Abstractify submodule types #50
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The primary remaining task is to re-implement the optimization algorithm around the new data structures. The most challenging part will be re-implementing the objective functions and constraints for the JuMP optimization, but the new multiply-dispatched diagnostic functions should help since they can in principle be registered to JuMP.
The two-layer model breaks with kappa = 0 because parameters all ill-defined. Instead we can just set kappa = 1e.-8 to recover the behavior of the upper-layer (one-box) model.
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Following up on #45, but separated from other changes that don't require abstract types.