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ENH: adding gabor filters to ndimage #4

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ENH: adding gabor filters to ndimage #4

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@ryanlu41 ryanlu41 commented Mar 11, 2020

Reference issue

Closes scipy#11583

What does this implement/fix?

This adds gabor_filters to the ndimage module. For verification of correctness of algorithm, see
https://github.com/NeuroDataDesign/mouselit/blob/master/ryan/Mouselight/Gabor%20Filter%20Verification.ipynb

Additional information

Created by Thomas Athey and Ryan Lu

ryanlu41 pushed a commit that referenced this pull request May 12, 2020
ryanlu41 pushed a commit that referenced this pull request May 12, 2020
57f9aa928 Merge remote-tracking branch 'upstream/master'
f6b518d13 Remove print statements
9970e1ca7 Change order of model status enums and export enums to make consistency automatic; found upstream bug in simplex solver
1e06c8a51 Merge pull request scipy#333 from ERGO-Code/dev-presolve
e6b6f3162 actually moved files now
5d5faf597 scaffold files copied out. TestPresolve runs OK: now time to extract exec details from presolve.
689a24ebc path to files of HiGHS or scaffold fixed. TestPresolve works.
c391eb362 instances added
6d339204b test presolve now not finding test files: the scaffold lib does not know where check/ is. it is easiest if we add files to scaffold and use them for test.
ba10975f8 cmake fixes scaffold building with Highs.h in TestPresolve
e53363dab added failing line to TestPresolve. cmake files fixes removed two issues. still get an error
eef016f10 Merge pull request scipy#332 from ERGO-Code/ImproveCAPIexample
aec2f6f5a Added a lot of comments to examples/call_highs_from_c.c
84e9f0e50 Names of arrays in examples/call_highs_from_c.c now match those in highs_c_api.cpp, and Highs_passLp is now correct in handling astart with only numcol entries
8b85654d8 command line options library moved to app/ so out of src/
4d1534338 uses interface libraries in cmake
b6a902fd6 Merge pull request scipy#318 from ERGO-Code/newlpfilereader
134c2b0f3 Merge branch 'master' into dev-presolve
deed95b6e Merge remote-tracking branch 'ergo/master'
04472e386 fixed bug in .lp filewriter
8f54ecee3 fixed compilation issues
8483eaf12 Merge branch 'master' into newlpfilereader
79cec5994 Check primal feasibility to know if solution exists
02e0c8cb4 separated test from dev namespaces. next: add tests for component and dev
1fab41ba5 Merge pull request #4 from galabovaa/dev-presolve
c15eeaa25 removed unnecesary code in LP filereader
94e82f41d added missing header
29055001c updated LP filereader
d3108f2cc pull bugfix from reader repository
f1b684001 replace LP filereader

git-subtree-dir: scipy/optimize/_highs
git-subtree-split: 57f9aa928c5232092819807e726d3444650d42ad
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gabor filter and PCA whitening in ndimage
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