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Read + Write Zarr with consolidated metadata #1460

Read + Write Zarr with consolidated metadata

Read + Write Zarr with consolidated metadata #1460

###
# Build hdf4, hdf5 dependencies and cache them in a combined directory.
# See https://docs.github.com/en/actions/using-github-hosted-runners/about-github-hosted-runners
# for information related to github runners.
###
name: Run MSYS2, MinGW64-based Tests (Not Visual Studio)
env:
CPPFLAGS: "-D_BSD_SOURCE"
REMOTETESTDOWN: ${{ vars.REMOTETESTDOWN }}
on: [pull_request,workflow_dispatch]
concurrency:
group: ${{ github.workflow}}-${{ github.head_ref }}
cancel-in-progress: true
jobs:
build-and-test-autotools:
runs-on: windows-latest
strategy:
matrix:
msystem: [ MINGW64, UCRT64] #, CLANG64 ]
defaults:
run:
shell: msys2 {0}
steps:
- uses: actions/checkout@v4
- uses: msys2/setup-msys2@v2
with:
msystem: ${{ matrix.msystem }}
update: true
pacboy: cc:p autotools:p hdf5:p curl:p libxml2:p zlib:p blosc:p bzip2:p
install: diffutils m4 git unzip
###
# Configure and build
###
- name: (Autotools) Run autoconf
run: autoreconf -if
- name: (Autotools) Configure Build
run: ./configure --enable-hdf5 --enable-dap --disable-dap-remote-tests --disable-static --disable-byterange --disable-dap-remote-tests --disable-logging --enable-plugins --disable-nczarr-filters --disable-s3
if: ${{ success() }}
- name: (Autotools) Look at config.log if error
run: cat config.log
if: ${{ failure() }}
- name: (Autotools) Print Summary
run: cat libnetcdf.settings
- name: (Autotools) Build Library and Utilities
run: make -j 8 LDFLAGS="-Wl,--export-all-symbols"
if: ${{ success() }}
- name: Check for plugins
run: |
dir ./plugins
if test -f ./plugins/.libs ; then dir ./plugins/.libs; fi
- name: (Autotools) Build and Run Tests
run: make check -j 8 LDFLAGS="-Wl,--export-all-symbols"
if: ${{ success() }}
id: tests
- name: Upload test failures
if: ${{ failure() && steps.tests.conclusion == 'failure' }}
uses: actions/upload-artifact@v4
with:
name: mingw-autotools-test-logs-${{ matrix.msystem }}
path: |
*/*.log
*/*.trs
build-and-test-cmake:
runs-on: windows-latest
strategy:
matrix:
msystem: [ MINGW64, UCRT64] #, CLANG64 ]
defaults:
run:
shell: msys2 {0}
steps:
- uses: actions/checkout@v4
- uses: msys2/setup-msys2@v2
with:
msystem: ${{ matrix.msystem }}
update: true
pacboy: cc:p cmake:p hdf5:p curl:p libxml2:p zlib:p blosc:p bzip2:p
install: make m4 diffutils git unzip
###
# Configure and build
###
- name: (CMake) Configure Build
run: |
LDFLAGS="-Wl,--export-all-symbols" \
cmake \
-G"MSYS Makefiles" \
-B build \
-S . \
-DCMAKE_INSTALL_PREFIX=${MINGW_PREFIX} \
-DBUILD_SHARED_LIBS=ON \
-DNETCDF_ENABLE_NETCDF_4=ON \
-DNETCDF_ENABLE_DAP=ON \
-DNETCDF_BUILD_UTILITIES=ON \
-DNETCDF_ENABLE_TESTS=ON \
-DNETCDF_ENABLE_HDF5=ON \
-DNETCDF_ENABLE_DAP=TRUE \
-DNETCDF_ENABLE_NCZARR=TRUE \
-DNETCDF_ENABLE_DAP_LONG_TESTS=TRUE \
-DNETCDF_ENABLE_PLUGINS=ON
if: ${{ success() }}
- name: (CMake) Look at CMakeCache.txt if error
run: cat build/CMakeCache.txt
if: ${{ failure() }}
- name: (CMake) Print Summary
run: cat build/libnetcdf.settings
- name: (CMake) Build All
run: cmake --build build -j$(nproc)
if: ${{ success() }}
- name: (CMake) Run Tests
run: PATH=$PWD/build:$PATH ctest --test-dir build
if: ${{ success() }}
- name: (CMake) Verbose output of CTest failures
run: >-
PATH=$PWD/build:$PATH ctest --test-dir build --output-on-failure -j$(nproc) --rerun-failed -VV
if: ${{ failure() }}