction+00000979
[ 1] 0x00007ff80bbe5c99 C:\Program Files\MATLAB\R2021b\bin\win64\libmex.dll+00547993 mexfile::Inspector::needs_upgrade+00030057
[ 2] 0x00007ff80bbe9bf2 C:\Program Files\MATLAB\R2021b\bin\win64\libmex.dll+00564210 MexRetrieveVersion+00011378
[ 3] 0x00007ff80bbe9d67 C:\Program Files\MATLAB\R2021b\bin\win64\libmex.dll+00564583 MexRetrieveVersion+00011751
[ 4] 0x00007ff80bbe9f17 C:\Program Files\MATLAB\R2021b\bin\win64\libmex.dll+00565015 [.....].