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@UtrechtUniversity

Utrecht University

The central place for managing code and software for Utrecht University researchers and employees

Welcome to Utrecht University 👋

Welcome at GitHub@UtrechtUniversity! At Utrecht University, we believe that with open minds, open attitudes and open science, we can create solutions that positively impact us all. Nowadays, technology, data, and software are important cornerstones of these solutions. This GitHub is our place where we, academic and administrative staff, develop and share research code, software, and others. You are invited to contribute to the projects and join forces to a better world.

🔑 I work at Utrecht University and want access!
🔑 I study at Utrecht University and want to use GitHub!

    To apply for student benefits (Student Developer pack, GitHub Pro and GitHub Copilot), request your Student Developer pack directly via GitHub Education.

    Do you have no experience with Git and GitHub? There are lots of resources on the internet to learn working with Git and GitHub. Check our best practices repository as a starting point.

    Students are not eligible to become a full member of github.com/UtrechtUniversity, but can be invited as 'outside collaborators' to project Repositories by repository admins (e.g. the creator of a repository). Repository admins can grant students full access to the repository including write and admin permissions, when required.

Our projects

Every year, researchers at Utrecht University publish thousands of scientific results via various outlets. Research code and software is published on GitHub@UtrechtUniversity as well as other locations such as scientific repositories and personal GitHub accounts. To find interesting code and software published by Utrecht University, have a look at:

Featured projects this week

          

These are featured projects. How can I have my project featured?

Contributing

At Utrecht University, we love 💛 Open Science. This means that we are welcoming contributions to our projects at Utrecht University. Are you interested in contributing? Cool! Do you need help? We can help you get started! Open source software is made by people just like you. Learn more about how to contribute.

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  1. getting-started getting-started Public

    Getting started with GitHub @UtrechtUniversity

    14 4

  2. best-practices best-practices Public

    Best practices for git, GitHub, and research software development. Tailored for researchers of Utrecht University

    10 2

  3. awesome-utrecht-university awesome-utrecht-university Public

    A curated list of awesome open source projects from Utrecht University.

    Python 53 14

  4. yoda yoda Public

    A system for reliable, long-term storing and archiving large amounts of research data during all stages of a study.

    HTML 47 27

  5. SWORDS-UU SWORDS-UU Public

    Implementation of the SWORDS framework for Utrecht University.

    Jupyter Notebook 8 5

  6. SWORDS-template SWORDS-template Public template

    Template to implement the SWORDS framework for your organisation

    Python 4 5

Repositories

Showing 10 of 272 repositories
  • yoda-ruleset Public

    iRODS ruleset and policies for Yoda: https://github.com/UtrechtUniversity/yoda

    UtrechtUniversity/yoda-ruleset’s past year of commit activity
    Python 9 GPL-3.0 13 0 4 Updated Dec 24, 2024
  • FSW-Openshift Public
    UtrechtUniversity/FSW-Openshift’s past year of commit activity
    CSS 0 0 0 6 Updated Dec 23, 2024
  • ricgraph Public

    Ricgraph - Research in context graph

    UtrechtUniversity/ricgraph’s past year of commit activity
    Python 28 MIT 4 0 0 Updated Dec 23, 2024
  • ibridges-ansible Public

    Ansible modules for syncing data with iRODS using iBridges.

    UtrechtUniversity/ibridges-ansible’s past year of commit activity
    Python 1 MIT 0 4 1 Updated Dec 23, 2024
  • yoda-external-user-service Public

    A service that provides for external user enrollment and external user management via a HTTP API for Yoda: https://github.com/UtrechtUniversity/yoda

    UtrechtUniversity/yoda-external-user-service’s past year of commit activity
    Python 1 GPL-3.0 1 0 0 Updated Dec 20, 2024
  • yoda-web-mock Public

    Mocks for web services that Yoda depends on.

    UtrechtUniversity/yoda-web-mock’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Dec 20, 2024
  • UtrechtUniversity/yoda-portal’s past year of commit activity
    JavaScript 10 GPL-3.0 13 0 4 Updated Dec 20, 2024
  • yoda Public

    A system for reliable, long-term storing and archiving large amounts of research data during all stages of a study.

    UtrechtUniversity/yoda’s past year of commit activity
    HTML 47 GPL-3.0 27 48 4 Updated Dec 20, 2024
  • yoda-clienttools Public

    Client-side Yoda tools - mainly intended for data managers and key users

    UtrechtUniversity/yoda-clienttools’s past year of commit activity
    Python 1 GPL-3.0 2 0 0 Updated Dec 20, 2024
  • irods-consistency-check Public

    Check consistency between irods resource and on-disk vault.

    UtrechtUniversity/irods-consistency-check’s past year of commit activity
    Python 2 GPL-3.0 3 0 0 Updated Dec 20, 2024