Update dependencies in pyproject.toml #69

	name: Python Linting and Auto-formatting

	on:
	# Run linting and auto-formatting on every push to the main branch and every push to a
	# pull request
	push:
	branches:
	- main
	- '**'

	jobs:
	format-and-lint:
	runs-on: ubuntu-latest
	steps:
	# Check out the code
	- uses: actions/checkout@v4
	with:
	ref: ${{ github.head_ref }}
	fetch-depth: 0

	# Set up Python 3.11
	- name: Set up Python
	uses: actions/setup-python@v5
	with:
	python-version: '3.11'

	# Install dependencies for linting and auto-formatting
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install isort black==24.4.2 mypy flake8

	# Sort imports
	- name: Run isort
	run: isort .

	# Format code
	- name: Run black
	run: black .

	# Check type hints
	- name: Run mypy
	run: \|
	# add package dependencies for mypy
	dependencies=(
	types-aiofiles
	aiohttp
	fluxus~=1.0
	gamma-pytools~=3.0
	openai
	pandas-stubs
	pytest
	types-PyYAML
	)
	pip install "${dependencies[@]}"

	# run mypy, excluding the legacy llmcheck module
	mypy src test --config-file pyproject.toml

	# Check code style
	- name: Run flake8
	# read configuration from pyproject.toml
	run: flake8 --config tox.ini .

	# Commit changes
	- name: Commit and push changes
	run: \|
	git config --local user.email "[email protected]"
	git config --local user.name "GitHub Actions"
	git add -A
	git commit -m "Apply isort and black formatting" -a \|\| true
	git push

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