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Wasting Module #543

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Fixes #542

@tbhallett tbhallett mentioned this pull request Apr 6, 2022
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mnjowe and others added 25 commits October 5, 2023 09:01
…running without errors. added wasting analysis file to get more understanding of the current outputs before applying some major changes. added wasting resource file
# Conflicts:
#	src/tlo/methods/hsi_generic_first_appts.py
called the function nutritional_oedema_present within the WastingNaturalRecoveryEvent to reset the values for the oedema status based on WHZ>=-2
Removed progression to severe following treatment failure for MAM, at initialise population. These individuals will be called at the next polling event (in 3 months) to determine their outcome - recovery, remain, or death.
…lett/wasting_module

# Conflicts:
#	src/tlo/methods/wasting.py
# Conflicts:
#	resources/healthsystem/priority_policies/ResourceFile_PriorityRanking_ALLPOLICIES.xlsx
…lett/wasting_module

# Conflicts:
#	resources/ResourceFile_Wasting.xlsx
#	src/scripts/wasting_analyses/analysis_wasting.py
#	src/tlo/methods/hsi_generic_first_appts.py
#	src/tlo/methods/wasting.py
#	tests/test_wasting.py
…developed; natural recovery from severe wasting if not dying;date_of_outcome_for_untreated_wasting's fnc input parameter changed to whz_category
# Conflicts:
#	resources/healthsystem/priority_policies/ResourceFile_PriorityRanking_ALLPOLICIES.xlsx
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Wasting Outputs Complete the Wasting module