Add install.R to include additional R packages #1
Workflow file for this run
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name: Test container image build | |
on: | |
pull_request: | |
paths: | |
- 'environment.yml' | |
- 'install.R' | |
# Trigger rebuilds if the test process changes | |
- '.github/workflows/test.yaml' | |
jobs: | |
test-build: | |
runs-on: ubuntu-latest | |
steps: | |
# For biggish images, github actions runs out of disk space. | |
# So we cleanup some unwanted things in the disk image, and reclaim that space for our docker use | |
# https://github.com/actions/virtual-environments/issues/2606#issuecomment-772683150 | |
# and https://github.com/easimon/maximize-build-space/blob/b4d02c14493a9653fe7af06cc89ca5298071c66e/action.yml#L104 | |
# This gives us a total of about 52G of free space, which should be enough for now | |
- name: cleanup disk space | |
run: | | |
sudo rm -rf /usr/local/lib/android /usr/share/dotnet /opt/ghc | |
df -h | |
- name: checkout files in repo | |
uses: actions/checkout@main | |
- name: Build the image and push it if `NO_PUSH` disabled | |
uses: jupyterhub/repo2docker-action@master | |
with: # make sure username & password/token matches your registry | |
NO_PUSH: "true" | |
DOCKER_REGISTRY: "quay.io" | |
IMAGE_NAME: "cryointhecloud/cryo-hub-r-image" | |
# Put repo contents in /srv/repo, so they aren't mangled when we put user home in /home/jovyan | |
REPO_DIR: /srv/repo | |
# Lets us monitor disks getting full as images get bigger over time | |
- name: Show how much disk space is left | |
run: df -h |