Skip to content
ci

doc: update all documentation in preparation for v1.0 #332

Sign in to view logs

doc: update all documentation in preparation for v1.0

doc: update all documentation in preparation for v1.0 #332

Workflow file for this run

.github/workflows/ci.yml at fe95503
name: ci
on:
pull_request:
push:
branches:
- main
defaults:
run:
shell: bash
env:
dataset: ci_test
validation_single_run: '011329'
validation_run_group: B # FIXME: not actually used; see comments mentioning this variable below
concurrency:
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: true
jobs:
# build
#############################################################################
build_timelines:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: setup java
uses: actions/setup-java@v3
with:
java-version: 11
distribution: zulu
- name: build
run: mvn package
- name: tar # to preserve any permissions
run: |
tar czvf build_detectors.tar.gz detectors/target
tar czvf build_monitoring.tar.gz monitoring/target
- uses: actions/upload-artifact@v3
with:
name: build
retention-days: 1
path: build*.tar.gz
build_coatjava:
runs-on: ubuntu-latest
steps:
- name: setup java
uses: actions/setup-java@v3
with:
java-version: 11
distribution: zulu
- name: get coatjava
uses: robinraju/[email protected]
with:
repository: JeffersonLab/coatjava
tag: 10.0.2
tarBall: true
extract: true
- name: rename coatjava release directory
run: |
rm *.tar.gz
mv JeffersonLab-coatjava* coatjava
- name: build coatjava
run: |
cd coatjava
./build-coatjava.sh
- name: tree
run: tree
- name: tar
run: tar czvf build_coatjava.tar.gz coatjava/coatjava
- uses: actions/upload-artifact@v3
with:
name: build
retention-days: 1
path: build*.tar.gz
# download test data
#############################################################################
download_test_data:
runs-on: ubuntu-latest
steps:
- name: download
run: wget --no-check-certificate http://clasweb.jlab.org/clas12offline/distribution/clas12-timeline/validation_files.tar.gz
- uses: actions/upload-artifact@v3
with:
name: validation_files
retention-days: 1
path: validation_files.tar.gz
# monitoring
#############################################################################
run_monitoring:
needs:
- build_timelines
- build_coatjava
- download_test_data
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
type:
- detectors
- physics
steps:
- name: setup java
uses: actions/setup-java@v3
with:
java-version: 11
distribution: zulu
- name: setup groovy
uses: wtfjoke/setup-groovy@v1
with:
groovy-version: 4.x
- name: groovy version
run: groovy --version
- uses: actions/checkout@v3
- uses: actions/download-artifact@v3
with:
name: validation_files
- uses: actions/download-artifact@v3
with:
name: build
- name: untar
run: ls *.tar.gz | xargs -I_ tar xzvf _
- name: tree
run: tree
- name: run monitoring
run: bin/run-monitoring.sh -d ${{env.dataset}} --findhipo --series --focus-${{matrix.type}} validation_files
- name: tree slurm
run: tree slurm
- name: tree outfiles
run: tree outfiles
- uses: actions/upload-artifact@v3
with:
name: slurm
retention-days: 1
path: slurm
- uses: actions/upload-artifact@v3
with:
name: outfiles
retention-days: 1
path: outfiles
test_swifjob:
needs:
- build_timelines
- build_coatjava
- download_test_data
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
type:
- detectors
- physics
steps:
- name: setup java
uses: actions/setup-java@v3
with:
java-version: 11
distribution: zulu
- name: setup groovy
uses: wtfjoke/setup-groovy@v1
with:
groovy-version: 4.x
- name: groovy version
run: groovy --version
- uses: actions/checkout@v3
- uses: actions/download-artifact@v3
with:
name: validation_files
- uses: actions/download-artifact@v3
with:
name: build
- name: untar
run: ls *.tar.gz | xargs -I_ tar xzvf _
- name: tree
run: tree
- name: test monitoring swifjob
run: bin/test-swifjob.sh validation_files/${{env.validation_single_run}} runner --focus-${{matrix.type}}
- name: tree runner
run: tree runner
# timeline production
#############################################################################
run_timelines:
needs:
- run_monitoring
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
type:
- detectors
- physics
include:
- { type: detectors, args: -n 2 -r B } # FIXME: prefer `-r ${{env.validation_run_group}}`, but that's invalid syntax for matrix arg
- { type: physics, args: '' }
steps:
- name: setup java
uses: actions/setup-java@v3
with:
java-version: 11
distribution: zulu
- name: setup groovy
uses: wtfjoke/setup-groovy@v1
with:
groovy-version: 4.x
- name: groovy version
run: groovy --version
- uses: actions/checkout@v3
- uses: actions/download-artifact@v3
with:
name: outfiles
path: outfiles
- uses: actions/download-artifact@v3
with:
name: build
- name: untar
run: ls *.tar.gz | xargs -I_ tar xzvf _
- name: tree
run: tree
- name: run timelines
run: bin/run-${{matrix.type}}-timelines.sh -d ${{env.dataset}} ${{matrix.args}}
- name: tree outfiles
run: tree outfiles
- uses: actions/upload-artifact@v3
with:
name: outfiles
retention-days: 1
path: outfiles
# timeline deployment
#############################################################################
deploy_timelines:
needs:
- run_timelines
runs-on: ubuntu-latest
steps:
- name: setup groovy
uses: wtfjoke/setup-groovy@v1
with:
groovy-version: 4.x
- name: groovy version
run: groovy --version
- uses: actions/checkout@v3
- uses: actions/download-artifact@v3
with:
name: outfiles
path: outfiles
- uses: actions/download-artifact@v3
with:
name: build
- name: untar
run: ls *.tar.gz | xargs -I_ tar xzvf _
- name: tree outfiles
run: tree outfiles
- name: deploy
run: bin/deploy-timelines.sh -d ${{env.dataset}} -c -t web
- uses: actions/upload-artifact@v3
with:
name: web
retention-days: 7
path: web