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fixed indentation
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Daniel-VM committed Aug 30, 2024
1 parent d3c5c1c commit d178c01
Showing 1 changed file with 15 additions and 15 deletions.
30 changes: 15 additions & 15 deletions bu_isciii/templates/mag/DOC/taxprofiler.config
Original file line number Diff line number Diff line change
Expand Up @@ -3,31 +3,31 @@
*/

singularity {
enabled = true
autoMounts = true
singularity.cacheDir = '/data/cnm/ratb/pipelines/singularity-images/'
enabled = true
autoMounts = true
singularity.cacheDir = '/data/cnm/ratb/pipelines/singularity-images/'
}

process {
executor = 'slurm'
queue = 'middle_idx'
jobName = { "$task.name - $task.hash" }
conda = null
executor = 'slurm'
queue = 'middle_idx'
jobName = { "$task.name - $task.hash" }
conda = null

errorStrategy = { task.exitStatus in ((130..145) + 104) ? 'retry' : 'finish' }
errorStrategy = { task.exitStatus in ((130..145) + 104) ? 'retry' : 'finish' }

withName:'KAIJU_KAIJU' {
errorStrategy = { task.exitStatus in [143,137,21,1] ? 'retry' : 'finish' }
errorStrategy = { task.exitStatus in [143,137,21,1] ? 'retry' : 'finish' }
maxRetries = 3
memory = { 72.GB * task.attempt }
time = { 8.h }
}
memory = { 72.GB * task.attempt }
time = { 8.h }
}
}

params {
max_memory = 376.GB
max_cpus = 32
max_time = '24.h'
max_memory = 376.GB
max_cpus = 32
max_time = '24.h'
}

/*
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