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the GMOD database schema
PLpgSQL 38 25
Source code for JBrowse 2, a modern React-based genome browser
TypeScript 211 63
JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
JavaScript 463 199
Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
Groovy 129 85
JBrowse 2 plugin for editing annotations on an Apollo server
A multiple sequence alignment viewer
High performance Variant Call Format (VCF) parser in pure JavaScript
Read CRAM v3 and v2 in node or in the browser
Parse BAM and BAM index files in javascript for node and the browser
Read Tabix-indexed files, either with .tbi or .csi indexes, in node or the browser
Nodejs filehandle for reading bgzip+.gzi compressed files
Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi
add AbortController support to a cache of async requests