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Update 13 packages #37

Merged
merged 1 commit into from
Dec 4, 2024
Merged

Update 13 packages #37

merged 1 commit into from
Dec 4, 2024

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milanmlft
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🤖 This is an automated build

This will update 13 packages in your lesson with the following versions:

# NEW OR REMOVED PACKAGES -------------------------------
- MASS      [required by car, doBy, ggplot2, and 4 others]
- Matrix    [required by doBy, igraph, lme4, and 3 others]
- mgcv      [required by car, ggplot2]
- nnet      [required by car]
- survival  [required by quantreg]
- MASS       [7.3-61 -> *]
- Matrix     [1.7-1 -> *]
- mgcv       [1.9-1 -> *]
- nnet       [7.3-19 -> *]
- survival   [3.7-0 -> *]
- R          [4.4.1 -> 4.4.2]

# CRAN -----------------------------------------------------------------------
- curl          [5.2.3 -> 6.0.1]
- fontawesome   [0.5.2 -> 0.5.3]
- knitr         [1.48 -> 1.49]
- later         [1.3.2 -> 1.4.1]
- olsrr         [0.6.0 -> 0.6.1]
- promises      [1.3.0 -> 1.3.2]
- quantreg      [5.99 -> 5.99.1]
- RSQLite       [2.3.7 -> 2.3.8]
- MASS          [* -> 7.3-61]
- Matrix        [* -> 1.7-1]
- mgcv          [* -> 1.9-1]
- nnet          [* -> 7.3-19]
- survival      [* -> 3.7-0]

⏱️ In a few minutes, a comment will appear that will show you how the output has changed based on these updates.

If you want to inspect these changes locally, you can use the following code to check out a new branch:

git fetch origin update/packages
git checkout update/packages

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github-actions bot commented Dec 3, 2024

Thank you!

Thank you for your pull request 😃

🤖 This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

  • 🎯 correct output
  • 🖼️ correct figures
  • ❓ new warnings
  • ‼️ new errors

Rendered Changes

🔍 Inspect the changes: https://github.com/UCL-ARC/r-amr-epidemiology/compare/md-outputs..md-outputs-PR-37

The following changes were observed in the rendered markdown documents:

 01-rstudio-intro.md                                |    2 +-
 02-project-intro.md                                |    2 +-
 03-seeking-help.md                                 |    2 +-
 config.yaml (gone)                                 |  112 -
 fig/23-statistics-rendered-unnamed-chunk-4-1.png   |  Bin 4397 -> 4416 bytes
 fig/23-statistics-rendered-unnamed-chunk-4-2.png   |  Bin 4395 -> 4338 bytes
 ...nreg-diagnostics-rendered-unnamed-chunk-8-1.png |  Bin 24544 -> 24443 bytes
 md5sum.txt                                         |   76 +-
 renv.lock (gone)                                   | 2162 --------------------
 9 files changed, 41 insertions(+), 2315 deletions(-)
What does this mean?

If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible.

This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

⏱️ Updated at 2024-12-03 00:13:55 +0000

github-actions bot pushed a commit that referenced this pull request Dec 3, 2024
@milanmlft milanmlft merged commit 7ff8f88 into main Dec 4, 2024
3 checks passed
@milanmlft milanmlft deleted the update/packages branch December 4, 2024 15:33
github-actions bot pushed a commit that referenced this pull request Dec 4, 2024
Auto-generated via `{sandpaper}`
Source  : 7ff8f88
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-12-04 15:33:38 +0000
Message : Update 13 packages (#37)

Co-authored-by: milanmlft <[email protected]>
github-actions bot pushed a commit that referenced this pull request Dec 4, 2024
Auto-generated via `{sandpaper}`
Source  : e2b23d0
Branch  : md-outputs
Author  : GitHub Actions <[email protected]>
Time    : 2024-12-04 15:39:10 +0000
Message : markdown source builds

Auto-generated via `{sandpaper}`
Source  : 7ff8f88
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-12-04 15:33:38 +0000
Message : Update 13 packages (#37)

Co-authored-by: milanmlft <[email protected]>
github-actions bot pushed a commit that referenced this pull request Dec 10, 2024
Auto-generated via `{sandpaper}`
Source  : 7ff8f88
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-12-04 15:33:38 +0000
Message : Update 13 packages (#37)

Co-authored-by: milanmlft <[email protected]>
github-actions bot pushed a commit that referenced this pull request Dec 10, 2024
Auto-generated via `{sandpaper}`
Source  : 7878a50
Branch  : md-outputs
Author  : GitHub Actions <[email protected]>
Time    : 2024-12-10 00:05:35 +0000
Message : markdown source builds

Auto-generated via `{sandpaper}`
Source  : 7ff8f88
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-12-04 15:33:38 +0000
Message : Update 13 packages (#37)

Co-authored-by: milanmlft <[email protected]>
github-actions bot pushed a commit that referenced this pull request Dec 17, 2024
Auto-generated via `{sandpaper}`
Source  : 7878a50
Branch  : md-outputs
Author  : GitHub Actions <[email protected]>
Time    : 2024-12-10 00:05:35 +0000
Message : markdown source builds

Auto-generated via `{sandpaper}`
Source  : 7ff8f88
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-12-04 15:33:38 +0000
Message : Update 13 packages (#37)

Co-authored-by: milanmlft <[email protected]>
github-actions bot pushed a commit that referenced this pull request Dec 24, 2024
Auto-generated via `{sandpaper}`
Source  : 7878a50
Branch  : md-outputs
Author  : GitHub Actions <[email protected]>
Time    : 2024-12-10 00:05:35 +0000
Message : markdown source builds

Auto-generated via `{sandpaper}`
Source  : 7ff8f88
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-12-04 15:33:38 +0000
Message : Update 13 packages (#37)

Co-authored-by: milanmlft <[email protected]>
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