fix: complete dependencies of the project

dev-environment.yml

@@ -14,12 +14,18 @@ dependencies:
   - scikit-image=0.*
   - scikit-gstat>=1.0.18,<1.1
   - geoutils=0.1.10
+  - affine
+  - pandas
+  - pyogrio
+  - shapely
 
   # Development-specific, to mirror manually in setup.cfg [options.extras_require].
   - pip
 
   # Optional dependencies
   - pytransform3d
+  - pyyaml
+  - scikit-learn
 
   # Test dependencies
   - gdal  # To test against GDAL
@@ -28,7 +34,7 @@ dependencies:
   - pyyaml
   - flake8
   - pylint
-  - richdem
+  - richdem # To test against richdem
 
   # Doc dependencies
   - sphinx
@@ -47,6 +53,7 @@ dependencies:
     # Optional dependency
     - -e ./
 
+    - noisyopt
     # "Headless" needed for opencv to install without requiring system dependencies
     - opencv-contrib-python-headless
 

environment.yml

@@ -15,6 +15,10 @@ dependencies:
   - scikit-gstat>=1.0.18,<1.1
   - geoutils=0.1.10
   - pip
+  - affine
+  - pandas
+  - pyogrio
+  - shapely
 
    # To run CI against latest GeoUtils
 #  - pip:

requirements.txt

@@ -13,3 +13,7 @@ scikit-image==0.*
 scikit-gstat>=1.0.18,<1.1
 geoutils==0.1.10
 pip
+affine
+pandas
+pyogrio
+shapely

setup.cfg

@@ -49,17 +49,19 @@ include =
 
 [options.extras_require]
 opt =
-    opencv
-    openh264
+    opencv-contrib-python-headless
     pytransform3d
     noisyopt
+    scikit-learn
+    pyyaml
 test =
     pytest
     pytest-xdist
-    pyyaml
     flake8
     pylint
+    scikit-learn
     richdem
+    gdal<=3.8.4
 doc =
     sphinx
     sphinx-book-theme
@@ -72,6 +74,7 @@ doc =
     myst-nb
     numpydoc
 dev =
+    pre-commit
     %(opt)s
     %(test)s
     %(doc)s