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Merge pull request #85 from WorldHealthOrganization/cleanup
Add in updates for Hepatitis B and Polio into the main branch
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| *.jar | ||
| .DS_Store | ||
| **/tests-*-bundle.json | ||
| node_modules/ | ||
| outputs/* | ||
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| /* | ||
| * Library: IMMZD2DTHepatitisB3Delayed (IMMZ.D2.DT.Hepatitis B.Delayed start) | ||
| * Rule: Determine if the client is due for a hepatitis B vaccination according to the national immunization schedule | ||
| * Decision Table: 3-dose schedule (no birth dose + 3 doses), delayed start | ||
| * Trigger: IMMZ.D2 Determine required vaccination(s) if any | ||
| */ | ||
| library IMMZD2DTHepatitisB3Delayed | ||
| // Start Skeleton CQL | ||
| using FHIR version '4.0.1' | ||
| include FHIRHelpers version '4.0.1' | ||
| include IMMZCommon called IMMZCom | ||
| include IMMZConcepts called IMMZc | ||
| include IMMZConfig called IMMZCon | ||
| include IMMZVaccineLibrary called IMMZvl | ||
| include FHIRCommon called FC | ||
| include IMMZD2DTHepatitisBInput called input | ||
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| // End Skeleton CQL | ||
| context Patient | ||
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| /* | ||
| @dynamicValue: Guidance | ||
| */ | ||
| define "Guidance": | ||
| case | ||
| when "Client is due for hepatitis B vaccination" then "Client is due for hepatitis B vaccination Guidance" | ||
| when "Client is not due for a hepatitis B vaccination" then "Client is not due for a hepatitis B vaccination Guidance" | ||
| when "Client is due for a hepatitis B vaccination" then "Client is due for a hepatitis B vaccination Guidance" | ||
| when "Hepatitis B immunization schedule is complete" then "Hepatitis B immunization schedule is complete Guidance" | ||
| else '' | ||
| end | ||
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| /* | ||
| @output: Client is due for hepatitis B vaccination | ||
| @pseudocode: "Immunization recommendation status" = "Due" | ||
| */ | ||
| define "Client is due for hepatitis B vaccination": | ||
| input."No hepatitis B doses were administered" | ||
| and input."Client's age is more than {Member States defined upper limit}" | ||
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| /* | ||
| @output: Client is due for hepatitis B vaccination Guidance | ||
| @guidance: Should vaccinate client for first hepatitis B dose as hepatitis B birth dose was not administered. The first hepatitis B dose should be administered as soon as possible. Check for contraindications. | ||
| */ | ||
| define "Client is due for hepatitis B vaccination Guidance": | ||
| 'Should vaccinate client for first hepatitis B dose as hepatitis B birth dose was not administered. The first hepatitis B dose should be administered as soon as possible. Check for contraindications.' | ||
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| /* | ||
| @output: Client is not due for a hepatitis B vaccination Case 1 | ||
| @pseudocode: "Immunization recommendation status" = "Not due" | ||
| */ | ||
| define "Client is not due for a hepatitis B vaccination Case 1": | ||
| input."One hepatitis B dose was administered" | ||
| and input."The latest hepatitis B dose was administered less than 4 weeks ago" | ||
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| /* | ||
| @output: Client is not due for a hepatitis B vaccination Case 2 | ||
| @pseudocode: "Immunization recommendation status" = "Not due" | ||
| */ | ||
| define "Client is not due for a hepatitis B vaccination Case 2": | ||
| input."Two hepatitis B doses were administered" | ||
| and input."The latest hepatitis B dose was administered less than 4 weeks ago" | ||
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| /* | ||
| @output: Client is not due for a hepatitis B vaccination Case 3 | ||
| @pseudocode: "Immunization recommendation status" = "Not due" | ||
| */ | ||
| define "Client is not due for a hepatitis B vaccination Case 3": | ||
| input."Two hepatitis B doses were administered" | ||
| and input."The latest hepatitis B dose was administered more than 4 weeks ago" | ||
| and input."The first hepatitis B dose was administered less than 6 months ago" | ||
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| /* | ||
| @output: Client is not due for a hepatitis B vaccination | ||
| @pseudocode: "Immunization recommendation status" = "Not due" | ||
| */ | ||
| define "Client is not due for a hepatitis B vaccination": | ||
| "Client is not due for a hepatitis B vaccination Case 1" | ||
| or "Client is not due for a hepatitis B vaccination Case 2" | ||
| or "Client is not due for a hepatitis B vaccination Case 3" | ||
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| /* | ||
| @output: Client is not due for a hepatitis B vaccination Guidance | ||
| @guidance: Should not vaccinate client for second hepatitis B dose as the latest hepatitis B dose was administered less than 4 weeks ago. Check for any other vaccines due, and inform the caregiver of when to come back for the next dose. | ||
| @guidance: Should not vaccinate client for second hepatitis B dose as the latest hepatitis B dose was administered less than 4 weeks ago. Two hepatitis B doses have been administered to the client. Check for any other vaccines due, and inform the caregiver of when to come back for the next dose. | ||
| @guidance: Should not vaccinate client for third hepatitis B dose as the first hepatitis B dose was administered less than 6 months ago. Check for any other vaccines due, and inform the caregiver of when to come back for the next dose. | ||
| */ | ||
| define "Client is not due for a hepatitis B vaccination Guidance": | ||
| case | ||
| when "Client is not due for a hepatitis B vaccination Case 1" then 'Should not vaccinate client for second hepatitis B dose as the latest hepatitis B dose was administered less than 4 weeks ago. Check for any other vaccines due, and inform the caregiver of when to come back for the next dose.' | ||
| when "Client is not due for a hepatitis B vaccination Case 2" then 'Should not vaccinate client for second hepatitis B dose as the latest hepatitis B dose was administered less than 4 weeks ago. Two hepatitis B doses have been administered to the client. Check for any other vaccines due, and inform the caregiver of when to come back for the next dose.' | ||
| when "Client is not due for a hepatitis B vaccination Case 3" then 'Should not vaccinate client for third hepatitis B dose as the first hepatitis B dose was administered less than 6 months ago. Check for any other vaccines due, and inform the caregiver of when to come back for the next dose.' | ||
| else '' | ||
| end | ||
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| /* | ||
| @output: Client is due for a hepatitis B vaccination Case 1 | ||
| @pseudocode: "Immunization recommendation status" = "Due" | ||
| */ | ||
| define "Client is due for a hepatitis B vaccination Case 1": | ||
| input."One hepatitis B dose was administered" | ||
| and input."The latest hepatitis B dose was administered more than 4 weeks ago" | ||
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| /* | ||
| @output: Client is due for a hepatitis B vaccination Case 2 | ||
| @pseudocode: "Immunization recommendation status" = "Due" | ||
| */ | ||
| define "Client is due for a hepatitis B vaccination Case 2": | ||
| input."Two hepatitis B doses were administered" | ||
| and input."The latest hepatitis B dose was administered more than 4 weeks ago" | ||
| and input."The first hepatitis B dose was administered more than 6 months ago" | ||
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| /* | ||
| @output: Client is due for a hepatitis B vaccination | ||
| @pseudocode: "Immunization recommendation status" = "Due" | ||
| */ | ||
| define "Client is due for a hepatitis B vaccination": | ||
| "Client is due for a hepatitis B vaccination Case 1" | ||
| or "Client is due for a hepatitis B vaccination Case 2" | ||
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| /* | ||
| @output: Client is due for a hepatitis B vaccination Guidance | ||
| @guidance: Should vaccinate client for second hepatitis B dose as the latest hepatitis B dose was administered less than 4 weeks ago. Check for contraindications. | ||
| @guidance: Should vaccinate client for third hepatitis B dose as the first hepatitis B dose was administered more than 6 months ago and the latest hepatitis B dose was administered more than 4 weeks ago. Check for contraindications. | ||
| */ | ||
| define "Client is due for a hepatitis B vaccination Guidance": | ||
| case | ||
| when "Client is due for a hepatitis B vaccination Case 1" then 'Should vaccinate client for second hepatitis B dose as the latest hepatitis B dose was administered less than 4 weeks ago. Check for contraindications.' | ||
| when "Client is due for a hepatitis B vaccination Case 2" then 'Should vaccinate client for third hepatitis B dose as the first hepatitis B dose was administered more than 6 months ago and the latest hepatitis B dose was administered more than 4 weeks ago. Check for contraindications.' | ||
| else '' | ||
| end | ||
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| /* | ||
| @output: Hepatitis B immunization schedule is complete | ||
| @pseudocode: | ||
| */ | ||
| define "Hepatitis B immunization schedule is complete": | ||
| input."Three hepatitis B doses were administered" | ||
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| /* | ||
| @output: Hepatitis B immunization schedule is complete Guidance | ||
| @guidance: Hepatitis B immunization schedule is complete. Three hepatitis B primary series doses were administered. Check for any other vaccines due. | ||
| */ | ||
| define "Hepatitis B immunization schedule is complete Guidance": | ||
| 'Hepatitis B immunization schedule is complete. Three hepatitis B primary series doses were administered. Check for any other vaccines due.' | ||
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| /* | ||
| @test: Test expected results based on example patients | ||
| */ | ||
| define "Test Validation": | ||
| case | ||
| when Patient.id = '54.D0Amt4w' then "Client is due for hepatitis B vaccination" and "Guidance" = 'Should vaccinate client for first hepatitis B dose as hepatitis B birth dose was not administered. The first hepatitis B dose should be administered as soon as possible. Check for contraindications.' | ||
| when Patient.id = '55.D1Hlt4w' then "Client is not due for a hepatitis B vaccination Case 1" and "Guidance" = 'Should not vaccinate client for second hepatitis B dose as the latest hepatitis B dose was administered less than 4 weeks ago. Check for any other vaccines due, and inform the caregiver of when to come back for the next dose.' | ||
| when Patient.id = '56.D1Hgt4w' then "Client is due for a hepatitis B vaccination Case 1" and "Guidance" = 'Should vaccinate client for second hepatitis B dose as the latest hepatitis B dose was administered less than 4 weeks ago. Check for contraindications.' | ||
| when Patient.id = '57.D2Hlt4w' then "Client is not due for a hepatitis B vaccination Case 2" and "Guidance" = 'Should not vaccinate client for second hepatitis B dose as the latest hepatitis B dose was administered less than 4 weeks ago. Two hepatitis B doses have been administered to the client. Check for any other vaccines due, and inform the caregiver of when to come back for the next dose.' | ||
| when Patient.id = '58.D2Hgt4wFlt6m' then "Client is not due for a hepatitis B vaccination Case 3" and "Guidance" = 'Should not vaccinate client for third hepatitis B dose as the first hepatitis B dose was administered less than 6 months ago. Check for any other vaccines due, and inform the caregiver of when to come back for the next dose.' | ||
| when Patient.id = '59.D2Hgt4wFgt6m' then "Client is due for a hepatitis B vaccination Case 2" and "Guidance" = 'Should vaccinate client for third hepatitis B dose as the first hepatitis B dose was administered more than 6 months ago and the latest hepatitis B dose was administered more than 4 weeks ago. Check for contraindications.' | ||
| when Patient.id = '60.D3' then "Hepatitis B immunization schedule is complete" and "Guidance" = 'Hepatitis B immunization schedule is complete. Three hepatitis B primary series doses were administered. Check for any other vaccines due.' | ||
| else 'No test case set' | ||
| end |
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