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Update 3.1 branch with latest NEON developments #661

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@egbot egbot commented Dec 11, 2024

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kyule and others added 29 commits November 20, 2024 14:37
work around for apparent bug in samples endpoint
- Simple updates to make aquatic herbarium voucher subsampling go live.
- Change to allow harvesting of identifiedBy for dynamically determined baseIDs
subsample aquatic herbarium vouchers
-activates for zoops
-bypasses table with duplicate identifications that lack other determination data
-pulls in and assigns subsample specific identifications
-assigns identified by for default lotids
This applies the error only to relevant collections. The error should only be applied when physical curation might be affected by a change in determination data.
Add google analytics to track search parameters
Add whole query as a parameter
Using occid makes the subsamples identifiable despite their lack of identifier
Allows a link out to the sampleViews object for subsamples
Often a single person will be associated with multiple battelle emails (e.g. @neoninc.org, @battelleecology.org) but only one will have been provided to us for translation in the database.
- Move labeljson backup profile definitions into a directory called backups
- Create a backup of current labeljson profile file
- Optional parameter $allCatNum declared before required parameter $fieldSite is implicitly treated as a required parameter. Optional parameters needed to follow required. However, $allCatNum does not need to be optional.
prior code was creating empty values instead of null values for individual count and lifestage that preventing editing via skeletal file. This uses the neon tables rather than the setCustomAdjustments function to determne whether individual counts and life stage are relevant
preferred that this is the default since failing to version makes the harvester overwrite manually loaded values
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3 participants