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Merge branch 'develop' into feature/pip-runtime-deps
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mdavis36 authored Nov 22, 2024
2 parents ee54e3a + 4e27343 commit a0c50e3
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2 changes: 1 addition & 1 deletion .gitlab/os.yml
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Expand Up @@ -18,7 +18,7 @@
.on_blueos_3_ppc64:
variables:
ARCH: 'blueos_3_ppc64le_ib_p9'
GCC_VERSION: '8.3.1'
GCC_VERSION: '10.2.1'
CLANG_VERSION: '9.0.0'
SPHERAL_BUILDS_DIR: /p/gpfs1/sphapp/spheral-ci-builds
extends: [.sys_config]
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3 changes: 3 additions & 0 deletions RELEASE_NOTES.md
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Expand Up @@ -28,6 +28,9 @@ Notable changes include:
* Physics packages can indicate if they require Voronoi cell information be available. If so, a new package which computes and
updates the Voronoi information is automatically added to the package list by the SpheralController (similar to how the
Reproducing Kernel corrections are handled).
* Cleaned up use of std::any in State objects using a visitor pattern to be rigorous ensuring all state entries are handled properly
during assignement, equality, and cloning operations. This is intended to help ensure our Physics advance during time integration
is correct.
* Build changes / improvements:
* Distributed source directory must always be built now.
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6 changes: 3 additions & 3 deletions scripts/devtools/spec-list.json
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Expand Up @@ -7,9 +7,9 @@
]
,
"blueos_3_ppc64le_ib_p9": [
"gcc@8.3.1",
"gcc@8.3.1+cuda~mpi cuda_arch=70",
"gcc@8.3.1+cuda cuda_arch=70"
"gcc@10.2.1",
"gcc@10.2.1+cuda~mpi cuda_arch=70",
"gcc@10.2.1+cuda cuda_arch=70"
]
}
}
10 changes: 5 additions & 5 deletions scripts/spack/configs/blueos_3_ppc64le_ib/compilers.yaml
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Expand Up @@ -13,12 +13,12 @@ compilers:
environment: {}
extra_rpaths: []
- compiler:
spec: gcc@8.3.1
spec: gcc@10.2.1
paths:
cc: /usr/tce/packages/gcc/gcc-8.3.1/bin/gcc
cxx: /usr/tce/packages/gcc/gcc-8.3.1/bin/g++
f77: /usr/tce/packages/gcc/gcc-8.3.1/bin/gfortran
fc: /usr/tce/packages/gcc/gcc-8.3.1/bin/gfortran
cc: /usr/tce/packages/gcc/gcc-10.2.1/bin/gcc
cxx: /usr/tce/packages/gcc/gcc-10.2.1/bin/g++
f77: /usr/tce/packages/gcc/gcc-10.2.1/bin/gfortran
fc: /usr/tce/packages/gcc/gcc-10.2.1/bin/gfortran
flags: {}
operating_system: rhel7
target: ppc64le
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2 changes: 2 additions & 0 deletions scripts/spack/configs/blueos_3_ppc64le_ib/packages.yaml
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Expand Up @@ -39,6 +39,8 @@ packages:
- 10.1.243
buildable: false
externals:
- spec: [email protected]+allow-unsupported-compilers
prefix: /usr/tce/packages/cuda/cuda-11.4.1
- spec: [email protected]~allow-unsupported-compilers
prefix: /usr/tce/packages/cuda/cuda-11.1.0
- spec: [email protected]~allow-unsupported-compilers
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4 changes: 2 additions & 2 deletions src/ArtificialConduction/ArtificialConduction.cc
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Expand Up @@ -121,10 +121,10 @@ evaluateDerivatives(const typename Dimension::Scalar /*time*/,
ReproducingKernel<Dimension> WR;
auto maxOrder = RKOrder::ZerothOrder;
if (useRK) {
const auto& rkOrders = state.template getAny<std::set<RKOrder>>(RKFieldNames::rkOrders);
const auto& rkOrders = state.template get<std::set<RKOrder>>(RKFieldNames::rkOrders);
CHECK(not rkOrders.empty());
const auto maxOrder = *rkOrders.rbegin();
WR = state.template getAny<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(maxOrder));
WR = state.template get<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(maxOrder));
}

// The connectivity map
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2 changes: 1 addition & 1 deletion src/ArtificialViscosity/TensorCRKSPHViscosity.cc
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Expand Up @@ -184,7 +184,7 @@ calculateSigmaAndGradDivV(const DataBase<Dimension>& dataBase,
const auto velocity = state.fields(HydroFieldNames::velocity, Vector::zero);
const auto rho = state.fields(HydroFieldNames::massDensity, 0.0);
const auto H = state.fields(HydroFieldNames::H, SymTensor::zero);
const auto WR = state.template getAny<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(order));
const auto WR = state.template get<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(order));
const auto corrections = state.fields(RKFieldNames::rkCorrections(order), RKCoefficients<Dimension>());

const auto& connectivityMap = dataBase.connectivityMap();
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2 changes: 1 addition & 1 deletion src/ArtificialViscosity/VonNeumanViscosity.cc
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Expand Up @@ -83,7 +83,7 @@ initialize(const DataBase<Dimension>& dataBase,
const auto pressure = state.fields(HydroFieldNames::pressure, 0.0);
const auto soundSpeed = state.fields(HydroFieldNames::soundSpeed, 0.0);
const auto vol = mass/massDensity;
const auto WR = state.template getAny<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(order));
const auto WR = state.template get<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(order));
const auto corrections = state.fields(RKFieldNames::rkCorrections(order), RKCoefficients<Dimension>());

// We'll compute the higher-accuracy RK gradient.
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4 changes: 2 additions & 2 deletions src/CRKSPH/CRKSPHEvaluateDerivatives.cc
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Expand Up @@ -16,7 +16,7 @@ evaluateDerivatives(const typename Dimension::Scalar /*time*/,
auto& Q = this->artificialViscosity();

// The kernels and such.
const auto& WR = state.template getAny<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(mOrder));
const auto& WR = state.template get<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(mOrder));

// A few useful constants we'll use in the following loop.
//const double tiny = 1.0e-30;
Expand Down Expand Up @@ -65,7 +65,7 @@ evaluateDerivatives(const typename Dimension::Scalar /*time*/,
auto maxViscousPressure = derivatives.fields(HydroFieldNames::maxViscousPressure, 0.0);
auto effViscousPressure = derivatives.fields(HydroFieldNames::effectiveViscousPressure, 0.0);
auto viscousWork = derivatives.fields(HydroFieldNames::viscousWork, 0.0);
auto& pairAccelerations = derivatives.getAny(HydroFieldNames::pairAccelerations, vector<Vector>());
auto& pairAccelerations = derivatives.get(HydroFieldNames::pairAccelerations, vector<Vector>());
auto XSPHDeltaV = derivatives.fields(HydroFieldNames::XSPHDeltaV, Vector::zero);
CHECK(DxDt.size() == numNodeLists);
CHECK(DrhoDt.size() == numNodeLists);
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6 changes: 3 additions & 3 deletions src/CRKSPH/CRKSPHHydroBase.cc
Original file line number Diff line number Diff line change
Expand Up @@ -263,7 +263,7 @@ registerDerivatives(DataBase<Dimension>& dataBase,
derivs.enroll(mDspecificThermalEnergyDt);
derivs.enroll(mDvDx);
derivs.enroll(mInternalDvDx);
derivs.enrollAny(HydroFieldNames::pairAccelerations, mPairAccelerations);
derivs.enroll(HydroFieldNames::pairAccelerations, mPairAccelerations);
}

//------------------------------------------------------------------------------
Expand All @@ -282,7 +282,7 @@ preStepInitialize(const DataBase<Dimension>& dataBase,
if (mDensityUpdate == MassDensityType::RigorousSumDensity or
mDensityUpdate == MassDensityType::VoronoiCellDensity) {
auto massDensity = state.fields(HydroFieldNames::massDensity, 0.0);
const auto& WR = state.template getAny<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(mOrder));
const auto& WR = state.template get<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(mOrder));
const auto& W = WR.kernel();
const auto& connectivityMap = dataBase.connectivityMap();
const auto mass = state.fields(HydroFieldNames::mass, 0.0);
Expand Down Expand Up @@ -311,7 +311,7 @@ initialize(const typename Dimension::Scalar time,
State<Dimension>& state,
StateDerivatives<Dimension>& derivs) {
// Initialize the artificial viscosity
const auto& WR = state.template getAny<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(mOrder));
const auto& WR = state.template get<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(mOrder));
auto& Q = this->artificialViscosity();
Q.initialize(dataBase,
state,
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4 changes: 2 additions & 2 deletions src/CRKSPH/CRKSPHHydroBaseRZ.cc
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Expand Up @@ -219,7 +219,7 @@ evaluateDerivatives(const Dim<2>::Scalar /*time*/,

// The kernels and such.
//const auto order = this->correctionOrder();
const auto& WR = state.template getAny<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(mOrder));
const auto& WR = state.template get<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(mOrder));

// A few useful constants we'll use in the following loop.
//const auto tiny = 1.0e-30;
Expand Down Expand Up @@ -263,7 +263,7 @@ evaluateDerivatives(const Dim<2>::Scalar /*time*/,
auto maxViscousPressure = derivatives.fields(HydroFieldNames::maxViscousPressure, 0.0);
auto effViscousPressure = derivatives.fields(HydroFieldNames::effectiveViscousPressure, 0.0);
auto viscousWork = derivatives.fields(HydroFieldNames::viscousWork, 0.0);
auto& pairAccelerations = derivatives.getAny(HydroFieldNames::pairAccelerations, vector<Vector>());
auto& pairAccelerations = derivatives.get(HydroFieldNames::pairAccelerations, vector<Vector>());
auto XSPHDeltaV = derivatives.fields(HydroFieldNames::XSPHDeltaV, Vector::zero);
CHECK(DxDt.size() == numNodeLists);
CHECK(DrhoDt.size() == numNodeLists);
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4 changes: 2 additions & 2 deletions src/CRKSPH/SolidCRKSPHHydroBase.cc
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Expand Up @@ -258,7 +258,7 @@ evaluateDerivatives(const typename Dimension::Scalar /*time*/,

// The kernels and such.
const auto order = this->correctionOrder();
const auto& WR = state.template getAny<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(order));
const auto& WR = state.template get<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(order));

// A few useful constants we'll use in the following loop.
//const double tiny = 1.0e-30;
Expand Down Expand Up @@ -318,7 +318,7 @@ evaluateDerivatives(const typename Dimension::Scalar /*time*/,
auto maxViscousPressure = derivatives.fields(HydroFieldNames::maxViscousPressure, 0.0);
auto effViscousPressure = derivatives.fields(HydroFieldNames::effectiveViscousPressure, 0.0);
auto viscousWork = derivatives.fields(HydroFieldNames::viscousWork, 0.0);
auto& pairAccelerations = derivatives.getAny(HydroFieldNames::pairAccelerations, vector<Vector>());
auto& pairAccelerations = derivatives.get(HydroFieldNames::pairAccelerations, vector<Vector>());
auto XSPHDeltaV = derivatives.fields(HydroFieldNames::XSPHDeltaV, Vector::zero);
auto DSDt = derivatives.fields(IncrementState<Dimension, SymTensor>::prefix() + SolidFieldNames::deviatoricStress, SymTensor::zero);
CHECK(DxDt.size() == numNodeLists);
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4 changes: 2 additions & 2 deletions src/CRKSPH/SolidCRKSPHHydroBaseRZ.cc
Original file line number Diff line number Diff line change
Expand Up @@ -275,7 +275,7 @@ evaluateDerivatives(const Dim<2>::Scalar /*time*/,

// The kernels and such.
const auto order = this->correctionOrder();
const auto& WR = state.template getAny<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(order));
const auto& WR = state.template get<ReproducingKernel<Dimension>>(RKFieldNames::reproducingKernel(order));

// A few useful constants we'll use in the following loop.
//const double tiny = 1.0e-30;
Expand Down Expand Up @@ -334,7 +334,7 @@ evaluateDerivatives(const Dim<2>::Scalar /*time*/,
auto maxViscousPressure = derivatives.fields(HydroFieldNames::maxViscousPressure, 0.0);
auto effViscousPressure = derivatives.fields(HydroFieldNames::effectiveViscousPressure, 0.0);
auto viscousWork = derivatives.fields(HydroFieldNames::viscousWork, 0.0);
auto& pairAccelerations = derivatives.getAny(HydroFieldNames::pairAccelerations, vector<Vector>());
auto& pairAccelerations = derivatives.get(HydroFieldNames::pairAccelerations, vector<Vector>());
auto XSPHDeltaV = derivatives.fields(HydroFieldNames::XSPHDeltaV, Vector::zero);
auto DSDt = derivatives.fields(IncrementState<Dimension, SymTensor>::prefix() + SolidFieldNames::deviatoricStress, SymTensor::zero);
CHECK(DxDt.size() == numNodeLists);
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2 changes: 1 addition & 1 deletion src/DEM/IncrementPairFieldList.cc
Original file line number Diff line number Diff line change
Expand Up @@ -50,7 +50,7 @@ update(const KeyType& key,
// Find all the available matching derivative FieldList keys.
const auto incrementKey = prefix() + fieldKey;
// cerr << "IncrementPairFieldList: [" << fieldKey << "] [" << incrementKey << "] : " << endl;
const auto allkeys = derivs.fieldKeys();
const auto allkeys = derivs.fullFieldKeys();
vector<string> incrementKeys;
for (const auto& key: allkeys) {
// if (std::regex_search(key, std::regex("^" + incrementKey))) {
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6 changes: 3 additions & 3 deletions src/DEM/SolidBoundary/CircularPlaneSolidBoundary.cc
Original file line number Diff line number Diff line change
Expand Up @@ -63,9 +63,9 @@ registerState(DataBase<Dimension>& dataBase,
const auto pointKey = boundaryKey +"_point";
const auto velocityKey = boundaryKey +"_velocity";
const auto normalKey = boundaryKey +"_normal";
state.enrollAny(pointKey,mPoint);
state.enrollAny(pointKey,mVelocity);
state.enrollAny(pointKey,mNormal);
state.enroll(pointKey,mPoint);
state.enroll(pointKey,mVelocity);
state.enroll(pointKey,mNormal);
}

template<typename Dimension>
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6 changes: 3 additions & 3 deletions src/DEM/SolidBoundary/ClippedSphereSolidBoundary.cc
Original file line number Diff line number Diff line change
Expand Up @@ -87,9 +87,9 @@ registerState(DataBase<Dimension>& dataBase,
const auto clipPointKey = boundaryKey +"_clipPoint";
const auto velocityKey = boundaryKey +"_velocity";

state.enrollAny(pointKey,mCenter);
state.enrollAny(clipPointKey,mClipPoint);
state.enrollAny(pointKey,mVelocity);
state.enroll(pointKey,mCenter);
state.enroll(clipPointKey,mClipPoint);
state.enroll(pointKey,mVelocity);

}

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6 changes: 3 additions & 3 deletions src/DEM/SolidBoundary/CylinderSolidBoundary.cc
Original file line number Diff line number Diff line change
Expand Up @@ -64,9 +64,9 @@ registerState(DataBase<Dimension>& dataBase,
const auto pointKey = boundaryKey +"_point";
const auto velocityKey = boundaryKey +"_velocity";
//const auto normalKey = boundaryKey +"_normal";
state.enrollAny(pointKey,mPoint);
state.enrollAny(pointKey,mVelocity);
//state.enrollAny(pointKey,mNormal);
state.enroll(pointKey,mPoint);
state.enroll(pointKey,mVelocity);
//state.enroll(pointKey,mNormal);
}

template<typename Dimension>
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6 changes: 3 additions & 3 deletions src/DEM/SolidBoundary/InfinitePlaneSolidBoundary.cc
Original file line number Diff line number Diff line change
Expand Up @@ -54,9 +54,9 @@ registerState(DataBase<Dimension>& dataBase,
const auto pointKey = boundaryKey +"_point";
const auto velocityKey = boundaryKey +"_velocity";
const auto normalKey = boundaryKey +"_normal";
state.enrollAny(pointKey,mPoint);
state.enrollAny(velocityKey,mVelocity);
state.enrollAny(normalKey,mNormal);
state.enroll(pointKey,mPoint);
state.enroll(velocityKey,mVelocity);
state.enroll(normalKey,mNormal);
}

template<typename Dimension>
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4 changes: 2 additions & 2 deletions src/DEM/SolidBoundary/RectangularPlaneSolidBoundary.cc
Original file line number Diff line number Diff line change
Expand Up @@ -57,8 +57,8 @@ registerState(DataBase<Dimension>& dataBase,
const auto boundaryKey = "RectangularPlaneSolidBoundary_" + std::to_string(std::abs(this->uniqueIndex()));
const auto pointKey = boundaryKey +"_point";
const auto velocityKey = boundaryKey +"_velocity";
state.enrollAny(pointKey,mPoint);
state.enrollAny(velocityKey,mVelocity);
state.enroll(pointKey,mPoint);
state.enroll(velocityKey,mVelocity);
}
template<typename Dimension>
void
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4 changes: 2 additions & 2 deletions src/DEM/SolidBoundary/SphereSolidBoundary.cc
Original file line number Diff line number Diff line change
Expand Up @@ -62,8 +62,8 @@ registerState(DataBase<Dimension>& dataBase,
const auto pointKey = boundaryKey +"_point";
const auto velocityKey = boundaryKey +"_velocity";

state.enrollAny(pointKey,mCenter);
state.enrollAny(pointKey,mVelocity);
state.enroll(pointKey,mCenter);
state.enroll(pointKey,mVelocity);

}

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4 changes: 2 additions & 2 deletions src/DataBase/CopyStateInline.hh
Original file line number Diff line number Diff line change
Expand Up @@ -42,10 +42,10 @@ update(const KeyType& key,
REQUIRE(key == mCopyStateName);

// The state we're updating
ValueType& f = state.template getAny<ValueType>(key);
ValueType& f = state.template get<ValueType>(key);

// The master state we're copying
const ValueType& fmaster = state.template getAny<ValueType>(mMasterStateName);
const ValueType& fmaster = state.template get<ValueType>(mMasterStateName);

// Copy the master state using the assignment operator
f = fmaster;
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1 change: 0 additions & 1 deletion src/DataBase/DataBase.cc
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,6 @@
#include "Material/EquationOfState.hh"
#include "Utilities/testBoxIntersection.hh"
#include "Utilities/safeInv.hh"
#include "State.hh"
#include "Hydro/HydroFieldNames.hh"
#include "Utilities/globalBoundingVolumes.hh"
#include "Utilities/globalNodeIDs.hh"
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