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Fix some issues with NumPy 2.0 #279

Fix some issues with NumPy 2.0

Fix some issues with NumPy 2.0 #279

Workflow file for this run

name: Tests
on: [push, pull_request]
jobs:
tests:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ['3.8', '3.9', '3.10', '3.11', '3.12-dev']
# https://numpy.org/neps/nep-0029-deprecation_policy.html
numpy-version: ['1.22', 'latest', 'dev']
fail-fast: false
steps:
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Install Dependencies
run: |
set -x
set -e
python -m pip install pyflakes pytest pytest-doctestplus hypothesis pytest-cov pytest-flakes packaging
if [[ ${{ matrix.numpy-version }} == 'latest' ]]; then
python -m pip install --pre --upgrade numpy
elif [[ ${{ matrix.numpy-version }} == 'dev' ]]; then
python -m pip install --pre --upgrade --extra-index https://pypi.anaconda.org/scientific-python-nightly-wheels/simple numpy
else
python -m pip install --upgrade numpy==${{ matrix.numpy-version }}.*
fi
- name: Run Tests
run: |
set -x
set -e
python -We:invalid -We::SyntaxWarning -m compileall -f -q ndindex/
# The coverage requirement check is done by the coverage report line below
PYTEST_FLAGS="$PYTEST_FLAGS -v --cov-fail-under=0";
pytest $PYTEST_FLAGS
./run_doctests
# Make sure it installs
python setup.py install
# Coverage. This also sets the failing status if the
# coverage is not 100%. Travis sometimes cuts off the last command, which is
# why we print stuff at the end.
if ! coverage report -m; then
echo "Coverage failed";
false;
else
echo "Coverage passed";
fi;