Merge pull request #87 from PNNL-CompBio/data-trigger

Data trigger
PNNL-CompBio · Jun 28, 2024 · 009e8bc · 009e8bc
2 parents 46f59ef + 861135c
commit 009e8bc
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diff --git a/.github/workflows/docker-build.yml b/.github/workflows/docker-build.yml
@@ -4,74 +4,87 @@ defaults:
     working-directory: ./
 on:
   push:
-    paths: 
-      - zfBmd/
-      - zfExp/
-      - sampleChemMapping/
-      - dbSchema/
-      - exposome/
+    branches:
+      - "*"
+    paths:
+      - "*"
+
+#      - .github/
+#      - zfBmd/
+#      - zfExp/
+#      - sampleChemMapping/
+#      - dbSchema/
+#      - exposome/
 
 jobs:
   build-and-push:
     runs-on: ubuntu-latest
     steps:
       - name: Checkout
-        uses: actions/checkout@v2
+        uses: actions/checkout@v3
       - name: Set up QEMU
-        uses: docker/setup-qemu-action@v2
+        uses: docker/setup-qemu-action@v3
       - name: Set up Docker Buildx
-        uses: docker/setup-buildx-action@v2
+        uses: docker/setup-buildx-action@v3
       - name: Login to DockerHub
         uses: docker/login-action@v2
         with:
           username: ${{ secrets.DOCKERHUB_USERNAME }}
           password: ${{ secrets.DOCKERHUB_PASSWORD }}
-      - name: Build and push bmd
-        uses: docker/build-push-action@v3
+      - name: Build and push sampleChem
+        uses: docker/build-push-action@v6
         with:
-          context: zfBmd
+          file: ./sampleChemMapping/Dockerfile
+          tags: sgosline/srp-samplechem:latest
           push: true
-          tags: sgosline/srp-zfbmd:latest
-          platforms: linux/amd64,linux/arm64       
-      - name: Build and push bmd2Samps
-        uses: docker/build-push-action@v3
-        with:
-          context: old/bmd2Samps
-          push: true
-          tags: sgosline/srp-bmd2samps:v1
-          platforms: linux/amd64,linux/arm64       
-      - name: Build and push version 2 bmd2Samps
-        uses: docker/build-push-action@v3
+          platforms:
+            - linux/amd64
+            - linux/arm64
+      - name: Build and push exposome
+        uses: docker/build-push-action@v6
         with:
-          context: old/bmd2Samps_v2
+          file: ./exposome/Dockerfile
           push: true
-          tags: sgosline/srp-bmd2samps:2
-          platforms: linux/amd64,linux/arm64  
-      - name: Build and push version 3 bmd2Samps
-        uses: docker/build-push-action@v3
+          tags: sgosline/srp-exposome:latest     
+          platforms:
+            - linux/amd64
+            - linux/arm64
+      - name: Build and push dbSchema
+        uses: docker/build-push-action@v6
         with:
-          context: sampleChemMapping
+          file: ./dbSchema/Dockerfile
           push: true
-          tags: sgosline/srp-bmd2samps:latest
-          platforms: linux/amd64,linux/arm64   
-      - name: Build and push exposome
-        uses: docker/build-push-action@v3
+          tags: sgosline/srp-dbschema
+          platforms:
+            - linux/amd64
+            - linux/arm64
+      - name: Build and push expression
+        uses: docker/build-push-action@v6
         with:
-          context: exposome
+          file: ./zfExp/Dockerfile
           push: true
-          tags: sgosline/srp-exposome:latest     
-          platforms: linux/amd64,linux/arm64  
-#      - name: Build and push dbSchema
-#        uses: docker/build-push-action@v3
+          tags: sgosline/srp-zfexp
+          platforms:
+            - linux/amd64
+            - linux/arm64
+#      - name: Build and push bmd
+#        uses: docker/build-push-action@v6
 #        with:
-#          context: dbSchema
+#          context: zfBmd
 #          push: true
-#          tags: sgosline/srp-dbschema
+#          tags: sgosline/srp-zfbmd:latest
+#          platforms: linux/amd64,linux/arm64       
+#      - name: Build and push bmd2Samps
+#        uses: docker/build-push-action@v6
+#        with:
+#          context: old/bmd2Samps
+#          push: true
+#          tags: sgosline/srp-bmd2samps:v1
+#          platforms: linux/amd64,linux/arm64       
+#      - name: Build and push version 2 bmd2Samps
+#        uses: docker/build-push-action@v6
+#        with:
+#          context: old/bmd2Samps_v2
+#          push: true
+#          tags: sgosline/srp-bmd2samps:latest
 #          platforms: linux/amd64,linux/arm64
-      - name: Build and push expression
-        uses: docker/build-push-action@v3
-        with:
-          context: zfExp
-          push: true
-          tags: sgosline/srp-zfexp
-          platforms: linux/amd64,linux/arm64