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  1. OpenMMDL OpenMMDL Public

    Forked from wolberlab/OpenMMDL

    Interface to OpenMM for easy setup of molecular dynamic simulations of protein-ligand complexes

    Python

  2. openmmdlanalysis openmmdlanalysis Public

    Forked from talagayev/openmmdlanalysis

    Python

  3. pyrod pyrod Public

    Forked from wolberlab/pyrod

    PyRod - Tracing water molecules in molecular dynamics simulations

    Python

  4. mdpath mdpath Public

    Forked from wolberlab/mdpath

    MDPath - A tool for calculating allosteric communication pathways in proteins by analyzing the mutual information of residue dihedral angle movements throughout an MD simulation.

    Python