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John Sundh edited this page Nov 25, 2020
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Welcome to the contigtax wiki!
contigtax assigns taxonomy to contigs/ORFs using diamond blastx/blastp
against a protein database (currently contigtax supports download/build of uniref50
, uniref90
, uniref100
and the nr
database) but any protein database can be used as long as protein identifiers can be mapped to NCBI taxonomy ids.